FFCP PHASE1:Hg19::chr6:169691363..169691375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:169691363..169691375,- | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_at_chr6:169691363..169691375,- | |description=CAGE_peak_at_chr6:169691363..169691375,- | ||
|id=chr6:169691363..169691375,- | |id=chr6:169691363..169691375,- | ||
|ontology_enrichment_celltype=CL:0002583!3.27e-10!2;CL:0000322!1.93e-07!3;CL:0002580!2.63e-07!3;CL:0002334!6.74e-07!12 | |ontology_enrichment_celltype=CL:0002583!3.27e-10!2;CL:0000322!1.93e-07!3;CL:0002580!2.63e-07!3;CL:0002334!6.74e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000322;5.96e-34;3!CL:0000083;5.56e-26;4!CL:0002202;2.45e-12;9!CL:0002632;2.45e-12;9!CL:0002368;5.70e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,5.96e-34,3;CL:0000083,5.56e-26,4;CL:0002202,2.45e-12,9;CL:0002632,2.45e-12,9;CL:0002368,5.70e-09,13;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.56e-19!1;DOID:4549!1.56e-19!1;DOID:5861!1.56e-19!1;DOID:6496!1.56e-19!1;DOID:4074!1.43e-10!2;DOID:4905!1.43e-10!2;DOID:3498!1.43e-10!2;DOID:3910!1.57e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.74e-50;2!DOID:4905;2.74e-50;2!DOID:3498;2.74e-50;2!DOID:3910;4.52e-50;2!DOID:1793;5.56e-26;4!DOID:3908;5.15e-21;5!DOID:170;7.67e-18;6!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.74e-50,2;DOID:4905,2.74e-50,2;DOID:3498,2.74e-50,2;DOID:3910,4.52e-50,2;DOID:1793,5.56e-26,4;DOID:3908,5.15e-21,5;DOID:170,7.67e-18,6;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.57e-10!2;UBERON:0002173!1.57e-10!2;UBERON:0002186!1.57e-10!2;UBERON:0004821!1.93e-07!3;UBERON:0003215!1.93e-07!3;UBERON:0002299!1.93e-07!3;UBERON:0006524!1.93e-07!3;UBERON:0008874!1.93e-07!3;UBERON:0002169!1.93e-07!3;UBERON:0004894!1.93e-07!3;UBERON:0002418!2.19e-07!3;UBERON:0004755!2.19e-07!3 | |ontology_enrichment_uberon=UBERON:0004903!1.57e-10!2;UBERON:0002173!1.57e-10!2;UBERON:0002186!1.57e-10!2;UBERON:0004821!1.93e-07!3;UBERON:0003215!1.93e-07!3;UBERON:0002299!1.93e-07!3;UBERON:0006524!1.93e-07!3;UBERON:0008874!1.93e-07!3;UBERON:0002169!1.93e-07!3;UBERON:0004894!1.93e-07!3;UBERON:0002418!2.19e-07!3;UBERON:0004755!2.19e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.52e-50;2!UBERON:0002173;4.52e-50;2!UBERON:0002186;4.52e-50;2!UBERON:0004821;5.96e-34;3!UBERON:0007499;5.96e-34;3!UBERON:0003215;5.96e-34;3!UBERON:0010368;5.96e-34;3!UBERON:0009911;5.96e-34;3!UBERON:0002299;5.96e-34;3!UBERON:0006524;5.96e-34;3!UBERON:0008874;5.96e-34;3!UBERON:0002169;5.96e-34;3!UBERON:0004894;5.96e-34;3!UBERON:0009856;7.14e-26;4!UBERON:0001264;2.73e-11;10!UBERON:0000058;3.02e-11;10!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.52e-50,2;UBERON:0002173,4.52e-50,2;UBERON:0002186,4.52e-50,2;UBERON:0004821,5.96e-34,3;UBERON:0003215,5.96e-34,3;UBERON:0010368,5.96e-34,3;UBERON:0009911,5.96e-34,3;UBERON:0002299,5.96e-34,3;UBERON:0006524,5.96e-34,3;UBERON:0008874,5.96e-34,3;UBERON:0002169,5.96e-34,3;UBERON:0004894,5.96e-34,3;UBERON:0001264,2.73e-11,10;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p@chr6:169691363..169691375,- | |short_description=p@chr6:169691363..169691375,- | ||
}} | }} |
Latest revision as of 22:17, 30 July 2015
Short description: | p@chr6:169691363..169691375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169691363..169691375, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 5.96e-34 | 3 |
epithelial cell of pancreas | 5.56e-26 | 4 |
epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
respiratory epithelial cell | 5.70e-09 | 13 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.52e-50 | 2 |
alveolar duct | 4.52e-50 | 2 |
bronchiole | 4.52e-50 | 2 |
pulmonary alveolus epithelium | 5.96e-34 | 3 |
alveolus | 5.96e-34 | 3 |
pulmonary lobule | 5.96e-34 | 3 |
lobule | 5.96e-34 | 3 |
alveolus of lung | 5.96e-34 | 3 |
alveolar system | 5.96e-34 | 3 |
pulmonary acinus | 5.96e-34 | 3 |
alveolar sac | 5.96e-34 | 3 |
alveolar wall | 5.96e-34 | 3 |
pancreas | 2.73e-11 | 10 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.74e-50 | 2 |
pancreatic carcinoma | 2.74e-50 | 2 |
pancreatic ductal adenocarcinoma | 2.74e-50 | 2 |
lung adenocarcinoma | 4.52e-50 | 2 |
pancreatic cancer | 5.56e-26 | 4 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
endocrine gland cancer | 7.67e-18 | 6 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |