FFCP PHASE1:Hg19::chr5:73981024..73981042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3074 | |EntrezGene=3074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4879 | |HGNC=4879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000515528_5end | |association_with_transcript=0bp_to_ENST00000515528_5end | ||
|cluster_id=chr5:73981024..73981042,+ | |||
|description=CAGE_peak_3_at_HEXB_5end | |description=CAGE_peak_3_at_HEXB_5end | ||
|id=chr5:73981024..73981042,+ | |id=chr5:73981024..73981042,+ | ||
|ontology_enrichment_celltype=CL:0000557!2.31e-23!71;CL:0002009!2.86e-23!65;CL:0002194!3.69e-23!63;CL:0000576!3.69e-23!63;CL:0000040!3.69e-23!63;CL:0000559!3.69e-23!63;CL:0000766!2.94e-21!76;CL:0000839!1.23e-20!70;CL:0002057!4.15e-15!42;CL:0000860!1.87e-14!45;CL:0000012!8.68e-13!682;CL:0000048!9.77e-13!430;CL:0000548!9.82e-13!679;CL:0000004!9.82e-13!679;CL:0000255!9.82e-13!679;CL:0000144!1.01e-12!625;CL:0002371!1.10e-12!591;CL:0000063!5.10e-12!578;CL:0000723!8.16e-12!436;CL:0000134!1.82e-11!358;CL:0002320!1.95e-11!365;CL:0000034!6.70e-11!444;CL:0000219!1.75e-10!390;CL:0000763!4.45e-09!112;CL:0000049!4.45e-09!112;CL:0000055!3.21e-08!180 | |ontology_enrichment_celltype=CL:0000557!2.31e-23!71;CL:0002009!2.86e-23!65;CL:0002194!3.69e-23!63;CL:0000576!3.69e-23!63;CL:0000040!3.69e-23!63;CL:0000559!3.69e-23!63;CL:0000766!2.94e-21!76;CL:0000839!1.23e-20!70;CL:0002057!4.15e-15!42;CL:0000860!1.87e-14!45;CL:0000012!8.68e-13!682;CL:0000048!9.77e-13!430;CL:0000548!9.82e-13!679;CL:0000004!9.82e-13!679;CL:0000255!9.82e-13!679;CL:0000144!1.01e-12!625;CL:0002371!1.10e-12!591;CL:0000063!5.10e-12!578;CL:0000723!8.16e-12!436;CL:0000134!1.82e-11!358;CL:0002320!1.95e-11!365;CL:0000034!6.70e-11!444;CL:0000219!1.75e-10!390;CL:0000763!4.45e-09!112;CL:0000049!4.45e-09!112;CL:0000055!3.21e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.59e-14;39!CL:0000234;1.59e-14;39!CL:0000860;3.64e-13;33!CL:0002057;3.64e-13;33!CL:0000576;5.07e-12;48!CL:0000766;7.37e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.22e-23,67;CL:0002009,1.27e-23,61;CL:0002194,1.53e-23,59;CL:0000576,1.53e-23,59;CL:0000040,1.53e-23,59;CL:0000559,1.53e-23,59;CL:0000766,2.04e-21,72;CL:0000839,7.79e-21,66;CL:0000473,6.57e-19,48;CL:0000234,6.57e-19,48;CL:0000860,4.15e-15,42;CL:0002057,4.15e-15,42;CL:0000048,8.26e-13,427;CL:0000723,7.05e-12,433;CL:0000134,1.86e-11,354;CL:0002320,2.00e-11,361;CL:0000034,5.86e-11,441;CL:0000219,1.86e-10,386;CL:0000763,6.82e-09,108;CL:0000049,6.82e-09,108;CL:0000057,7.78e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!2.12e-25!101;UBERON:0001434!2.12e-25!101;UBERON:0001474!1.17e-24!86;UBERON:0002371!4.37e-23!80;UBERON:0002204!9.37e-22!167;UBERON:0000926!1.12e-17!448;UBERON:0004120!1.12e-17!448;UBERON:0006603!1.12e-17!448;UBERON:0002405!1.84e-15!115;UBERON:0002390!2.42e-14!102;UBERON:0003061!2.42e-14!102;UBERON:0002193!7.59e-14!112;UBERON:0002384!8.47e-12!375;UBERON:0000062!5.49e-09!511;UBERON:0003081!1.44e-08!216;UBERON:0000480!2.12e-07!626;UBERON:0000467!2.38e-07!625;UBERON:0000468!8.06e-07!659 | |ontology_enrichment_uberon=UBERON:0004765!2.12e-25!101;UBERON:0001434!2.12e-25!101;UBERON:0001474!1.17e-24!86;UBERON:0002371!4.37e-23!80;UBERON:0002204!9.37e-22!167;UBERON:0000926!1.12e-17!448;UBERON:0004120!1.12e-17!448;UBERON:0006603!1.12e-17!448;UBERON:0002405!1.84e-15!115;UBERON:0002390!2.42e-14!102;UBERON:0003061!2.42e-14!102;UBERON:0002193!7.59e-14!112;UBERON:0002384!8.47e-12!375;UBERON:0000062!5.49e-09!511;UBERON:0003081!1.44e-08!216;UBERON:0000480!2.12e-07!626;UBERON:0000467!2.38e-07!625;UBERON:0000468!8.06e-07!659 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.91e-25,100;UBERON:0001474,8.15e-25,82;UBERON:0004765,1.86e-24,90;UBERON:0002371,2.95e-23,76;UBERON:0002204,7.78e-22,167;UBERON:0002405,1.14e-18,93;UBERON:0000926,3.06e-15,315;UBERON:0004120,3.06e-15,315;UBERON:0006603,3.06e-15,315;UBERON:0002390,3.20e-14,98;UBERON:0003061,3.20e-14,98;UBERON:0002193,1.07e-13,108;UBERON:0002384,8.78e-12,371;UBERON:0003081,3.09e-09,203 | |||
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| ||
|short_description=p3@HEXB | |short_description=p3@HEXB | ||
}} | }} |
Latest revision as of 16:45, 18 September 2015
Short description: | p3@HEXB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HEXB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000515528_5end |
EntrezGene: | HEXB |
HGNC: | 4879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.22e-23 | 67 |
macrophage dendritic cell progenitor | 1.27e-23 | 61 |
monopoietic cell | 1.53e-23 | 59 |
monocyte | 1.53e-23 | 59 |
monoblast | 1.53e-23 | 59 |
promonocyte | 1.53e-23 | 59 |
myeloid leukocyte | 2.04e-21 | 72 |
myeloid lineage restricted progenitor cell | 7.79e-21 | 66 |
defensive cell | 6.57e-19 | 48 |
phagocyte | 6.57e-19 | 48 |
classical monocyte | 4.15e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.15e-15 | 42 |
multi fate stem cell | 8.26e-13 | 427 |
somatic stem cell | 7.05e-12 | 433 |
mesenchymal cell | 1.86e-11 | 354 |
connective tissue cell | 2.00e-11 | 361 |
stem cell | 5.86e-11 | 441 |
motile cell | 1.86e-10 | 386 |
myeloid cell | 6.82e-09 | 108 |
common myeloid progenitor | 6.82e-09 | 108 |
fibroblast | 7.78e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.91e-25 | 100 |
bone element | 8.15e-25 | 82 |
skeletal element | 1.86e-24 | 90 |
bone marrow | 2.95e-23 | 76 |
musculoskeletal system | 7.78e-22 | 167 |
immune system | 1.14e-18 | 93 |
mesoderm | 3.06e-15 | 315 |
mesoderm-derived structure | 3.06e-15 | 315 |
presumptive mesoderm | 3.06e-15 | 315 |
hematopoietic system | 3.20e-14 | 98 |
blood island | 3.20e-14 | 98 |
hemolymphoid system | 1.07e-13 | 108 |
connective tissue | 8.78e-12 | 371 |
lateral plate mesoderm | 3.09e-09 | 203 |