FFCP PHASE1:Hg19::chr6:161412883..161412894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4216 | |EntrezGene=4216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6856 | |HGNC=6856 | ||
|TSSclassifier=strong | |||
|UniProt=F5H443 | |UniProt=F5H443 | ||
|association_with_transcript=0bp_to_ENST00000544209_5end | |association_with_transcript=0bp_to_ENST00000544209_5end | ||
|cluster_id=chr6:161412883..161412894,+ | |||
|description=CAGE_peak_3_at_MAP3K4_5end | |description=CAGE_peak_3_at_MAP3K4_5end | ||
|id=chr6:161412883..161412894,+ | |id=chr6:161412883..161412894,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.54e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.88e-08,25;CL:0000827,4.88e-08,25;CL:0000064,6.79e-07,3;CL:0000067,6.79e-07,3;CL:0005012,6.79e-07,3;CL:0002304,6.79e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.16e-15!82;UBERON:0000073!5.23e-14!94;UBERON:0001016!5.23e-14!94;UBERON:0005743!6.79e-14!86;UBERON:0001049!2.21e-13!57;UBERON:0005068!2.21e-13!57;UBERON:0006241!2.21e-13!57;UBERON:0007135!2.21e-13!57;UBERON:0000955!1.29e-12!69;UBERON:0006238!1.29e-12!69;UBERON:0003080!3.78e-12!42;UBERON:0002616!3.88e-12!59;UBERON:0007023!4.70e-12!115;UBERON:0002780!6.13e-12!41;UBERON:0001890!6.13e-12!41;UBERON:0006240!6.13e-12!41;UBERON:0002020!2.28e-10!34;UBERON:0003528!2.28e-10!34;UBERON:0001869!3.45e-10!32;UBERON:0001893!4.28e-10!34;UBERON:0002791!1.23e-09!33;UBERON:0000956!3.96e-09!25;UBERON:0000203!3.96e-09!25;UBERON:0003075!4.72e-09!86;UBERON:0007284!4.72e-09!86;UBERON:0002346!6.71e-09!90;UBERON:0001950!2.11e-08!20;UBERON:0002619!5.26e-08!22;UBERON:0000153!6.39e-08!129;UBERON:0007811!6.39e-08!129;UBERON:0003056!1.54e-07!61;UBERON:0004121!6.44e-07!169;UBERON:0000924!6.48e-07!173;UBERON:0006601!6.48e-07!173 | |ontology_enrichment_uberon=UBERON:0001017!2.16e-15!82;UBERON:0000073!5.23e-14!94;UBERON:0001016!5.23e-14!94;UBERON:0005743!6.79e-14!86;UBERON:0001049!2.21e-13!57;UBERON:0005068!2.21e-13!57;UBERON:0006241!2.21e-13!57;UBERON:0007135!2.21e-13!57;UBERON:0000955!1.29e-12!69;UBERON:0006238!1.29e-12!69;UBERON:0003080!3.78e-12!42;UBERON:0002616!3.88e-12!59;UBERON:0007023!4.70e-12!115;UBERON:0002780!6.13e-12!41;UBERON:0001890!6.13e-12!41;UBERON:0006240!6.13e-12!41;UBERON:0002020!2.28e-10!34;UBERON:0003528!2.28e-10!34;UBERON:0001869!3.45e-10!32;UBERON:0001893!4.28e-10!34;UBERON:0002791!1.23e-09!33;UBERON:0000956!3.96e-09!25;UBERON:0000203!3.96e-09!25;UBERON:0003075!4.72e-09!86;UBERON:0007284!4.72e-09!86;UBERON:0002346!6.71e-09!90;UBERON:0001950!2.11e-08!20;UBERON:0002619!5.26e-08!22;UBERON:0000153!6.39e-08!129;UBERON:0007811!6.39e-08!129;UBERON:0003056!1.54e-07!61;UBERON:0004121!6.44e-07!169;UBERON:0000924!6.48e-07!173;UBERON:0006601!6.48e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.48e-20;25!UBERON:0000203;8.48e-20;25!UBERON:0002619;2.80e-18;22!UBERON:0001950;4.67e-18;20!UBERON:0001869;1.04e-15;32!UBERON:0002791;1.20e-14;32!UBERON:0001893;6.92e-14;34!UBERON:0003528;3.84e-13;34!UBERON:0002020;3.84e-13;34!UBERON:0002780;4.09e-11;41!UBERON:0001890;4.09e-11;41!UBERON:0000073;2.05e-09;53!UBERON:0002616;2.05e-09;53!UBERON:0000200;3.