FFCP PHASE1:Hg19::chr15:45010228..45010300,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:45010228..45010300,+
|short_description=p@chr15:45010228..45010300,+
|description=CAGE_peak_at_chr15:45010228..45010300,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:45010228..45010300,+ | |||
|coexpression_cluster_id=C2334 | |||
|description=CAGE_peak_at_chr15:45010228..45010300,+ | |||
|id=chr15:45010228..45010300,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.47e-29!140;CL:0002087!5.90e-26!119;CL:0002009!3.13e-23!65;CL:0002031!3.37e-23!124;CL:0000766!6.06e-23!76;CL:0002194!1.31e-22!63;CL:0000576!1.31e-22!63;CL:0000040!1.31e-22!63;CL:0000559!1.31e-22!63;CL:0000557!5.29e-21!71;CL:0000037!5.45e-21!172;CL:0000566!5.45e-21!172;CL:0002032!6.81e-21!165;CL:0000837!6.81e-21!165;CL:0002057!2.37e-20!42;CL:0000988!6.65e-20!182;CL:0000839!1.94e-19!70;CL:0000860!7.59e-19!45;CL:0000763!9.40e-16!112;CL:0000049!9.40e-16!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-19;33!CL:0002057;1.18e-19;33!CL:0000473;4.51e-19;39!CL:0000234;4.51e-19;39!CL:0000576;6.79e-15;48!CL:0000766;8.50e-12;69!CL:0002087;1.63e-08;104!CL:0000738;2.56e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.28e-32,136;CL:0002087,9.91e-29,115;CL:0002009,2.00e-27,61;CL:0000766,2.40e-27,72;CL:0000473,7.74e-27,48;CL:0000234,7.74e-27,48;CL:0002194,1.04e-26,59;CL:0000576,1.04e-26,59;CL:0000040,1.04e-26,59;CL:0000559,1.04e-26,59;CL:0002031,3.41e-26,120;CL:0000557,4.49e-25,67;CL:0000839,1.51e-23,66;CL:0000860,2.33e-23,42;CL:0002057,2.33e-23,42;CL:0000037,4.96e-22,168;CL:0002032,7.64e-22,161;CL:0000837,7.64e-22,161;CL:0000988,3.02e-21,177;CL:0000763,5.68e-17,108;CL:0000049,5.68e-17,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.86e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.25e-27!112;UBERON:0002390!5.68e-26!102;UBERON:0003061!5.68e-26!102;UBERON:0002371!6.54e-19!80;UBERON:0002405!4.71e-18!115;UBERON:0001474!1.25e-16!86;UBERON:0004765!1.14e-12!101;UBERON:0001434!1.14e-12!101;UBERON:0000178!2.73e-07!15;UBERON:0000179!2.73e-07!15;UBERON:0000463!2.73e-07!15;UBERON:0003081!6.98e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.30e-08;15!UBERON:0000179;6.30e-08;15!UBERON:0000463;6.30e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.05e-30,108;UBERON:0002390,7.57e-30,98;UBERON:0003061,7.57e-30,98;UBERON:0002405,1.14e-23,93;UBERON:0002371,1.20e-21,76;UBERON:0001474,2.47e-19,82;UBERON:0004765,1.67e-15,90;UBERON:0001434,7.31e-14,100;UBERON:0003081,4.62e-10,203;UBERON:0000178,3.30e-08,15;UBERON:0000179,3.30e-08,15;UBERON:0000463,3.30e-08,15 | |||
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| ||
|short_description=p@chr15:45010228..45010300,+ | |||
}} | }} |
Latest revision as of 01:56, 25 July 2015
Short description: | p@chr15:45010228..45010300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45010228..45010300, + |
Coexpression cluster: | C2334_Neutrophils_Monocytederived_Whole_myeloma_CD14_blood_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.28e-32 | 136 |
nongranular leukocyte | 9.91e-29 | 115 |
macrophage dendritic cell progenitor | 2.00e-27 | 61 |
myeloid leukocyte | 2.40e-27 | 72 |
defensive cell | 7.74e-27 | 48 |
phagocyte | 7.74e-27 | 48 |
monopoietic cell | 1.04e-26 | 59 |
monocyte | 1.04e-26 | 59 |
monoblast | 1.04e-26 | 59 |
promonocyte | 1.04e-26 | 59 |
hematopoietic lineage restricted progenitor cell | 3.41e-26 | 120 |
granulocyte monocyte progenitor cell | 4.49e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.51e-23 | 66 |
classical monocyte | 2.33e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-23 | 42 |
hematopoietic stem cell | 4.96e-22 | 168 |
hematopoietic oligopotent progenitor cell | 7.64e-22 | 161 |
hematopoietic multipotent progenitor cell | 7.64e-22 | 161 |
hematopoietic cell | 3.02e-21 | 177 |
myeloid cell | 5.68e-17 | 108 |
common myeloid progenitor | 5.68e-17 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.05e-30 | 108 |
hematopoietic system | 7.57e-30 | 98 |
blood island | 7.57e-30 | 98 |
immune system | 1.14e-23 | 93 |
bone marrow | 1.20e-21 | 76 |
bone element | 2.47e-19 | 82 |
skeletal element | 1.67e-15 | 90 |
skeletal system | 7.31e-14 | 100 |
lateral plate mesoderm | 4.62e-10 | 203 |
blood | 3.30e-08 | 15 |
haemolymphatic fluid | 3.30e-08 | 15 |
organism substance | 3.30e-08 | 15 |