FFCP PHASE1:Hg19::chr5:112136808..112136818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:112136808..112136818,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr5:112136808..112136818,+ | |description=CAGE_peak_at_chr5:112136808..112136818,+ | ||
|id=chr5:112136808..112136818,+ | |id=chr5:112136808..112136818,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.08e-17!3;CL:0000319!1.10e-13!1;CL:0000149!1.62e-13!4;CL:0000159!1.75e-07!2 | |ontology_enrichment_celltype=CL:0002586!1.08e-17!3;CL:0000319!1.10e-13!1;CL:0000149!1.62e-13!4;CL:0000159!1.75e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002586;9.45e-18;3!CL:0000149;1.13e-13;4!CL:0000333;2.66e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.12e-17,3;CL:0000149,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.99e-50;1!UBERON:0006215;9.45e-18;3 | |||
|ontology_enrichment_disease=DOID:3030!1.10e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:169;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;3.99e-50;1!UBERON:0002081;7.14e-26;2!UBERON:0001781;9.45e-18;3!UBERON:0004151;9.45e-18;3!UBERON:0001782;9.45e-18;3!UBERON:0000013;2.66e-11;5!UBERON:0002410;2.66e-11;5!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0002037;1.44e-09;6!UBERON:0000010;7.48e-07;8!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.99e-50,1;UBERON:0002081,7.14e-26,2;UBERON:0010227,7.14e-26,2;UBERON:0004151,9.46e-18,3;UBERON:0001782,1.12e-17,3;UBERON:0005424,1.12e-17,3;UBERON:0001781,1.29e-13,4;UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000010,7.48e-07,8;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
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|short_description=p@chr5:112136808..112136818,+ | |short_description=p@chr5:112136808..112136818,+ | ||
}} | }} |
Latest revision as of 08:45, 30 July 2015
Short description: | p@chr5:112136808..112136818, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:112136808..112136818, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.12e-17 | 3 |
visual pigment cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.99e-50 | 1 |
cardiac atrium | 7.14e-26 | 2 |
future cardiac atrium | 7.14e-26 | 2 |
cardiac chamber | 9.46e-18 | 3 |
pigmented layer of retina | 1.12e-17 | 3 |
presumptive retinal pigmented epithelium | 1.12e-17 | 3 |
layer of retina | 1.29e-13 | 4 |
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
peripheral nervous system | 7.48e-07 | 8 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-09 | 6 |