FFCP PHASE1:Hg19::chr4:88898200..88898221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:88898200..88898221,+ | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88898200..88898221,+ | |description=CAGE_peak_at_chr4:88898200..88898221,+ | ||
|id=chr4:88898200..88898221,+ | |id=chr4:88898200..88898221,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.14e-37;6!CL:0000319;3.10e-10;1!CL:0000473;5.04e-07;39!CL:0000234;5.04e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.31e-37,6;CL:0000319,2.37e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.10e-10;1!UBERON:0005425;3.10e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.32e-18;2!DOID:3030;3.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.89e-18,2;DOID:3030,2.37e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;3.10e-10;1!UBERON:0001785;3.10e-10;1!UBERON:0002464;3.10e-10;1!UBERON:0004904;3.10e-10;1!UBERON:0001021;3.10e-10;1!UBERON:0002038;7.22e-10;1!UBERON:0009661;7.22e-10;1!UBERON:0002950;7.22e-10;1!UBERON:0001891;7.22e-10;1 | |||
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| ||
|short_description=p@chr4:88898200..88898221,+ | |short_description=p@chr4:88898200..88898221,+ | ||
}} | }} |
Latest revision as of 07:52, 30 July 2015
Short description: | p@chr4:88898200..88898221, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88898200..88898221, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.31e-37 | 6 |
mucus secreting cell | 2.37e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.59e-10 | 1 |
cranial nerve | 2.59e-10 | 1 |
nerve trunk | 2.59e-10 | 1 |
nerve connecting eye with brain | 2.59e-10 | 1 |
nerve | 2.59e-10 | 1 |
retinal neural layer | 2.59e-10 | 1 |
presumptive neural retina | 2.59e-10 | 1 |
substantia nigra | 6.91e-10 | 1 |
midbrain nucleus | 6.91e-10 | 1 |
regional part of midbrain | 6.91e-10 | 1 |
midbrain | 6.91e-10 | 1 |
presumptive midbrain | 6.91e-10 | 1 |
midbrain neural tube | 6.91e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.89e-18 | 2 |
mucinous adenocarcinoma | 2.37e-10 | 1 |