FFCP PHASE1:Hg19::chr6:112081060..112081083,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |EntrezGene=2534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |HGNC=4037 | ||
|TSSclassifier=strong | |||
|UniProt=E5RH71 | |UniProt=E5RH71 | ||
|association_with_transcript=36bp_to_ENST00000517419_5end | |association_with_transcript=36bp_to_ENST00000517419_5end | ||
|cluster_id=chr6:112081060..112081083,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_FYN_5end | |description=CAGE_peak_7_at_FYN_5end | ||
|id=chr6:112081060..112081083,- | |id=chr6:112081060..112081083,- | ||
|ontology_enrichment_celltype=CL:0000791!2.71e-30!18;CL:0000789!2.71e-30!18;CL:0002420!2.71e-30!18;CL:0002419!2.71e-30!18;CL:0000790!2.71e-30!18;CL:0000738!7.69e-21!140;CL:0000084!2.76e-20!25;CL:0000827!2.76e-20!25;CL:0000625!1.18e-17!11;CL:0002087!7.75e-16!119;CL:0000037!2.32e-14!172;CL:0000566!2.32e-14!172;CL:0000624!3.43e-13!6;CL:0000988!7.79e-13!182;CL:0002031!1.34e-12!124;CL:0000838!4.23e-12!52;CL:0002032!5.41e-12!165;CL:0000837!5.41e-12!165;CL:0000094!7.30e-12!8;CL:0000542!9.35e-12!53;CL:0000051!9.35e-12!53;CL:0000081!2.95e-08!11;CL:0000766!3.47e-08!76;CL:0000898!1.77e-07!3;CL:0000623!1.84e-07!3;CL:0000825!1.84e-07!3;CL:0000842!2.77e-07!3;CL:0000767!4.94e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.71e-30!18;CL:0000789!2.71e-30!18;CL:0002420!2.71e-30!18;CL:0002419!2.71e-30!18;CL:0000790!2.71e-30!18;CL:0000738!7.69e-21!140;CL:0000084!2.76e-20!25;CL:0000827!2.76e-20!25;CL:0000625!1.18e-17!11;CL:0002087!7.75e-16!119;CL:0000037!2.32e-14!172;CL:0000566!2.32e-14!172;CL:0000624!3.43e-13!6;CL:0000988!7.79e-13!182;CL:0002031!1.34e-12!124;CL:0000838!4.23e-12!52;CL:0002032!5.41e-12!165;CL:0000837!5.41e-12!165;CL:0000094!7.30e-12!8;CL:0000542!9.35e-12!53;CL:0000051!9.35e-12!53;CL:0000081!2.95e-08!11;CL:0000766!3.47e-08!76;CL:0000898!1.77e-07!3;CL:0000623!1.84e-07!3;CL:0000825!1.84e-07!3;CL:0000842!2.77e-07!3;CL:0000767!4.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.25e-53;18!CL:0000789;2.25e-53;18!CL:0002419;2.25e-53;18!CL:0000084;1.94e-37;25!CL:0000625;2.33e-31;11!CL:0000624;1.32e-27;6!CL:0000094;7.94e-19;8!CL:0000898;7.73e-15;3!CL:0000623;9.07e-15;3!CL:0000226;2.15e-14;3!CL:0000842;2.15e-14;3!CL:0000767;7.66e-14;3!CL:0000081;1.54e-13;11!CL:0000542;9.55e-12;53!CL:0000815;2.43e-10;2!CL:0000792;2.43e-10;2!CL:0002677;2.43e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.22e-53,18;CL:0000789,2.22e-53,18;CL:0002420,2.22e-53,18;CL:0002419,2.22e-53,18;CL:0000790,2.22e-53,18;CL:0000084,1.92e-37,25;CL:0000827,1.92e-37,25;CL:0000625,2.37e-31,11;CL:0000624,1.26e-27,6;CL:0000838,3.93e-24,52;CL:0000542,1.35e-23,53;CL:0000051,1.35e-23,53;CL:0000738,9.41e-21,136;CL:0000094,7.22e-19,8;CL:0000037,1.51e-15,168;CL:0002087,3.89e-15,115;CL:0000898,8.09e-15,3;CL:0000623,8.87e-15,3;CL:0000825,8.87e-15,3;CL:0000988,2.00e-14,177;CL:0000226,2.20e-14,3;CL:0000842,2.20e-14,3;CL:0000767,8.00e-14,3;CL:0000081,1.44e-13,11;CL:0002032,1.62e-12,161;CL:0000837,1.62e-12,161;CL:0000815,2.55e-10,2;CL:0000792,2.55e-10,2;CL:0002677,2.55e-10,2;CL:0002031,3.33e-10,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.25e-53;18!CL:0000051;9.55e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.53e-09!102;UBERON:0003061!2.53e-09!102;UBERON:0002193!2.65e-09!112;UBERON:0000178!2.09e-07!15;UBERON:0000179!2.09e-07!15;UBERON:0000463!2.09e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.53e-09!102;UBERON:0003061!2.53e-09!102;UBERON:0002193!2.65e-09!112;UBERON:0000178!2.09e-07!15;UBERON:0000179!2.09e-07!15;UBERON:0000463!2.09e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.02e-13;15!UBERON:0000179;3.02e-13;15!UBERON:0000463;3.02e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.23e-13,15;UBERON:0000179,3.23e-13,15;UBERON:0000463,3.23e-13,15 | |||
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| ||
|short_description=p7@FYN | |short_description=p7@FYN | ||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p7@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FYN_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 36bp_to_ENST00000517419_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | E5RH71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.22e-53 | 18 |
alpha-beta T cell | 2.22e-53 | 18 |
immature T cell | 2.22e-53 | 18 |
mature T cell | 2.22e-53 | 18 |
immature alpha-beta T cell | 2.22e-53 | 18 |
T cell | 1.92e-37 | 25 |
pro-T cell | 1.92e-37 | 25 |
CD8-positive, alpha-beta T cell | 2.37e-31 | 11 |
CD4-positive, alpha-beta T cell | 1.26e-27 | 6 |
lymphoid lineage restricted progenitor cell | 3.93e-24 | 52 |
lymphocyte | 1.35e-23 | 53 |
common lymphoid progenitor | 1.35e-23 | 53 |
leukocyte | 9.41e-21 | 136 |
granulocyte | 7.22e-19 | 8 |
hematopoietic stem cell | 1.51e-15 | 168 |
nongranular leukocyte | 3.89e-15 | 115 |
naive T cell | 8.09e-15 | 3 |
natural killer cell | 8.87e-15 | 3 |
pro-NK cell | 8.87e-15 | 3 |
hematopoietic cell | 2.00e-14 | 177 |
single nucleate cell | 2.20e-14 | 3 |
mononuclear cell | 2.20e-14 | 3 |
basophil | 8.00e-14 | 3 |
blood cell | 1.44e-13 | 11 |
hematopoietic oligopotent progenitor cell | 1.62e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-12 | 161 |
regulatory T cell | 2.55e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.55e-10 | 2 |
naive regulatory T cell | 2.55e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 3.33e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.23e-13 | 15 |
haemolymphatic fluid | 3.23e-13 | 15 |
organism substance | 3.23e-13 | 15 |