FFCP PHASE1:Hg19::chr15:66994561..66994597,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:66994561..66994597,+
|short_description=p2@SMAD6
|description=CAGE_peak_2_at_SMAD6_5end
|association_with_transcript=-72bp_to_ENST00000288840_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4091 | |EntrezGene=4091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6772 | |HGNC=6772 | ||
|TSSclassifier=strong | |||
|UniProt=O43541 | |UniProt=O43541 | ||
|association_with_transcript=-72bp_to_ENST00000288840_5end | |||
|cluster_id=chr15:66994561..66994597,+ | |||
|coexpression_cluster_id=C3505 | |||
|description=CAGE_peak_2_at_SMAD6_5end | |||
|id=chr15:66994561..66994597,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.83e-10!180;CL:0002078!9.05e-08!44;CL:0000213!3.29e-07!57;CL:0000215!3.29e-07!57;CL:0000057!4.19e-07!75;CL:0000222!4.62e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,5.34e-08,45;CL:0000136,4.67e-07,15;CL:0000213,5.05e-07,58;CL:0000215,5.05e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.66e-15!118;UBERON:0000477!2.07e-14!286;UBERON:0000025!7.33e-12!194;UBERON:0000481!1.40e-11!347;UBERON:0000468!1.67e-11!659;UBERON:0004111!1.08e-10!241;UBERON:0000475!7.14e-10!365;UBERON:0002417!1.16e-09!61;UBERON:0000916!1.16e-09!61;UBERON:0000119!3.31e-09!312;UBERON:0000483!3.57e-09!309;UBERON:0003103!5.30e-09!69;UBERON:0004872!5.40e-09!84;UBERON:0009569!5.59e-09!113;UBERON:0002100!1.85e-08!216;UBERON:0000467!3.75e-08!625;UBERON:0000480!4.90e-08!626;UBERON:0005172!8.72e-08!55;UBERON:0005173!8.72e-08!55;UBERON:0000062!2.39e-07!511;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0002049!7.15e-07!79;UBERON:0007798!7.15e-07!79;UBERON:0007100!7.22e-07!27 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.10e-14,117;UBERON:0000025,3.54e-10,192;UBERON:0002417,2.01e-09,60;UBERON:0000916,2.01e-09,60;UBERON:0003103,6.16e-09,68;UBERON:0004111,7.62e-09,240;UBERON:0009569,1.29e-08,112;UBERON:0004872,3.57e-08,83;UBERON:0000483,8.20e-08,306;UBERON:0000119,9.96e-08,309;UBERON:0005172,1.86e-07,54;UBERON:0005173,1.86e-07,54;UBERON:0002100,2.02e-07,199;UBERON:0007100,6.02e-07,27;UBERON:0003104,7.23e-07,160;UBERON:0009142,7.23e-07,160 | |||
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| ||
|short_description=p2@SMAD6 | |||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p2@SMAD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMAD6_5end |
Coexpression cluster: | C3505_Cardiac_Retinal_lung_Chondrocyte_Synoviocyte_tenocyte_seminal |
Association with transcript: | -72bp_to_ENST00000288840_5end |
EntrezGene: | SMAD6 |
HGNC: | 6772 |
UniProt: | O43541 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 5.34e-08 | 45 |
fat cell | 4.67e-07 | 15 |
lining cell | 5.05e-07 | 58 |
barrier cell | 5.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.10e-14 | 117 |
tube | 3.54e-10 | 192 |
abdominal segment of trunk | 2.01e-09 | 60 |
abdomen | 2.01e-09 | 60 |
compound organ | 6.16e-09 | 68 |
anatomical conduit | 7.62e-09 | 240 |
subdivision of trunk | 1.29e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 3.57e-08 | 83 |
epithelium | 8.20e-08 | 306 |
cell layer | 9.96e-08 | 309 |
abdomen element | 1.86e-07 | 54 |
abdominal segment element | 1.86e-07 | 54 |
trunk | 2.02e-07 | 199 |
primary circulatory organ | 6.02e-07 | 27 |
mesenchyme | 7.23e-07 | 160 |
entire embryonic mesenchyme | 7.23e-07 | 160 |