FFCP PHASE1:Hg19::chr4:77997196..77997224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77997196..77997224,+ | |||
|coexpression_cluster_id=C399 | |||
|description=CAGE_peak_at_chr4:77997196..77997224,+ | |description=CAGE_peak_at_chr4:77997196..77997224,+ | ||
|id=chr4:77997196..77997224,+ | |id=chr4:77997196..77997224,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.30e-19!140;CL:0002057!7.54e-17!42;CL:0000860!3.28e-15!45;CL:0000037!6.44e-15!172;CL:0000566!6.44e-15!172;CL:0002031!4.13e-14!124;CL:0002087!4.62e-14!119;CL:0000988!2.03e-13!182;CL:0002032!1.29e-12!165;CL:0000837!1.29e-12!165;CL:0000766!1.44e-12!76;CL:0000557!4.89e-10!71;CL:0002009!4.78e-09!65;CL:0000839!6.46e-09!70;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000763!4.52e-08!112;CL:0000049!4.52e-08!112;CL:0002393!8.87e-07!9;CL:0002397!8.87e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.30e-19!140;CL:0002057!7.54e-17!42;CL:0000860!3.28e-15!45;CL:0000037!6.44e-15!172;CL:0000566!6.44e-15!172;CL:0002031!4.13e-14!124;CL:0002087!4.62e-14!119;CL:0000988!2.03e-13!182;CL:0002032!1.29e-12!165;CL:0000837!1.29e-12!165;CL:0000766!1.44e-12!76;CL:0000557!4.89e-10!71;CL:0002009!4.78e-09!65;CL:0000839!6.46e-09!70;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000763!4.52e-08!112;CL:0000049!4.52e-08!112;CL:0002393!8.87e-07!9;CL:0002397!8.87e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.99e-14;33!CL:0002057;8.99e-14;33!CL:0000576;1.82e-11;48!CL:0000473;1.34e-09;39!CL:0000234;1.34e-09;39!CL:0000766;3.37e-09;69!CL:0000791;6.23e-09;18!CL:0000789;6.23e-09;18!CL:0002419;6.23e-09;18!CL:0002087;4.61e-08;104!CL:0000094;9.27e-08;8!CL:0002393;9.03e-07;6!CL:0002397;9.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.83e-27,136;CL:0000860,9.38e-23,42;CL:0002057,9.38e-23,42;CL:0002087,1.40e-22,115;CL:0002031,1.35e-20,120;CL:0000037,1.12e-19,168;CL:0000766,2.79e-19,72;CL:0000473,5.44e-19,48;CL:0000234,5.44e-19,48;CL:0000988,1.11e-18,177;CL:0002032,7.68e-17,161;CL:0000837,7.68e-17,161;CL:0000557,7.96e-15,67;CL:0002194,4.38e-14,59;CL:0000576,4.38e-14,59;CL:0000040,4.38e-14,59;CL:0000559,4.38e-14,59;CL:0002009,4.40e-14,61;CL:0000839,2.78e-13,66;CL:0000763,8.56e-10,108;CL:0000049,8.56e-10,108;CL:0002393,4.26e-09,9;CL:0002397,4.26e-09,9;CL:0000791,5.73e-09,18;CL:0000789,5.73e-09,18;CL:0002420,5.73e-09,18;CL:0002419,5.73e-09,18;CL:0000790,5.73e-09,18;CL:0000838,7.45e-08,52;CL:0000094,7.85e-08,8;CL:0000542,1.59e-07,53;CL:0000051,1.59e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-15;42!CL:0000790;6.23e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.46e-11!57;UBERON:0005068!4.46e-11!57;UBERON:0006241!4.46e-11!57;UBERON:0007135!4.46e-11!57;UBERON:0002780!4.93e-11!41;UBERON:0001890!4.93e-11!41;UBERON:0006240!4.93e-11!41;UBERON:0003080!3.13e-10!42;UBERON:0001893!2.29e-09!34;UBERON:0002791!5.81e-09!33;UBERON:0001869!6.01e-09!32;UBERON:0002371!6.71e-09!80;UBERON:0007023!8.12e-09!115;UBERON:0002616!8.13e-09!59;UBERON:0002390!8.85e-09!102;UBERON:0003061!8.85e-09!102;UBERON:0001474!1.00e-08!86;UBERON:0002020!1.26e-08!34;UBERON:0003528!1.26e-08!34;UBERON:0001017!3.37e-08!82;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0002619!1.11e-07!22;UBERON:0001950!1.87e-07!20;UBERON:0005743!2.03e-07!86;UBERON:0002346!5.94e-07!90;UBERON:0003075!8.94e-07!86;UBERON:0007284!8.94e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!4.46e-11!57;UBERON:0005068!4.46e-11!57;UBERON:0006241!4.46e-11!57;UBERON:0007135!4.46e-11!57;UBERON:0002780!4.93e-11!41;UBERON:0001890!4.93e-11!41;UBERON:0006240!4.93e-11!41;UBERON:0003080!3.13e-10!42;UBERON:0001893!2.29e-09!34;UBERON:0002791!5.81e-09!33;UBERON:0001869!6.01e-09!32;UBERON:0002371!6.71e-09!80;UBERON:0007023!8.12e-09!115;UBERON:0002616!8.13e-09!59;UBERON:0002390!8.85e-09!102;UBERON:0003061!8.85e-09!102;UBERON:0001474!1.00e-08!86;UBERON:0002020!1.26e-08!34;UBERON:0003528!1.26e-08!34;UBERON:0001017!3.37e-08!82;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0002619!1.11e-07!22;UBERON:0001950!1.87e-07!20;UBERON:0005743!2.03e-07!86;UBERON:0002346!5.94e-07!90;UBERON:0003075!8.94e-07!86;UBERON:0007284!8.94e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.34e-10;20!UBERON:0002780;2.85e-10;41!UBERON:0001890;2.85e-10;41!UBERON:0002619;4.34e-10;22!UBERON:0001893;6.42e-10;34!UBERON:0001869;7.93e-10;32!UBERON:0002791;1.15e-09;32!UBERON:0003528;5.65e-09;34!UBERON:0002020;5.65e-09;34!UBERON:0000073;1.96e-08;53!UBERON:0002616;1.96e-08;53!UBERON:0000956;3.74e-08;25!UBERON:0000203;3.74e-08;25 | |||
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| ||
|short_description=p@chr4:77997196..77997224,+ | |short_description=p@chr4:77997196..77997224,+ | ||
}} | }} |
Latest revision as of 07:04, 30 July 2015
Short description: | p@chr4:77997196..77997224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77997196..77997224, + |
Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.00e-15 | 53 |
regional part of brain | 8.00e-15 | 53 |
regional part of forebrain | 3.22e-14 | 41 |
forebrain | 3.22e-14 | 41 |
anterior neural tube | 3.22e-14 | 41 |
future forebrain | 3.22e-14 | 41 |
neural tube | 4.89e-14 | 56 |
neural rod | 4.89e-14 | 56 |
future spinal cord | 4.89e-14 | 56 |
neural keel | 4.89e-14 | 56 |
bone marrow | 1.48e-13 | 76 |
hematopoietic system | 9.19e-13 | 98 |
blood island | 9.19e-13 | 98 |
bone element | 1.22e-12 | 82 |
telencephalon | 9.96e-12 | 34 |
cerebral hemisphere | 4.00e-11 | 32 |
regional part of telencephalon | 8.11e-11 | 32 |
neocortex | 1.14e-10 | 20 |
hemolymphoid system | 1.78e-10 | 108 |
brain grey matter | 1.94e-10 | 34 |
gray matter | 1.94e-10 | 34 |
neural plate | 2.28e-10 | 82 |
presumptive neural plate | 2.28e-10 | 82 |
neurectoderm | 2.58e-10 | 86 |
regional part of cerebral cortex | 2.79e-10 | 22 |
brain | 3.86e-10 | 68 |
future brain | 3.86e-10 | 68 |
skeletal element | 4.21e-10 | 90 |
pre-chordal neural plate | 9.60e-10 | 61 |
immune system | 1.75e-09 | 93 |
central nervous system | 1.89e-08 | 81 |
cerebral cortex | 2.58e-08 | 25 |
pallium | 2.58e-08 | 25 |
ecto-epithelium | 2.67e-08 | 104 |
skeletal system | 4.26e-08 | 100 |
nervous system | 1.12e-07 | 89 |