FFCP PHASE1:Hg19::chr4:99934696..99934700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:99934696..99934700,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr4:99934696..99934700,- | |description=CAGE_peak_at_chr4:99934696..99934700,- | ||
|id=chr4:99934696..99934700,- | |id=chr4:99934696..99934700,- | ||
|ontology_enrichment_celltype=CL:0000359!7.22e-13!32;CL:0000192!2.44e-09!42;CL:0000514!2.44e-09!42;CL:0000393!3.03e-07!60;CL:0000211!3.03e-07!60;CL:0000187!7.59e-07!54 | |ontology_enrichment_celltype=CL:0000359!7.22e-13!32;CL:0000192!2.44e-09!42;CL:0000514!2.44e-09!42;CL:0000393!3.03e-07!60;CL:0000211!3.03e-07!60;CL:0000187!7.59e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002589;1.91e-15;2!CL:1000306;1.70e-08;4!CL:0002547;1.70e-08;4!CL:0002594;2.18e-08;4!CL:0000359;7.66e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.33e-15,2;CL:0000359,1.09e-08,32;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0002594,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.39e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.91e-15;2!DOID:1287;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.73e-09!42;UBERON:0003509!1.73e-09!42;UBERON:0004572!1.73e-09!42;UBERON:0000490!1.06e-08!138;UBERON:0004573!4.56e-08!33;UBERON:0004571!4.56e-08!33;UBERON:0003914!1.25e-07!118;UBERON:0001981!2.20e-07!60;UBERON:0007500!2.20e-07!60;UBERON:0004537!2.20e-07!60;UBERON:0006965!2.20e-07!60;UBERON:0001009!4.38e-07!113;UBERON:0002385!7.40e-07!63;UBERON:0001015!7.40e-07!63;UBERON:0000383!7.40e-07!63 | |ontology_enrichment_uberon=UBERON:0001637!1.73e-09!42;UBERON:0003509!1.73e-09!42;UBERON:0004572!1.73e-09!42;UBERON:0000490!1.06e-08!138;UBERON:0004573!4.56e-08!33;UBERON:0004571!4.56e-08!33;UBERON:0003914!1.25e-07!118;UBERON:0001981!2.20e-07!60;UBERON:0007500!2.20e-07!60;UBERON:0004537!2.20e-07!60;UBERON:0006965!2.20e-07!60;UBERON:0001009!4.38e-07!113;UBERON:0002385!7.40e-07!63;UBERON:0001015!7.40e-07!63;UBERON:0000383!7.40e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.91e-15;2!UBERON:0007204;1.91e-15;2!UBERON:0004797;1.70e-08;4!UBERON:0000415;1.70e-08;4!UBERON:0007240;1.70e-08;4!UBERON:0005742;1.70e-08;4!UBERON:0005734;1.70e-08;4!UBERON:0004664;1.70e-08;4!UBERON:0004663;1.70e-08;4!UBERON:0001310;2.18e-08;4!UBERON:0004573;4.65e-08;33!UBERON:0004571;4.65e-08;33!UBERON:0001637;7.26e-08;42!UBERON:0003509;7.26e-08;42!UBERON:0004572;7.26e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,1.33e-15,2;UBERON:0007204,1.33e-15,2;UBERON:0001637,2.46e-11,42;UBERON:0003509,2.46e-11,42;UBERON:0004572,2.46e-11,42;UBERON:0001009,2.37e-09,112;UBERON:0004573,1.68e-08,33;UBERON:0004571,1.68e-08,33;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0001310,2.43e-08,4;UBERON:0007500,3.36e-08,59;UBERON:0001981,3.36e-08,59;UBERON:0004537,3.36e-08,59;UBERON:0006965,3.36e-08,59;UBERON:0000055,3.62e-07,68 | |||
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|short_description=p@chr4:99934696..99934700,- | |short_description=p@chr4:99934696..99934700,- | ||
}} | }} |
Latest revision as of 08:17, 30 July 2015
Short description: | p@chr4:99934696..99934700, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:99934696..99934700, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.33e-15 | 2 |
vascular associated smooth muscle cell | 1.09e-08 | 32 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
smooth muscle cell of the umbilical artery | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 1.33e-15 | 2 |
brachiocephalic vasculature | 1.33e-15 | 2 |
artery | 2.46e-11 | 42 |
arterial blood vessel | 2.46e-11 | 42 |
arterial system | 2.46e-11 | 42 |
circulatory system | 2.37e-09 | 112 |
systemic artery | 1.68e-08 | 33 |
systemic arterial system | 1.68e-08 | 33 |
artery wall | 1.70e-08 | 4 |
tunica adventitia of artery | 1.70e-08 | 4 |
adventitia | 1.70e-08 | 4 |
tunica adventitia of blood vessel | 1.70e-08 | 4 |
aorta tunica adventitia | 1.70e-08 | 4 |
aorta wall | 1.70e-08 | 4 |
umbilical artery | 2.43e-08 | 4 |
epithelial tube open at both ends | 3.36e-08 | 59 |
blood vessel | 3.36e-08 | 59 |
blood vasculature | 3.36e-08 | 59 |
vascular cord | 3.36e-08 | 59 |
vessel | 3.62e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |