FFCP PHASE1:Hg19::chr5:31193847..31193887,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1004 | |EntrezGene=1004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1765 | |HGNC=1765 | ||
|TSSclassifier=strong | |||
|UniProt=P55285,D6RF86 | |UniProt=P55285,D6RF86 | ||
|association_with_transcript=0bp_to_ENST00000265071,ENST00000506396,ENST00000514738_5end | |association_with_transcript=0bp_to_ENST00000265071,ENST00000506396,ENST00000514738_5end | ||
|cluster_id=chr5:31193847..31193887,+ | |||
|coexpression_cluster_id=C1958 | |||
|description=CAGE_peak_1_at_CDH6_5end | |description=CAGE_peak_1_at_CDH6_5end | ||
|id=chr5:31193847..31193887,+ | |id=chr5:31193847..31193887,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.22e-16!32;CL:0000192!1.46e-12!42;CL:0000514!1.46e-12!42;CL:0000055!2.15e-12!180;CL:0000393!1.87e-11!60;CL:0000211!1.87e-11!60;CL:0000183!2.34e-11!59;CL:0000187!2.30e-10!54;CL:0000680!3.33e-10!57;CL:0000056!3.33e-10!57;CL:0000355!3.33e-10!57;CL:0002539!6.06e-07!10 | |ontology_enrichment_celltype=CL:0000359!1.22e-16!32;CL:0000192!1.46e-12!42;CL:0000514!1.46e-12!42;CL:0000055!2.15e-12!180;CL:0000393!1.87e-11!60;CL:0000211!1.87e-11!60;CL:0000183!2.34e-11!59;CL:0000187!2.30e-10!54;CL:0000680!3.33e-10!57;CL:0000056!3.33e-10!57;CL:0000355!3.33e-10!57;CL:0002539!6.06e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-16;32!CL:0000192;6.10e-09;43!CL:0002539;1.20e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.65e-17,32;CL:0000192,1.42e-11,43;CL:0000514,1.42e-11,43;CL:0000393,3.22e-09,61;CL:0000211,3.22e-09,61;CL:0000187,4.72e-08,55;CL:0002539,1.19e-07,10;CL:0000680,1.80e-07,58;CL:0000056,1.80e-07,58;CL:0000355,1.80e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.10e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.89e-24!365;UBERON:0000025!6.68e-24!194;UBERON:0000481!7.42e-23!347;UBERON:0005743!1.12e-22!86;UBERON:0000073!3.48e-22!94;UBERON:0001016!3.48e-22!94;UBERON:0000477!3.94e-22!286;UBERON:0001017!9.95e-22!82;UBERON:0004111!4.73e-20!241;UBERON:0000119!2.10e-19!312;UBERON:0000483!5.51e-19!309;UBERON:0003075!8.96e-19!86;UBERON:0007284!8.96e-19!86;UBERON:0002616!1.38e-18!59;UBERON:0001049!8.38e-18!57;UBERON:0005068!8.38e-18!57;UBERON:0006241!8.38e-18!57;UBERON:0007135!8.38e-18!57;UBERON:0000955!9.14e-18!69;UBERON:0006238!9.14e-18!69;UBERON:0002346!2.21e-17!90;UBERON:0000033!2.01e-16!123;UBERON:0000153!8.20e-16!129;UBERON:0007811!8.20e-16!129;UBERON:0003056!1.19e-13!61;UBERON:0004121!3.07e-13!169;UBERON:0000468!5.24e-13!659;UBERON:0003080!7.53e-13!42;UBERON:0001637!1.18e-12!42;UBERON:0003509!1.18e-12!42;UBERON:0004572!1.18e-12!42;UBERON:0002780!1.20e-12!41;UBERON:0001890!1.20e-12!41;UBERON:0006240!1.20e-12!41;UBERON:0000924!1.41e-12!173;UBERON:0006601!1.41e-12!173;UBERON:0004573!2.18e-12!33;UBERON:0004571!2.18e-12!33;UBERON:0007023!1.11e-11!115;UBERON:0000922!1.34e-11!612;UBERON:0002385!4.01e-11!63;UBERON:0001015!4.01e-11!63;UBERON:0000383!4.01e-11!63;UBERON:0001134!7.76e-11!61;UBERON:0002036!7.76e-11!61;UBERON:0003082!7.76e-11!61;UBERON:0002020!1.17e-10!34;UBERON:0003528!1.17e-10!34;UBERON:0001893!1.98e-10!34;UBERON:0005256!2.66e-10!143;UBERON:0001869!3.58e-10!32;UBERON:0002791!4.15e-10!33;UBERON:0003914!5.62e-10!118;UBERON:0000914!6.00e-10!83;UBERON:0002329!6.00e-10!83;UBERON:0003077!6.00e-10!83;UBERON:0003059!6.00e-10!83;UBERON:0007282!6.00e-10!83;UBERON:0009618!6.00e-10!83;UBERON:0007285!6.00e-10!83;UBERON:0002100!8.09e-10!216;UBERON:0002050!1.66e-09!605;UBERON:0005423!1.66e-09!605;UBERON:0000467!2.19e-09!625;UBERON:0000923!2.57e-09!604;UBERON:0005291!2.57e-09!604;UBERON:0006598!2.57e-09!604;UBERON:0002532!2.57e-09!604;UBERON:0004872!3.18e-09!84;UBERON:0000480!3.23e-09!626;UBERON:0004290!6.76e-09!70;UBERON:0003103!3.03e-08!69;UBERON:0000956!7.49e-08!25;UBERON:0000203!7.49e-08!25;UBERON:0001981!1.75e-07!60;UBERON:0007500!1.75e-07!60;UBERON:0004537!1.75e-07!60;UBERON:0006965!1.75e-07!60;UBERON:0002049!2.95e-07!79;UBERON:0007798!2.95e-07!79;UBERON:0000062!4.26e-07!511;UBERON:0004237!6.06e-07!10;UBERON:0004695!6.06e-07!10;UBERON:0002111!6.06e-07!10;UBERON:0004178!6.06e-07!10;UBERON:0000064!8.64e-07!219;UBERON:0007625!9.19e-07!11;UBERON:0002619!9.71e-07!22 | |ontology_enrichment_uberon=UBERON:0000475!5.89e-24!365;UBERON:0000025!6.68e-24!194;UBERON:0000481!7.42e-23!347;UBERON:0005743!1.12e-22!86;UBERON:0000073!3.48e-22!94;UBERON:0001016!3.48e-22!94;UBERON:0000477!3.94e-22!286;UBERON:0001017!9.95e-22!82;UBERON:0004111!4.73e-20!241;UBERON:0000119!2.10e-19!312;UBERON:0000483!5.51e-19!309;UBERON:0003075!8.96e-19!86;UBERON:0007284!8.96e-19!86;UBERON:0002616!1.38e-18!59;UBERON:0001049!8.38e-18!57;UBERON:0005068!8.38e-18!57;UBERON:0006241!8.38e-18!57;UBERON:0007135!8.38e-18!57;UBERON:0000955!9.14e-18!69;UBERON:0006238!9.14e-18!69;UBERON:0002346!2.21e-17!90;UBERON:0000033!2.01e-16!123;UBERON:0000153!8.20e-16!129;UBERON:0007811!8.20e-16!129;UBERON:0003056!1.19e-13!61;UBERON:0004121!3.07e-13!169;UBERON:0000468!5.24e-13!659;UBERON:0003080!7.53e-13!42;UBERON:0001637!1.18e-12!42;UBERON:0003509!1.18e-12!42;UBERON:0004572!1.18e-12!42;UBERON:0002780!1.20e-12!41;UBERON:0001890!1.20e-12!41;UBERON:0006240!1.20e-12!41;UBERON:0000924!1.41e-12!173;UBERON:0006601!1.41e-12!173;UBERON:0004573!2.18e-12!33;UBERON:0004571!2.18e-12!33;UBERON:0007023!1.11e-11!115;UBERON:0000922!1.34e-11!612;UBERON:0002385!4.01e-11!63;UBERON:0001015!4.01e-11!63;UBERON:0000383!4.01e-11!63;UBERON:0001134!7.76e-11!61;UBERON:0002036!7.76e-11!61;UBERON:0003082!7.76e-11!61;UBERON:0002020!1.17e-10!34;UBERON:0003528!1.17e-10!34;UBERON:0001893!1.98e-10!34;UBERON:0005256!2.66e-10!143;UBERON:0001869!3.58e-10!32;UBERON:0002791!4.15e-10!33;UBERON:0003914!5.62e-10!118;UBERON:0000914!6.00e-10!83;UBERON:0002329!6.00e-10!83;UBERON:0003077!6.00e-10!83;UBERON:0003059!6.00e-10!83;UBERON:0007282!6.00e-10!83;UBERON:0009618!6.00e-10!83;UBERON:0007285!6.00e-10!83;UBERON:0002100!8.09e-10!216;UBERON:0002050!1.66e-09!605;UBERON:0005423!1.66e-09!605;UBERON:0000467!2.19e-09!625;UBERON:0000923!2.57e-09!604;UBERON:0005291!2.57e-09!604;UBERON:0006598!2.57e-09!604;UBERON:0002532!2.57e-09!604;UBERON:0004872!3.18e-09!84;UBERON:0000480!3.23e-09!626;UBERON:0004290!6.76e-09!70;UBERON:0003103!3.03e-08!69;UBERON:0000956!7.49e-08!25;UBERON:0000203!7.49e-08!25;UBERON:0001981!1.75e-07!60;UBERON:0007500!1.75e-07!60;UBERON:0004537!1.75e-07!60;UBERON:0006965!1.75e-07!60;UBERON:0002049!2.95e-07!79;UBERON:0007798!2.95e-07!79;UBERON:0000062!4.26e-07!511;UBERON:0004237!6.06e-07!10;UBERON:0004695!6.06e-07!10;UBERON:0002111!6.06e-07!10;UBERON:0004178!6.06e-07!10;UBERON:0000064!8.64e-07!219;UBERON:0007625!9.19e-07!11;UBERON:0002619!9.71e-07!22 | ||
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| ||
|short_description=p1@CDH6 | |short_description=p1@CDH6 | ||
}} | }} |
Latest revision as of 14:41, 17 September 2015
Short description: | p1@CDH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH6_5end |
Coexpression cluster: | C1958_mesodermal_Lens_Smooth_Ciliary_Fibroblast_teratocarcinoma_leiomyoma |
Association with transcript: | 0bp_to_ENST00000265071, ENST00000506396, ENST00000514738_5end |
EntrezGene: | CDH6 |
HGNC: | 1765 |
UniProt: | P55285D6RF86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.65e-17 | 32 |
smooth muscle cell | 1.42e-11 | 43 |
smooth muscle myoblast | 1.42e-11 | 43 |
electrically responsive cell | 3.22e-09 | 61 |
electrically active cell | 3.22e-09 | 61 |
muscle cell | 4.72e-08 | 55 |
aortic smooth muscle cell | 1.19e-07 | 10 |
muscle precursor cell | 1.80e-07 | 58 |
myoblast | 1.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-07 | 58 |