FFCP PHASE1:Hg19::chr6:159071097..159071104,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt=F5H278 | |UniProt=F5H278 | ||
|association_with_transcript=11bp_to_ENST00000543689_5end | |association_with_transcript=11bp_to_ENST00000543689_5end | ||
|cluster_id=chr6:159071097..159071104,+ | |||
|coexpression_cluster_id=C4200 | |||
|description=CAGE_peak_9_at_SYTL3_5end | |description=CAGE_peak_9_at_SYTL3_5end | ||
|id=chr6:159071097..159071104,+ | |id=chr6:159071097..159071104,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.20e-51!140;CL:0000988!2.08e-41!182;CL:0000037!2.81e-41!172;CL:0000566!2.81e-41!172;CL:0002032!2.07e-37!165;CL:0000837!2.07e-37!165;CL:0002031!3.97e-35!124;CL:0002087!1.58e-33!119;CL:0002057!1.10e-28!42;CL:0000766!3.68e-28!76;CL:0000860!5.59e-26!45;CL:0000791!1.66e-23!18;CL:0000789!1.66e-23!18;CL:0002420!1.66e-23!18;CL:0002419!1.66e-23!18;CL:0000790!1.66e-23!18;CL:0000763!9.86e-23!112;CL:0000049!9.86e-23!112;CL:0000084!2.29e-21!25;CL:0000827!2.29e-21!25;CL:0000557!2.69e-21!71;CL:0000839!5.30e-19!70;CL:0002009!7.08e-19!65;CL:0002194!4.41e-17!63;CL:0000576!4.41e-17!63;CL:0000040!4.41e-17!63;CL:0000559!4.41e-17!63;CL:0000625!9.48e-15!11;CL:0000838!8.31e-14!52;CL:0000542!2.23e-13!53;CL:0000051!2.23e-13!53;CL:0000094!2.51e-12!8;CL:0000081!1.36e-10!11;CL:0000134!2.98e-10!358;CL:0002320!5.48e-10!365;CL:0000624!1.66e-09!6;CL:0000080!3.97e-09!6;CL:0000219!5.24e-08!390;CL:0000451!6.06e-08!10 | |ontology_enrichment_celltype=CL:0000738!1.20e-51!140;CL:0000988!2.08e-41!182;CL:0000037!2.81e-41!172;CL:0000566!2.81e-41!172;CL:0002032!2.07e-37!165;CL:0000837!2.07e-37!165;CL:0002031!3.97e-35!124;CL:0002087!1.58e-33!119;CL:0002057!1.10e-28!42;CL:0000766!3.68e-28!76;CL:0000860!5.59e-26!45;CL:0000791!1.66e-23!18;CL:0000789!1.66e-23!18;CL:0002420!1.66e-23!18;CL:0002419!1.66e-23!18;CL:0000790!1.66e-23!18;CL:0000763!9.86e-23!112;CL:0000049!9.86e-23!112;CL:0000084!2.29e-21!25;CL:0000827!2.29e-21!25;CL:0000557!2.69e-21!71;CL:0000839!5.30e-19!70;CL:0002009!7.08e-19!65;CL:0002194!4.41e-17!63;CL:0000576!4.41e-17!63;CL:0000040!4.41e-17!63;CL:0000559!4.41e-17!63;CL:0000625!9.48e-15!11;CL:0000838!8.31e-14!52;CL:0000542!2.23e-13!53;CL:0000051!2.23e-13!53;CL:0000094!2.51e-12!8;CL:0000081!1.36e-10!11;CL:0000134!2.98e-10!358;CL:0002320!5.48e-10!365;CL:0000624!1.66e-09!6;CL:0000080!3.97e-09!6;CL:0000219!5.24e-08!390;CL:0000451!6.06e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.55e-36;18!CL:0000789;6.55e-36;18!CL:0002419;6.55e-36;18!CL:0000084;8.09e-33;25!CL:0000094;1.55e-28;8!CL:0000081;1.44e-25;11!CL:0000624;1.08e-21;6!CL:0000625;2.47e-19;11!CL:0000542;7.74e-13;53!CL:0000898;1.19e-12;3!CL:0000775;6.04e-12;3!CL:0000623;1.25e-11;3!CL:0000226;1.70e-11;3!CL:0000842;1.70e-11;3!CL:0000767;1.86e-11;3!CL:0000815;4.30e-09;2!CL:0000792;4.30e-09;2!CL:0002677;4.30e-09;2!CL:0000771;1.34e-08;2!CL:0000738;1.41e-07;136!CL:0002087;3.23e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.82e-36,136;CL:0000791,5.43e-36,18;CL:0000789,5.43e-36,18;CL:0002420,5.43e-36,18;CL:0002419,5.43e-36,18;CL:0000790,5.43e-36,18;CL:0000084,5.94e-33,25;CL:0000827,5.94e-33,25;CL:0000988,2.08e-30,177;CL:0000094,1.04e-28,8;CL:0000037,1.59e-27,168;CL:0000081,1.10e-25,11;CL:0002032,9.13e-23,161;CL:0000837,9.13e-23,161;CL:0000838,1.74e-22,52;CL:0000542,5.77e-22,53;CL:0000051,5.77e-22,53;CL:0000624,1.40e-21,6;CL:0002087,7.83e-20,115;CL:0000625,1.74e-19,11;CL:0002031,8.44e-19,120;CL:0000898,1.11e-12,3;CL:0000775,4.94e-12,3;CL:0000623,1.23e-11,3;CL:0000825,1.23e-11,3;CL:0000767,1.83e-11,3;CL:0000226,2.19e-11,3;CL:0000842,2.19e-11,3;CL:0000766,5.40e-10,72;CL:0000815,4.31e-09,2;CL:0000792,4.31e-09,2;CL:0002677,4.31e-09,2;CL:0000771,1.11e-08,2;CL:0000134,4.94e-08,354;CL:0002320,1.07e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;6.55e-36;18!CL:0000051;7.74e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.11e-30!102;UBERON:0003061!3.11e-30!102;UBERON:0002193!5.54e-27!112;UBERON:0002371!1.58e-19!80;UBERON:0001474!3.17e-17!86;UBERON:0002405!5.71e-15!115;UBERON:0004765!9.46e-13!101;UBERON:0001434!9.46e-13!101;UBERON:0002384!4.50e-09!375;UBERON:0000178!8.63e-08!15;UBERON:0000179!8.63e-08!15;UBERON:0000463!8.63e-08!15;UBERON:0003081!7.76e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!3.11e-30!102;UBERON:0003061!3.11e-30!102;UBERON:0002193!5.54e-27!112;UBERON:0002371!1.58e-19!80;UBERON:0001474!3.17e-17!86;UBERON:0002405!5.71e-15!115;UBERON:0004765!9.46e-13!101;UBERON:0001434!9.46e-13!101;UBERON:0002384!4.50e-09!375;UBERON:0000178!8.63e-08!15;UBERON:0000179!8.63e-08!15;UBERON:0000463!8.63e-08!15;UBERON:0003081!7.76e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.30e-