FFCP PHASE1:Hg19::chr5:43412512..43412526,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56477 | |EntrezGene=56477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17700 | |HGNC=17700 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRJ3 | |UniProt=Q9NRJ3 | ||
|association_with_transcript=-19bp_to_ENST00000361115_5end | |association_with_transcript=-19bp_to_ENST00000361115_5end | ||
|cluster_id=chr5:43412512..43412526,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_CCL28_5end | |description=CAGE_peak_4_at_CCL28_5end | ||
|id=chr5:43412512..43412526,- | |id=chr5:43412512..43412526,- | ||
|ontology_enrichment_celltype=CL:0002150!8.02e-12!3;CL:0000861!8.02e-12!3;CL:0002149!3.52e-07!6;CL:0002255!3.52e-07!6 | |ontology_enrichment_celltype=CL:0002150!8.02e-12!3;CL:0000861!8.02e-12!3;CL:0002149!3.52e-07!6;CL:0002255!3.52e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.95e-18;6!CL:0002255;1.95e-18;6!CL:1000415;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.95e-18,6;CL:0002255,1.95e-18,6;CL:1000415,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.82e-13;1!UBERON:0008801;2.32e-13;1 | |||
|ontology_enrichment_disease=DOID:305!8.04e-12!106;DOID:0050687!1.69e-09!143;DOID:3001!3.52e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.95e-18;6!DOID:1799;4.23e-13;1!DOID:10165;4.23e-13;1!DOID:1798;4.23e-13;1!DOID:299;7.52e-08;25!DOID:120;2.79e-07;27!DOID:4468;2.91e-07;2!DOID:193;8.66e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.95e-18,6;DOID:1799,4.77e-13,1;DOID:10165,4.77e-13,1;DOID:1798,4.77e-13,1;DOID:299,7.38e-08,25;DOID:4468,2.74e-07,2;DOID:120,2.74e-07,27;DOID:193,8.53e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001557!2.40e-12!19;UBERON:0001737!5.62e-11!9;UBERON:0001829!5.29e-10!2;UBERON:0003127!1.05e-09!2;UBERON:0001004!1.88e-09!72;UBERON:0001007!1.89e-09!155;UBERON:0001555!1.89e-09!155;UBERON:0007026!1.89e-09!155;UBERON:0001041!2.18e-09!98;UBERON:0000341!2.24e-09!2;UBERON:0004921!5.86e-09!129;UBERON:0004185!5.86e-09!129;UBERON:0000065!1.80e-08!53;UBERON:0004119!3.17e-08!169;UBERON:0000925!3.17e-08!169;UBERON:0006595!3.17e-08!169;UBERON:0000078!5.60e-08!18;UBERON:0001044!2.80e-07!6;UBERON:0003293!2.80e-07!6;UBERON:0003294!2.80e-07!6;UBERON:0010047!2.80e-07!6;UBERON:0000167!2.80e-07!6;UBERON:0008947!4.77e-07!38;UBERON:0003258!4.77e-07!38;UBERON:0000077!5.24e-07!130;UBERON:0000072!5.54e-07!46;UBERON:0000166!9.71e-07!21 | |ontology_enrichment_uberon=UBERON:0001557!2.40e-12!19;UBERON:0001737!5.62e-11!9;UBERON:0001829!5.29e-10!2;UBERON:0003127!1.05e-09!2;UBERON:0001004!1.88e-09!72;UBERON:0001007!1.89e-09!155;UBERON:0001555!1.89e-09!155;UBERON:0007026!1.89e-09!155;UBERON:0001041!2.18e-09!98;UBERON:0000341!2.24e-09!2;UBERON:0004921!5.86e-09!129;UBERON:0004185!5.86e-09!129;UBERON:0000065!1.80e-08!53;UBERON:0004119!3.17e-08!169;UBERON:0000925!3.17e-08!169;UBERON:0006595!3.17e-08!169;UBERON:0000078!5.60e-08!18;UBERON:0001044!2.80e-07!6;UBERON:0003293!2.80e-07!6;UBERON:0003294!2.80e-07!6;UBERON:0010047!2.80e-07!6;UBERON:0000167!2.80e-07!6;UBERON:0008947!4.77e-07!38;UBERON:0003258!4.77e-07!38;UBERON:0000077!5.24e-07!130;UBERON:0000072!5.54e-07!46;UBERON:0000166!9.71e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.94e-25;2!UBERON:0003127;3.76e-24;2!UBERON:0001044;1.02e-18;6!UBERON:0003293;1.02e-18;6!UBERON:0003294;1.02e-18;6!UBERON:0010047;1.02e-18;6!UBERON:0003408;1.02e-18;6!UBERON:0000167;1.02e-18;6!UBERON:0001736;1.82e-13;1!UBERON:0001831;2.32e-13;1!UBERON:0001567;2.32e-13;1!UBERON:0001041;2.42e-08;14!UBERON:0003126;1.43e-07;7!UBERON:0001005;1.43e-07;7!UBERON:0004089;2.58e-07;2!UBERON:0006562;2.91e-07;2!UBERON:0000341;4.69e-07;2!UBERON:0000165;4.78e-07;28!UBERON:0000995;7.39e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.95e-25,2;UBERON:0003127,3.34e-24,2;UBERON:0001044,1.02e-18,6;UBERON:0003293,1.02e-18,6;UBERON:0003294,1.02e-18,6;UBERON:0010047,1.02e-18,6;UBERON:0000167,1.02e-18,6;UBERON:0001736,1.82e-13,1;UBERON:0006298,1.82e-13,1;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0003408,1.80e-11,10;UBERON:0000166,6.76e-09,22;UBERON:0003126,1.38e-07,7;UBERON:0001005,1.38e-07,7;UBERON:0004089,2.58e-07,2;UBERON:0000341,4.98e-07,2;UBERON:0000165,8.66e-07,29;UBERON:0000930,8.66e-07,29 | |||
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| ||
|short_description=p4@CCL28 | |short_description=p4@CCL28 | ||
}} | }} |
Latest revision as of 00:36, 18 September 2015
Short description: | p4@CCL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCL28_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -19bp_to_ENST00000361115_5end |
EntrezGene: | CCL28 |
HGNC: | 17700 |
UniProt: | Q9NRJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.95e-18 | 6 |
stromal cell of endometrium | 1.95e-18 | 6 |
epithelial cell of gall bladder | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.95e-25 | 2 |
open tracheal system trachea | 3.34e-24 | 2 |
saliva-secreting gland | 1.02e-18 | 6 |
gland of oral region | 1.02e-18 | 6 |
gland of foregut | 1.02e-18 | 6 |
oral gland | 1.02e-18 | 6 |
oral cavity | 1.02e-18 | 6 |
submandibular gland | 1.82e-13 | 1 |
submandibular gland primordium | 1.82e-13 | 1 |
parotid gland | 2.32e-13 | 1 |
cheek | 2.32e-13 | 1 |
parotid gland primordium | 2.32e-13 | 1 |
gland of gut | 1.80e-11 | 10 |
oral opening | 6.76e-09 | 22 |
trachea | 1.38e-07 | 7 |
respiratory airway | 1.38e-07 | 7 |
midface | 2.58e-07 | 2 |
throat | 4.98e-07 | 2 |
mouth | 8.66e-07 | 29 |
stomodeum | 8.66e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.95e-18 | 6 |
islet cell tumor | 4.77e-13 | 1 |
endocrine pancreas cancer | 4.77e-13 | 1 |
pancreatic endocrine carcinoma | 4.77e-13 | 1 |
adenocarcinoma | 7.38e-08 | 25 |
clear cell adenocarcinoma | 2.74e-07 | 2 |
female reproductive organ cancer | 2.74e-07 | 27 |
reproductive organ cancer | 8.53e-07 | 29 |