FFCP PHASE1:Hg19::chr15:51791327..51791332,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:51791327..51791332,-
|short_description=p13@DMXL2
|description=CAGE_peak_13_at_DMXL2_5end
|association_with_transcript=139bp_to_AK123284_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23312 | |EntrezGene=23312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2938 | |HGNC=2938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=139bp_to_AK123284_5end | |||
|cluster_id=chr15:51791327..51791332,- | |||
|description=CAGE_peak_13_at_DMXL2_5end | |||
|id=chr15:51791327..51791332,- | |||
|ontology_enrichment_celltype=CL:0000860!4.34e-28!45;CL:0002057!6.38e-28!42;CL:0002194!1.24e-27!63;CL:0000576!1.24e-27!63;CL:0000040!1.24e-27!63;CL:0000559!1.24e-27!63;CL:0002009!2.61e-26!65;CL:0000839!2.42e-23!70;CL:0000557!8.40e-23!71;CL:0000766!9.35e-22!76;CL:0000763!8.64e-21!112;CL:0000049!8.64e-21!112;CL:0002087!2.97e-14!119;CL:0002032!8.83e-13!165;CL:0000837!8.83e-13!165;CL:0000037!9.32e-13!172;CL:0000566!9.32e-13!172;CL:0000988!3.39e-12!182;CL:0002031!1.24e-11!124;CL:0000738!1.39e-10!140 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.53e-25;39!CL:0000234;3.53e-25;39!CL:0000860;3.14e-22;33!CL:0002057;3.14e-22;33!CL:0000235;4.07e-12;6!CL:0000763;1.76e-10;100!CL:0000766;1.10e-09;69!CL:0000576;1.41e-09;48!CL:0000775;6.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.91e-27,48;CL:0000234,2.91e-27,48;CL:0000766,5.87e-22,72;CL:0002194,1.06e-21,59;CL:0000576,1.06e-21,59;CL:0000040,1.06e-21,59;CL:0000559,1.06e-21,59;CL:0002009,5.57e-21,61;CL:0000839,2.27e-19,66;CL:0000557,4.47e-19,67;CL:0000860,6.05e-19,42;CL:0002057,6.05e-19,42;CL:0000763,1.84e-14,108;CL:0000049,1.84e-14,108;CL:0000738,8.59e-14,136;CL:0002087,1.74e-13,115;CL:0002031,6.79e-13,120;CL:0000235,4.07e-12,6;CL:0002032,1.59e-11,161;CL:0000837,1.59e-11,161;CL:0000037,5.20e-11,168;CL:0000988,2.09e-10,177;CL:0000775,6.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.44e-09;2!DOID:4236;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.86e-09,2;DOID:4236,1.86e-09,2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.98e-17,76;UBERON:0001474,1.63e-15,82;UBERON:0004765,4.32e-14,90;UBERON:0002405,1.28e-13,93;UBERON:0002390,6.76e-13,98;UBERON:0003061,6.76e-13,98;UBERON:0001434,1.26e-12,100;UBERON:0002193,1.20e-11,108;UBERON:0002204,2.79e-07,167 | |||
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| ||
|short_description=p13@DMXL2 | |||
}} | }} |
Latest revision as of 00:45, 18 September 2015
Short description: | p13@DMXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DMXL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_AK123284_5end |
EntrezGene: | DMXL2 |
HGNC: | 2938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.91e-27 | 48 |
phagocyte | 2.91e-27 | 48 |
myeloid leukocyte | 5.87e-22 | 72 |
monopoietic cell | 1.06e-21 | 59 |
monocyte | 1.06e-21 | 59 |
monoblast | 1.06e-21 | 59 |
promonocyte | 1.06e-21 | 59 |
macrophage dendritic cell progenitor | 5.57e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.27e-19 | 66 |
granulocyte monocyte progenitor cell | 4.47e-19 | 67 |
classical monocyte | 6.05e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-19 | 42 |
myeloid cell | 1.84e-14 | 108 |
common myeloid progenitor | 1.84e-14 | 108 |
leukocyte | 8.59e-14 | 136 |
nongranular leukocyte | 1.74e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.79e-13 | 120 |
macrophage | 4.07e-12 | 6 |
hematopoietic oligopotent progenitor cell | 1.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-11 | 161 |
hematopoietic stem cell | 5.20e-11 | 168 |
hematopoietic cell | 2.09e-10 | 177 |
neutrophil | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.98e-17 | 76 |
bone element | 1.63e-15 | 82 |
skeletal element | 4.32e-14 | 90 |
immune system | 1.28e-13 | 93 |
hematopoietic system | 6.76e-13 | 98 |
blood island | 6.76e-13 | 98 |
skeletal system | 1.26e-12 | 100 |
hemolymphoid system | 1.20e-11 | 108 |
musculoskeletal system | 2.79e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.86e-09 | 2 |
carcinosarcoma | 1.86e-09 | 2 |