08;15!UBERON:0000179;6.30e-08;15!UBERON:0000463;6.30e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.23e-08,15;UBERON:0000179,7.23e-08,15;UBERON:0000463,7.23e-08,15;UBERON:0002384,3.04e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,4.32700704533794,4.60595277716655,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.581592955118259,0,0.727752183563449,0.232429036905685,1.23350366406548,0.309706370895104,0.575384784644301,0.768482119587302,0,0.689491361473237,1.29096936716765,0,1.50593871634084,0.272906150057846,1.57306439111559,0.306083892370903,2.56743221660875,0,0.329851300186716,0.598390972864896,1.27867425159808,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.425208599930087,0,3.03287304095537,0.600707571366025,0.64290234678832,0.570025487482497,0,0.547992461293902,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,3.14735632182133,1.17903228824749,1.02800749499755,0.334372990781356,8.14805666583976,7.101717086021,5.84480185223734,2.00538822393312,9.72199494666963,5.53834736459053,5.41607727530031,0.512365278902701,0.780356085359269,0.657751618414705,0.829050053357545,2.60822777161547,7.41432815810302,5.61835738988397,4.18142095219907,1.0197840842781,5.74830740402882,3.09264700934367,5.31341353240956,1.27426165729639,0.651083453856419,3.8018081777935,0.451725357233318,1.4078527226986,2.49861453104692,0.947109008176067,4.92676798152628,4.23374160771938,3.7441627409691,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,3.52457796419313,3.747118788841,0.88369703398466,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,5.71389204585589,3.01878604803324,2.82354679815446,0,0,0,0,0,4.49404214368309,5.9832291840805,3.31532410748828,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,3.01999881146064,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,2.37216902944498,2.59484271787656,2.08843899010911,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,4.46908502274835,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,5.39937339723601,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0.327130788511688,0,0,0,1.59989916683944,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,4.32700704533794,4.60595277716655,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.581592955118259,0,0.727752183563449,0.232429036905685,1.23350366406548,0.309706370895104,0.575384784644301,0.768482119587302,0,0.689491361473237,1.29096936716765,0,1.50593871634084,0.272906150057846,1.57306439111559,0.306083892370903,2.56743221660875,0,0.329851300186716,0.598390972864896,1.27867425159808,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.425208599930087,0,3.03287304095537,0.600707571366025,0.64290234678832,0.570025487482497,0,0.547992461293902,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,3.14735632182133,1.17903228824749,1.02800749499755,0.334372990781356,8.14805666583976,7.101717086021,5.84480185223734,2.00538822393312,9.72199494666963,5.53834736459053,5.41607727530031,0.512365278902701,0.780356085359269,0.657751618414705,0.829050053357545,2.60822777161547,7.41432815810302,5.61835738988397,4.18142095219907,1.0197840842781,5.74830740402882,3.09264700934367,5.31341353240956,1.27426165729639,0.651083453856419,3.8018081777935,0.451725357233318,1.4078527226986,2.49861453104692,0.947109008176067,4.92676798152628,4.23374160771938,3.7441627409691,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,3.52457796419313,3.747118788841,0.88369703398466,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,5.71389204585589,3.01878604803324,2.82354679815446,0,0,0,0,0,4.49404214368309,5.9832291840805,3.31532410748828,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,3.01999881146064,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,2.37216902944498,2.59484271787656,2.08843899010911,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,4.46908502274835,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,5.39937339723601,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0.327130788511688,0,0,0,1.59989916683944,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@SYTL3 | |short_description=p9@SYTL3 | ||
}} | }} |
Latest revision as of 12:05, 16 September 2015
Short description: | p9@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYTL3_5end |
Coexpression cluster: | C4200_Mast_immature_CD4_Natural_CD8_Basophils_hairy |
Association with transcript: | 11bp_to_ENST00000543689_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | F5H278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 7.23e-08 | 15 |
haemolymphatic fluid | 7.23e-08 | 15 |
organism substance | 7.23e-08 | 15 |
connective tissue | 3.04e-07 | 371 |