FFCP PHASE1:Hg19::chr5:174252850..174252859,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:174252850..174252859,+ | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_at_chr5:174252850..174252859,+ | |description=CAGE_peak_at_chr5:174252850..174252859,+ | ||
|id=chr5:174252850..174252859,+ | |id=chr5:174252850..174252859,+ | ||
|ontology_enrichment_celltype=CL:0000594!3.33e-21!3;CL:0000188!1.84e-12!9;CL:0002551!9.72e-11!6;CL:0000346!1.06e-10!3;CL:1000428!1.06e-10!3;CL:1001319!1.41e-08!1;CL:1000600!1.41e-08!1;CL:0002559!3.10e-08!4;CL:0002620!3.10e-07!23 | |ontology_enrichment_celltype=CL:0000594!3.33e-21!3;CL:0000188!1.84e-12!9;CL:0002551!9.72e-11!6;CL:0000346!1.06e-10!3;CL:1000428!1.06e-10!3;CL:1001319!1.41e-08!1;CL:1000600!1.41e-08!1;CL:0002559!3.10e-08!4;CL:0002620!3.10e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000346;6.53e-66;3!CL:1000428;6.53e-66;3!CL:0002559;4.05e-40;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.53e-66,3;CL:1000428,6.53e-66,3;CL:0002559,4.05e-40,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!2.17e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002067!3.09e-19!9;UBERON:0004016!3.09e-19!9;UBERON:0010083!3.09e-19!9;UBERON:0000412!1.06e-10!3;UBERON:0001992!1.06e-10!3;UBERON:0004290!4.48e-10!70;UBERON:0000486!4.89e-10!82;UBERON:0002097!5.42e-10!40;UBERON:0002199!9.31e-09!45;UBERON:0002416!9.31e-09!45;UBERON:0007195!1.05e-08!1;UBERON:0004645!1.41e-08!1;UBERON:0001256!1.41e-08!1;UBERON:0001259!1.41e-08!1;UBERON:0002073!3.10e-08!4;UBERON:0005086!3.10e-08!4;UBERON:0000914!3.39e-08!83;UBERON:0002329!3.39e-08!83;UBERON:0003077!3.39e-08!83;UBERON:0003059!3.39e-08!83;UBERON:0007282!3.39e-08!83;UBERON:0009618!3.39e-08!83;UBERON:0007285!3.39e-08!83;UBERON:0001282!6.24e-08!1;UBERON:0009842!6.24e-08!1;UBERON:0003704!6.24e-08!1;UBERON:0001171!6.24e-08!1;UBERON:0001172!6.24e-08!1;UBERON:0002394!1.63e-07!4;UBERON:0003928!1.63e-07!4;UBERON:0005256!8.31e-07!143 | |ontology_enrichment_uberon=UBERON:0002067!3.09e-19!9;UBERON:0004016!3.09e-19!9;UBERON:0010083!3.09e-19!9;UBERON:0000412!1.06e-10!3;UBERON:0001992!1.06e-10!3;UBERON:0004290!4.48e-10!70;UBERON:0000486!4.89e-10!82;UBERON:0002097!5.42e-10!40;UBERON:0002199!9.31e-09!45;UBERON:0002416!9.31e-09!45;UBERON:0007195!1.05e-08!1;UBERON:0004645!1.41e-08!1;UBERON:0001256!1.41e-08!1;UBERON:0001259!1.41e-08!1;UBERON:0002073!3.10e-08!4;UBERON:0005086!3.10e-08!4;UBERON:0000914!3.39e-08!83;UBERON:0002329!3.39e-08!83;UBERON:0003077!3.39e-08!83;UBERON:0003059!3.39e-08!83;UBERON:0007282!3.39e-08!83;UBERON:0009618!3.39e-08!83;UBERON:0007285!3.39e-08!83;UBERON:0001282!6.24e-08!1;UBERON:0009842!6.24e-08!1;UBERON:0003704!6.24e-08!1;UBERON:0001171!6.24e-08!1;UBERON:0001172!6.24e-08!1;UBERON:0002394!1.63e-07!4;UBERON:0003928!1.63e-07!4;UBERON:0005256!8.31e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;6.53e-66;3!UBERON:0001992;6.53e-66;3!UBERON:0007195;2.42e-50;1!UBERON:0002073;4.05e-40;5!UBERON:0002067;7.17e-23;9!UBERON:0001003;3.36e-14;15!UBERON:0007376;3.36e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,6.53e-66,3;UBERON:0001992,6.53e-66,3;UBERON:0007195,2.42e-50,1;UBERON:0002073,4.05e-40,5;UBERON:0005086,4.05e-40,5;UBERON:0002067,7.17e-23,9;UBERON:0004016,7.17e-23,9;UBERON:0010083,7.17e-23,9;UBERON:0001003,3.36e-14,15;UBERON:0007376,3.36e-14,15;UBERON:0007383,3.36e-14,15;UBERON:0005085,2.05e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.591420599958536,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9261750840605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.591420599958536,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9261750840605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:174252850..174252859,+ | |short_description=p@chr5:174252850..174252859,+ | ||
}} | }} |
Latest revision as of 13:22, 30 July 2015
Short description: | p@chr5:174252850..174252859, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:174252850..174252859, + |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.53e-66 | 3 |
stem cell of epidermis | 6.53e-66 | 3 |
hair follicle cell | 4.05e-40 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 6.53e-66 | 3 |
papillary layer of dermis | 6.53e-66 | 3 |
stroma of bone marrow | 2.42e-50 | 1 |
hair follicle | 4.05e-40 | 5 |
hair follicle placode | 4.05e-40 | 5 |
dermis | 7.17e-23 | 9 |
dermatome | 7.17e-23 | 9 |
future dermis | 7.17e-23 | 9 |
skin epidermis | 3.36e-14 | 15 |
outer epithelium | 3.36e-14 | 15 |
enveloping layer of ectoderm | 3.36e-14 | 15 |
ectodermal placode | 2.05e-07 | 31 |