FFCP PHASE1:Hg19::chr6:28891688..28891700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5987 | |EntrezGene=5987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9975 | |HGNC=9975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481474_5end | |association_with_transcript=0bp_to_ENST00000481474_5end | ||
|cluster_id=chr6:28891688..28891700,- | |||
|description=CAGE_peak_4_at_TRIM27_5end | |description=CAGE_peak_4_at_TRIM27_5end | ||
|id=chr6:28891688..28891700,- | |id=chr6:28891688..28891700,- | ||
|ontology_enrichment_celltype=CL:0000222!1.18e-11!119;CL:0000548!7.47e-11!679;CL:0000004!7.47e-11!679;CL:0000255!7.47e-11!679;CL:0000012!2.65e-10!682;CL:0000003!4.46e-10!722;CL:0000213!2.98e-09!57;CL:0000215!2.98e-09!57;CL:0000115!5.95e-09!35;CL:0002078!1.27e-08!44;CL:0000220!4.84e-08!246;CL:0002321!1.09e-07!248;CL:0000144!3.34e-07!625;CL:0002371!8.08e-07!591 | |ontology_enrichment_celltype=CL:0000222!1.18e-11!119;CL:0000548!7.47e-11!679;CL:0000004!7.47e-11!679;CL:0000255!7.47e-11!679;CL:0000012!2.65e-10!682;CL:0000003!4.46e-10!722;CL:0000213!2.98e-09!57;CL:0000215!2.98e-09!57;CL:0000115!5.95e-09!35;CL:0002078!1.27e-08!44;CL:0000220!4.84e-08!246;CL:0002321!1.09e-07!248;CL:0000144!3.34e-07!625;CL:0002371!8.08e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.78e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.02e-11,121;CL:0000115,1.76e-09,36;CL:0000213,2.57e-09,58;CL:0000215,2.57e-09,58;CL:0002078,9.18e-09,45;CL:0002139,8.15e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.07e-09!110;UBERON:0001009!9.45e-09!113;UBERON:0003914!3.02e-08!118;UBERON:0002049!4.27e-08!79;UBERON:0007798!4.27e-08!79;UBERON:0000055!2.22e-07!69 | |ontology_enrichment_uberon=UBERON:0004535!3.07e-09!110;UBERON:0001009!9.45e-09!113;UBERON:0003914!3.02e-08!118;UBERON:0002049!4.27e-08!79;UBERON:0007798!4.27e-08!79;UBERON:0000055!2.22e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.17e-09,109;UBERON:0001009,1.27e-08,112;UBERON:0002049,3.84e-08,78;UBERON:0007798,3.84e-08,78;UBERON:0003914,4.47e-08,117;UBERON:0000055,1.60e-07,68 | |||
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| ||
|short_description=p4@TRIM27 | |short_description=p4@TRIM27 | ||
}} | }} |
Latest revision as of 13:29, 17 September 2015
Short description: | p4@TRIM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481474_5end |
EntrezGene: | TRIM27 |
HGNC: | 9975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.02e-11 | 121 |
endothelial cell | 1.76e-09 | 36 |
lining cell | 2.57e-09 | 58 |
barrier cell | 2.57e-09 | 58 |
meso-epithelial cell | 9.18e-09 | 45 |
endothelial cell of vascular tree | 8.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.17e-09 | 109 |
circulatory system | 1.27e-08 | 112 |
vasculature | 3.84e-08 | 78 |
vascular system | 3.84e-08 | 78 |
epithelial tube | 4.47e-08 | 117 |
vessel | 1.60e-07 | 68 |