FFCP PHASE1:Hg19::chr5:134907052..134907077,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134907052..134907077,- | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134907052..134907077,- | |description=CAGE_peak_at_chr5:134907052..134907077,- | ||
|id=chr5:134907052..134907077,- | |id=chr5:134907052..134907077,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000317;3.29e-21;2!CL:1000448;3.29e-21;2!CL:0002308;3.29e-21;2!CL:0002140;3.29e-21;2!CL:0000362;9.16e-11;9!CL:0000622;4.77e-09;5!CL:0000154;1.11e-07;6!CL:0002159;4.29e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,3.84e-21,2;CL:1000448,3.84e-21,2;CL:0002308,3.84e-21,2;CL:0002140,3.84e-21,2;CL:0000362,9.64e-11,9;CL:0000622,5.07e-09,5;CL:0000154,1.17e-07,6;CL:0002159,4.43e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.45e-11;1!UBERON:0008801;3.45e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.45e-11;1!DOID:3151;3.45e-11;1!DOID:1357;3.45e-11;1!DOID:3149;3.45e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.28e-11,1;DOID:1357,3.28e-11,1;DOID:3151,6.00e-11,1;DOID:3149,6.00e-11,1 | |||
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|short_description=p@chr5:134907052..134907077,- | |short_description=p@chr5:134907052..134907077,- | ||
}} | }} |
Latest revision as of 09:59, 30 July 2015
Short description: | p@chr5:134907052..134907077, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134907052..134907077, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 3.84e-21 | 2 |
epithelial cell of sweat gland | 3.84e-21 | 2 |
epithelial cell of skin gland | 3.84e-21 | 2 |
acinar cell of sebaceous gland | 3.84e-21 | 2 |
epidermal cell | 9.64e-11 | 9 |
acinar cell | 5.07e-09 | 5 |
protein secreting cell | 1.17e-07 | 6 |
general ecto-epithelial cell | 4.43e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.84e-21 | 2 |
epidermis gland | 3.84e-21 | 2 |
gland of integumental system | 3.84e-21 | 2 |
sebaceous gland | 3.84e-21 | 2 |
skin sebaceous gland | 3.84e-21 | 2 |
sweat gland | 3.84e-21 | 2 |
sweat gland placode | 3.84e-21 | 2 |
sebaceous gland placode | 3.84e-21 | 2 |
major salivary gland | 5.76e-21 | 2 |
surface | 1.45e-11 | 1 |
submandibular gland | 2.18e-11 | 1 |
submandibular gland primordium | 2.18e-11 | 1 |
parotid gland | 2.42e-11 | 1 |
cheek | 2.42e-11 | 1 |
parotid gland primordium | 2.42e-11 | 1 |
maxillary sinus | 3.28e-11 | 1 |
paranasal sinus | 3.28e-11 | 1 |
skin epidermis | 4.45e-11 | 15 |
outer epithelium | 4.45e-11 | 15 |
enveloping layer of ectoderm | 4.45e-11 | 15 |
zone of skin | 7.35e-11 | 4 |
small intestine | 8.17e-09 | 4 |
saliva-secreting gland | 1.34e-07 | 6 |
gland of oral region | 1.34e-07 | 6 |
gland of foregut | 1.34e-07 | 6 |
oral gland | 1.34e-07 | 6 |
oral cavity | 1.34e-07 | 6 |
oral opening | 1.87e-07 | 22 |
surface structure | 5.69e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.28e-11 | 1 |
maxillary sinus cancer | 3.28e-11 | 1 |
skin squamous cell carcinoma | 6.00e-11 | 1 |
keratoacanthoma | 6.00e-11 | 1 |