FFCP PHASE1:Hg19::chr15:42566384..42566475,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:42566384..42566475,+
|short_description=p2@GANC
|description=CAGE_peak_2_at_GANC_5end
|association_with_transcript=0bp_to_ENST00000318010,ENST00000440615_...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2595 | |EntrezGene=2595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4139 | |HGNC=4139 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TET4,E7EWB6 | |UniProt=Q8TET4,E7EWB6 | ||
|association_with_transcript=0bp_to_ENST00000318010,ENST00000440615_5end | |||
|cluster_id=chr15:42566384..42566475,+ | |||
|coexpression_cluster_id=C813 | |||
|description=CAGE_peak_2_at_GANC_5end | |||
|id=chr15:42566384..42566475,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.36e-39!140;CL:0002087!1.97e-36!119;CL:0002031!1.10e-35!124;CL:0000037!2.93e-32!172;CL:0000566!2.93e-32!172;CL:0002032!4.16e-30!165;CL:0000837!4.16e-30!165;CL:0000988!1.79e-28!182;CL:0000557!1.21e-24!71;CL:0002009!3.17e-22!65;CL:0002194!4.04e-21!63;CL:0000576!4.04e-21!63;CL:0000040!4.04e-21!63;CL:0000559!4.04e-21!63;CL:0000839!5.37e-21!70;CL:0000766!5.34e-20!76;CL:0000763!3.25e-16!112;CL:0000049!3.25e-16!112;CL:0002057!4.15e-15!42;CL:0000860!6.87e-15!45;CL:0000542!1.47e-13!53;CL:0000051!1.47e-13!53;CL:0000838!3.79e-13!52;CL:0000945!1.10e-11!24;CL:0000826!1.10e-11!24;CL:0000236!4.49e-10!14;CL:0000451!3.42e-08!10;CL:0000134!7.59e-08!358;CL:0000990!4.83e-07!8;CL:0002320!6.70e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.51e-12;48!CL:0000945;4.70e-12;24!CL:0002087;3.56e-11;104!CL:0000473;1.90e-10;39!CL:0000234;1.90e-10;39!CL:0000236;2.88e-10;13!CL:0000766;3.73e-10;69!CL:0000860;6.86e-10;33!CL:0002057;6.86e-10;33!CL:0000738;1.38e-09;136!CL:0000542;1.16e-08;53!CL:0000451;1.68e-08;10!CL:0000990;2.70e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.03e-41,136;CL:0002087,1.77e-38,115;CL:0002031,9.85e-38,120;CL:0000037,1.97e-34,168;CL:0002032,4.94e-32,161;CL:0000837,4.94e-32,161;CL:0000988,3.32e-31,177;CL:0000557,2.51e-26,67;CL:0002009,7.76e-24,61;CL:0002194,1.11e-22,59;CL:0000576,1.11e-22,59;CL:0000040,1.11e-22,59;CL:0000559,1.11e-22,59;CL:0000839,1.64e-22,66;CL:0000766,7.89e-22,72;CL:0000473,8.20e-18,48;CL:0000234,8.20e-18,48;CL:0000763,2.05e-17,108;CL:0000049,2.05e-17,108;CL:0000860,1.96e-15,42;CL:0002057,1.96e-15,42;CL:0000542,4.32e-14,53;CL:0000051,4.32e-14,53;CL:0000838,1.14e-13,52;CL:0000945,5.41e-12,24;CL:0000826,5.41e-12,24;CL:0000236,2.79e-10,14;CL:0000134,1.69e-08,354;CL:0000451,2.36e-08,10;CL:0002320,1.46e-07,361;CL:0000990,3.55e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-11;42!CL:0000051;1.16e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.14e-27!102;UBERON:0003061!4.14e-27!102;UBERON:0002193!1.72e-26!112;UBERON:0002371!1.09e-21!80;UBERON:0001474!4.33e-19!86;UBERON:0002405!3.37e-18!115;UBERON:0004765!1.41e-16!101;UBERON:0001434!1.41e-16!101;UBERON:0002204!5.43e-08!167;UBERON:0007023!3.17e-07!115;UBERON:0003081!3.98e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-28,98;UBERON:0003061,1.82e-28,98;UBERON:0002193,4.32e-28,108;UBERON:0002405,9.48e-24,93;UBERON:0002371,4.69e-23,76;UBERON:0001474,2.74e-20,82;UBERON:0004765,5.04e-18,90;UBERON:0001434,4.82e-16,100;UBERON:0003081,3.98e-09,203;UBERON:0002204,1.66e-07,167;UBERON:0007023,3.64e-07,114 | |||
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| ||
|short_description=p2@GANC | |||
}} | }} |
Latest revision as of 15:47, 17 September 2015
Short description: | p2@GANC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GANC_5end |
Coexpression cluster: | C813_CD19_CD14CD16_CD14_Macrophage_Monocytederived_pancreatic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000318010, ENST00000440615_5end |
EntrezGene: | GANC |
HGNC: | 4139 |
UniProt: | Q8TET4E7EWB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-28 | 98 |
blood island | 1.82e-28 | 98 |
hemolymphoid system | 4.32e-28 | 108 |
immune system | 9.48e-24 | 93 |
bone marrow | 4.69e-23 | 76 |
bone element | 2.74e-20 | 82 |
skeletal element | 5.04e-18 | 90 |
skeletal system | 4.82e-16 | 100 |
lateral plate mesoderm | 3.98e-09 | 203 |
musculoskeletal system | 1.66e-07 | 167 |
adult organism | 3.64e-07 | 114 |