FFCP PHASE1:Hg19::chr6:130687612..130687617,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=5bp_to_BC044246_5end | |association_with_transcript=5bp_to_BC044246_5end | ||
|cluster_id=chr6:130687612..130687617,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_13_at_TMEM200A_5end | |description=CAGE_peak_13_at_TMEM200A_5end | ||
|id=chr6:130687612..130687617,+ | |id=chr6:130687612..130687617,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.10e-21!180;CL:0000187!3.55e-14!54;CL:0000680!7.01e-14!57;CL:0000056!7.01e-14!57;CL:0000355!7.01e-14!57;CL:0000359!2.17e-12!32;CL:0000183!3.86e-12!59;CL:0000393!8.90e-12!60;CL:0000211!8.90e-12!60;CL:0000057!1.64e-11!75;CL:0002334!2.07e-11!12;CL:0000192!4.68e-11!42;CL:0000514!4.68e-11!42 | |ontology_enrichment_celltype=CL:0000055!6.10e-21!180;CL:0000187!3.55e-14!54;CL:0000680!7.01e-14!57;CL:0000056!7.01e-14!57;CL:0000355!7.01e-14!57;CL:0000359!2.17e-12!32;CL:0000183!3.86e-12!59;CL:0000393!8.90e-12!60;CL:0000211!8.90e-12!60;CL:0000057!1.64e-11!75;CL:0002334!2.07e-11!12;CL:0000192!4.68e-11!42;CL:0000514!4.68e-11!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.07e-17;32!CL:0002595;1.96e-14;5!CL:0000192;8.92e-11;43!CL:0002568;2.70e-09;1!CL:0002581;6.46e-09;1!CL:0002591;6.46e-09;1!CL:1000306;9.19e-09;4!CL:0002547;9.19e-09;4!CL:0002594;1.63e-08;4!CL:0000062;1.99e-08;9!CL:0000393;1.72e-07;61!CL:0000211;1.72e-07;61!CL:0002537;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.20e-18,32;CL:0002595,2.41e-14,5;CL:0000192,3.93e-13,43;CL:0000514,3.93e-13,43;CL:0000187,2.12e-12,55;CL:0000680,1.12e-11,58;CL:0000056,1.12e-11,58;CL:0000355,1.12e-11,58;CL:0000393,5.05e-11,61;CL:0000211,5.05e-11,61;CL:0002568,2.22e-09,1;CL:0002581,4.91e-09,1;CL:0002591,7.27e-09,1;CL:1000306,7.29e-09,4;CL:0002547,7.29e-09,4;CL:0002594,1.98e-08,4;CL:0000062,5.76e-07,11;CL:0000375,5.76e-07,11;CL:0000335,5.76e-07,11;CL:0002537,8.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;8.92e-11;43!CL:0000335;5.64e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.85e-12!63;UBERON:0001015!1.85e-12!63;UBERON:0000383!1.85e-12!63;UBERON:0001134!2.62e-12!61;UBERON:0002036!2.62e-12!61;UBERON:0003082!2.62e-12!61;UBERON:0004290!2.54e-11!70;UBERON:0001637!2.58e-10!42;UBERON:0003509!2.58e-10!42;UBERON:0004572!2.58e-10!42;UBERON:0000486!3.11e-10!82;UBERON:0000914!5.04e-10!83;UBERON:0002329!5.04e-10!83;UBERON:0003077!5.04e-10!83;UBERON:0003059!5.04e-10!83;UBERON:0007282!5.04e-10!83;UBERON:0009618!5.04e-10!83;UBERON:0007285!5.04e-10!83;UBERON:0004573!3.94e-08!33;UBERON:0004571!3.94e-08!33;UBERON:0004872!5.74e-08!84;UBERON:0000475!7.20e-08!365;UBERON:0001981!1.54e-07!60;UBERON:0007500!1.54e-07!60;UBERON:0004537!1.54e-07!60;UBERON:0006965!1.54e-07!60;UBERON:0000490!2.91e-07!138;UBERON:0002049!8.41e-07!79;UBERON:0007798!8.41e-07!79 | |ontology_enrichment_uberon=UBERON:0002385!1.85e-12!63;UBERON:0001015!1.85e-12!63;UBERON:0000383!1.85e-12!63;UBERON:0001134!2.62e-12!61;UBERON:0002036!2.62e-12!61;UBERON:0003082!2.62e-12!61;UBERON:0004290!2.54e-11!70;UBERON:0001637!2.58e-10!42;UBERON:0003509!2.58e-10!42;UBERON:0004572!2.58e-10!42;UBERON:0000486!3.11e-10!82;UBERON:0000914!5.04e-10!83;UBERON:0002329!5.04e-10!83;UBERON:0003077!5.04e-10!83;UBERON:0003059!5.04e-10!83;UBERON:0007282!5.04e-10!83;UBERON:0009618!5.04e-10!83;UBERON:0007285!5.04e-10!83;UBERON:0004573!3.94e-08!33;UBERON:0004571!3.94e-08!33;UBERON:0004872!5.74e-08!84;UBERON:0000475!7.20e-08!365;UBERON:0001981!1.54e-07!60;UBERON:0007500!1.54e-07!60;UBERON:0004537!1.54e-07!60;UBERON:0006965!1.54e-07!60;UBERON:0000490!2.91e-07!138;UBERON:0002049!8.41e-07!79;UBERON:0007798!8.41e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.96e-14;5!UBERON:0001533;1.96e-14;5!UBERON:0001637;8.96e-13;42!UBERON:0003509;8.96e-13;42!UBERON:0004572;8.96e-13;42!UBERON:0004573;1.96e-12;33!UBERON:0004571;1.96e-12;33!UBERON:0003513;1.83e-10;7!UBERON:0007500;2.02e-09;56!UBERON:0001981;2.02e-09;56!UBERON:0004537;2.02e-09;56!UBERON:0004797;9.19e-09;4!UBERON:0000415;9.19e-09;4!UBERON:0007240;9.19e-09;4!UBERON:0005742;9.19e-09;4!UBERON:0005734;9.19e-09;4!UBERON:0004664;9.19e-09;4!UBERON:0004663;9.19e-09;4!UBERON:0001310;1.63e-08;4!UBERON:0000055;3.90e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.37e-20,42;UBERON:0003509,2.37e-20,42;UBERON:0004572,2.37e-20,42;UBERON:0003834,2.41e-14,5;UBERON:0001533,2.41e-14,5;UBERON:0004573,4.27e-14,33;UBERON:0004571,4.27e-14,33;UBERON:0007500,5.94e-14,59;UBERON:0001981,5.94e-14,59;UBERON:0004537,5.94e-14,59;UBERON:0006965,5.94e-14,59;UBERON:0000055,7.36e-12,68;UBERON:0004872,2.65e-11,83;UBERON:0002329,2.89e-11,71;UBERON:0003059,2.89e-11,71;UBERON:0007282,2.89e-11,71;UBERON:0004290,2.89e-11,71;UBERON:0009618,2.89e-11,71;UBERON:0003077,4.40e-11,72;UBERON:0007285,4.40e-11,72;UBERON:0007524,6.62e-11,73;UBERON:0001134,8.08e-11,62;UBERON:0002036,8.08e-11,62;UBERON:0003082,8.08e-11,62;UBERON:0002385,1.98e-10,64;UBERON:0001015,1.98e-10,64;UBERON:0000383,1.98e-10,64;UBERON:0003513,2.12e-10,7;UBERON:0002049,4.23e-10,78;UBERON:0007798,4.23e-10,78;UBERON:0007503,4.35e-10,78;UBERON:0000486,2.28e-09,83;UBERON:0000415,7.29e-09,4;UBERON:0007240,7.29e-09,4;UBERON:0005742,7.29e-09,4;UBERON:0005734,7.29e-09,4;UBERON:0004664,7.29e-09,4;UBERON:0004663,7.29e-09,4;UBERON:0001310,1.98e-08,4;UBERON:0004535,4.17e-08,109;UBERON:0001009,7.81e-08,112;UBERON:0003914,2.07e-07,117 | |||
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| ||
|short_description=p13@TMEM200A | |short_description=p13@TMEM200A | ||
}} | }} |
Latest revision as of 17:39, 24 September 2015
Short description: | p13@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 5bp_to_BC044246_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.20e-18 | 32 |
smooth muscle cell of the subclavian artery | 2.41e-14 | 5 |
smooth muscle cell | 3.93e-13 | 43 |
smooth muscle myoblast | 3.93e-13 | 43 |
muscle cell | 2.12e-12 | 55 |
muscle precursor cell | 1.12e-11 | 58 |
myoblast | 1.12e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-11 | 58 |
electrically responsive cell | 5.05e-11 | 61 |
electrically active cell | 5.05e-11 | 61 |
mesenchymal stem cell of Wharton's jelly | 2.22e-09 | 1 |
perirenal preadipocyte | 4.91e-09 | 1 |
smooth muscle cell of the pulmonary artery | 7.27e-09 | 1 |
fibroblast of tunica adventitia of artery | 7.29e-09 | 4 |
fibroblast of the aortic adventitia | 7.29e-09 | 4 |
smooth muscle cell of the umbilical artery | 1.98e-08 | 4 |
osteoblast | 5.76e-07 | 11 |
osteoprogenitor cell | 5.76e-07 | 11 |
mesenchyme condensation cell | 5.76e-07 | 11 |
amnion mesenchymal stem cell | 8.34e-07 | 5 |