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.31e-20,25;UBERON:0000203,4.31e-20,25;UBERON:0002619,2.00e-18,22;UBERON:0001869,2.33e-18,32;UBERON:0001950,3.99e-18,20;UBERON:0001893,5.97e-17,34;UBERON:0002791,1.63e-16,32;UBERON:0002780,6.78e-16,41;UBERON:0001890,6.78e-16,41;UBERON:0003080,6.78e-16,41;UBERON:0006240,6.78e-16,41;UBERON:0003528,3.10e-15,34;UBERON:0002020,3.10e-15,34;UBERON:0001049,4.82e-15,56;UBERON:0005068,4.82e-15,56;UBERON:0006241,4.82e-15,56;UBERON:0007135,4.82e-15,56;UBERON:0003056,6.01e-15,61;UBERON:0001017,6.77e-15,81;UBERON:0000073,7.77e-15,53;UBERON:0002616,7.77e-15,53;UBERON:0001016,1.35e-14,89;UBERON:0003075,3.60e-13,82;UBERON:0007284,3.60e-13,82;UBERON:0000955,5.08e-13,68;UBERON:0006238,5.08e-13,68;UBERON:0002346,3.75e-12,86;UBERON:0010371,2.26e-09,104;UBERON:0004121,1.11e-07,171;UBERON:0000924,1.11e-07,171;UBERON:0006601,1.11e-07,171;UBERON:0000200,2.57e-07,6;UBERON:0001778,6.79e-07,3;UBERON:0001775,6.79e-07,3 | |||
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| ||
|short_description=p3@MAP3K4 | |short_description=p3@MAP3K4 | ||
}} | }} |
Latest revision as of 16:42, 16 September 2015
Short description: | p3@MAP3K4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP3K4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544209_5end |
EntrezGene: | MAP3K4 |
HGNC: | 6856 |
UniProt: | F5H443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.88e-08 | 25 |
pro-T cell | 4.88e-08 | 25 |
ciliated cell | 6.79e-07 | 3 |
ciliated epithelial cell | 6.79e-07 | 3 |
multi-ciliated epithelial cell | 6.79e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.31e-20 | 25 |
pallium | 4.31e-20 | 25 |
regional part of cerebral cortex | 2.00e-18 | 22 |
cerebral hemisphere | 2.33e-18 | 32 |
neocortex | 3.99e-18 | 20 |
telencephalon | 5.97e-17 | 34 |
regional part of telencephalon | 1.63e-16 | 32 |
regional part of forebrain | 6.78e-16 | 41 |
forebrain | 6.78e-16 | 41 |
anterior neural tube | 6.78e-16 | 41 |
future forebrain | 6.78e-16 | 41 |
brain grey matter | 3.10e-15 | 34 |
gray matter | 3.10e-15 | 34 |
neural tube | 4.82e-15 | 56 |
neural rod | 4.82e-15 | 56 |
future spinal cord | 4.82e-15 | 56 |
neural keel | 4.82e-15 | 56 |
pre-chordal neural plate | 6.01e-15 | 61 |
central nervous system | 6.77e-15 | 81 |
regional part of nervous system | 7.77e-15 | 53 |
regional part of brain | 7.77e-15 | 53 |
nervous system | 1.35e-14 | 89 |
neural plate | 3.60e-13 | 82 |
presumptive neural plate | 3.60e-13 | 82 |
brain | 5.08e-13 | 68 |
future brain | 5.08e-13 | 68 |
neurectoderm | 3.75e-12 | 86 |
ecto-epithelium | 2.26e-09 | 104 |
ectoderm-derived structure | 1.11e-07 | 171 |
ectoderm | 1.11e-07 | 171 |
presumptive ectoderm | 1.11e-07 | 171 |
gyrus | 2.57e-07 | 6 |
ciliary epithelium | 6.79e-07 | 3 |
ciliary body | 6.79e-07 | 3 |