FFCP PHASE1:Hg19::chr5:158525977..158526008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:158525977..158526008,- | |||
|coexpression_cluster_id=C1275 | |||
|description=CAGE_peak_at_chr5:158525977..158526008,- | |description=CAGE_peak_at_chr5:158525977..158526008,- | ||
|id=chr5:158525977..158526008,- | |id=chr5:158525977..158526008,- | ||
|ontology_enrichment_celltype=CL:0000945!1.57e-15!24;CL:0000826!1.57e-15!24;CL:0000236!2.00e-09!14;CL:0000057!4.01e-08!75;CL:0002620!1.38e-07!23 | |ontology_enrichment_celltype=CL:0000945!1.57e-15!24;CL:0000826!1.57e-15!24;CL:0000236!2.00e-09!14;CL:0000057!4.01e-08!75;CL:0002620!1.38e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.57e-35;13!CL:0000945;1.34e-22;24!CL:0000135;1.74e-08;3!CL:0000388;1.74e-08;3!CL:0000542;4.03e-08;53!CL:0000817;2.36e-07;1!CL:0000785;5.60e-07;1!CL:0000819;5.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.88e-32,14;CL:0000945,1.69e-22,24;CL:0000826,1.69e-22,24;CL:0000838,2.03e-09,52;CL:0000542,3.30e-09,53;CL:0000051,3.30e-09,53;CL:0000135,1.02e-08,3;CL:0000388,1.02e-08,3;CL:0000817,1.10e-08,3;CL:0000819,5.78e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.03e-08;53!UBERON:0010227;5.60e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.60e-07;1!DOID:8675;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.78e-07,1;DOID:8675,5.78e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.71e-12;2!UBERON:0007846;1.74e-08;3!UBERON:0000043;1.74e-08;3!UBERON:0007845;1.74e-08;3!UBERON:0007029;1.45e-07;1!UBERON:0002079;5.60e-07;1!UBERON:0002146;5.60e-07;1!UBERON:0005623;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.42e-12,2;UBERON:0007846,1.02e-08,3;UBERON:0000043,1.02e-08,3;UBERON:0007845,1.02e-08,3;UBERON:0007029,1.46e-07,1;UBERON:0002079,3.82e-07,1;UBERON:0002146,4.31e-07,1;UBERON:0005623,4.31e-07,1 | |||
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| ||
|short_description=p@chr5:158525977..158526008,- | |short_description=p@chr5:158525977..158526008,- | ||
}} | }} |
Latest revision as of 12:22, 30 July 2015
Short description: | p@chr5:158525977..158526008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:158525977..158526008, - |
Coexpression cluster: | C1275_CD19_non_lymphoma_acute_skin_trachea_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.88e-32 | 14 |
lymphocyte of B lineage | 1.69e-22 | 24 |
pro-B cell | 1.69e-22 | 24 |
lymphoid lineage restricted progenitor cell | 2.03e-09 | 52 |
lymphocyte | 3.30e-09 | 53 |
common lymphoid progenitor | 3.30e-09 | 53 |
fibrocyte | 1.02e-08 | 3 |
tendon cell | 1.02e-08 | 3 |
precursor B cell | 1.10e-08 | 3 |
B-1 B cell | 5.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
throat | 3.42e-12 | 2 |
dense regular connective tissue | 1.02e-08 | 3 |
tendon | 1.02e-08 | 3 |
regular connective tissue | 1.02e-08 | 3 |
surface | 1.46e-07 | 1 |
left cardiac atrium | 3.82e-07 | 1 |
pulmonary valve | 4.31e-07 | 1 |
semi-lunar valve | 4.31e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.78e-07 | 1 |
lymphosarcoma | 5.78e-07 | 1 |