FFCP PHASE1:Hg19::chr4:55143450..55143467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5156 | |EntrezGene=5156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8803 | |HGNC=8803 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=107bp_to_ENST00000507536,uc003hao.1_5end | |association_with_transcript=107bp_to_ENST00000507536,uc003hao.1_5end | ||
|cluster_id=chr4:55143450..55143467,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_10_at_PDGFRA_5end | |description=CAGE_peak_10_at_PDGFRA_5end | ||
|id=chr4:55143450..55143467,+ | |id=chr4:55143450..55143467,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.94e-07!5 | |ontology_enrichment_celltype=CL:0002322!2.94e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.66e-16;39!CL:0000234;2.66e-16;39!CL:0000860;3.08e-12;33!CL:0002057;3.08e-12;33!CL:0000235;3.08e-09;6!CL:0000576;4.98e-07;48!CL:0002032;7.08e-07;1!CL:0000557;7.08e-07;1!CL:0002581;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.86e-16,59;CL:0000576,1.86e-16,59;CL:0000040,1.86e-16,59;CL:0000559,1.86e-16,59;CL:0000557,2.30e-16,67;CL:0002009,7.85e-16,61;CL:0000473,1.34e-15,48;CL:0000234,1.34e-15,48;CL:0000839,1.97e-14,66;CL:0000766,5.25e-13,72;CL:0000860,3.21e-10,42;CL:0002057,3.21e-10,42;CL:0002087,1.28e-09,115;CL:0000235,3.22e-09,6;CL:0002031,4.38e-09,120;CL:0000763,4.93e-09,108;CL:0000049,4.93e-09,108;CL:0000738,1.21e-07,136;CL:0002581,6.49e-07,1;CL:0002032,6.92e-07,161;CL:0000837,6.92e-07,161;CL:0000988,7.79e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.67e-07;1!DOID:0060060;7.08e-07;1!DOID:0060061;7.08e-07;1!DOID:8691;7.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.67e-07,1;DOID:0060060,5.78e-07,1;DOID:0060061,5.78e-07,1;DOID:8691,5.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.41e-10!112;UBERON:0000178!1.10e-08!15;UBERON:0000179!1.10e-08!15;UBERON:0000463!1.10e-08!15;UBERON:0003688!2.15e-08!6;UBERON:0002358!2.15e-08!6;UBERON:0003684!2.15e-08!6;UBERON:0001178!2.15e-08!6;UBERON:0002390!2.85e-08!102;UBERON:0003061!2.85e-08!102 | |ontology_enrichment_uberon=UBERON:0002193!2.41e-10!112;UBERON:0000178!1.10e-08!15;UBERON:0000179!1.10e-08!15;UBERON:0000463!1.10e-08!15;UBERON:0003688!2.15e-08!6;UBERON:0002358!2.15e-08!6;UBERON:0003684!2.15e-08!6;UBERON:0001178!2.15e-08!6;UBERON:0002390!2.85e-08!102;UBERON:0003061!2.85e-08!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-15,98;UBERON:0003061,3.20e-15,98;UBERON:0002371,4.42e-14,76;UBERON:0002193,1.80e-13,108;UBERON:0004765,3.76e-13,90;UBERON:0001474,7.79e-13,82;UBERON:0001434,1.63e-11,100;UBERON:0002405,5.74e-11,93;UBERON:0003081,4.70e-08,203;UBERON:0002204,1.90e-07,167 | |||
|phase1_expression=0,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,16.9738511470069,20.2366958157989,19.1550606209754,0,0,0,0,0,0,0,0,0,17.8119702100827,23.3372479417309,16.6227652707751,0,0,0,18.8436498942557,22.9452484104889,19.7641848681656,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,1.21890816109487,1.72845348674525,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0.365921118388786,0.530119073285941,0.464775771478074,0.725627385107593,2.01856680700503,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.984868024349589,3.51006397708857,4.45893486866185,1.87467667973554,0.503946384596579,0.850650583454319,0,0,0,0.492663237895943,0,0.414656231081544,0.720599767084807,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,5.12446941001296,8.71533458600294,2.7992437530976,1.2162378064119,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,1.02341449813341,0.804269605718038,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0.762520775695299,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,1.90585420366231,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.780103689942349,0,0,0,0,0,0,0.333926115068718,2.47205811340139,0,0,0,0,0.20453736500431,0,7.15391051622157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.63718706865481,0,0.310525913752519,0,0,0,0.300515217994437,1.90402606084398,0,0,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0.327796715891087,0,0.713921808193872,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,16.9738511470069,20.2366958157989,19.1550606209754,0,0,0,0,0,0,0,0,0,17.8119702100827,23.3372479417309,16.6227652707751,0,0,0,18.8436498942557,22.9452484104889,19.7641848681656,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,1.21890816109487,1.72845348674525,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0.365921118388786,0.530119073285941,0.464775771478074,0.725627385107593,2.01856680700503,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.984868024349589,3.51006397708857,4.45893486866185,1.87467667973554,0.503946384596579,0.850650583454319,0,0,0,0.492663237895943,0,0.414656231081544,0.720599767084807,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,5.12446941001296,8.71533458600294,2.7992437530976,1.2162378064119,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,1.02341449813341,0.804269605718038,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0.762520775695299,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,1.90585420366231,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.780103689942349,0,0,0,0,0,0,0.333926115068718,2.47205811340139,0,0,0,0,0.20453736500431,0,7.15391051622157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.63718706865481,0,0.310525913752519,0,0,0,0.300515217994437,1.90402606084398,0,0,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0.327796715891087,0,0.713921808193872,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p10@PDGFRA | |short_description=p10@PDGFRA | ||
}} | }} |
Latest revision as of 00:52, 18 September 2015
Short description: | p10@PDGFRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDGFRA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 107bp_to_ENST00000507536, uc003hao.1_5end |
EntrezGene: | PDGFRA |
HGNC: | 8803 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.86e-16 | 59 |
monocyte | 1.86e-16 | 59 |
monoblast | 1.86e-16 | 59 |
promonocyte | 1.86e-16 | 59 |
granulocyte monocyte progenitor cell | 2.30e-16 | 67 |
macrophage dendritic cell progenitor | 7.85e-16 | 61 |
defensive cell | 1.34e-15 | 48 |
phagocyte | 1.34e-15 | 48 |
myeloid lineage restricted progenitor cell | 1.97e-14 | 66 |
myeloid leukocyte | 5.25e-13 | 72 |
classical monocyte | 3.21e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.21e-10 | 42 |
nongranular leukocyte | 1.28e-09 | 115 |
macrophage | 3.22e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
myeloid cell | 4.93e-09 | 108 |
common myeloid progenitor | 4.93e-09 | 108 |
leukocyte | 1.21e-07 | 136 |
perirenal preadipocyte | 6.49e-07 | 1 |
hematopoietic oligopotent progenitor cell | 6.92e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.92e-07 | 161 |
hematopoietic cell | 7.79e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.20e-15 | 98 |
blood island | 3.20e-15 | 98 |
bone marrow | 4.42e-14 | 76 |
hemolymphoid system | 1.80e-13 | 108 |
skeletal element | 3.76e-13 | 90 |
bone element | 7.79e-13 | 82 |
skeletal system | 1.63e-11 | 100 |
immune system | 5.74e-11 | 93 |
lateral plate mesoderm | 4.70e-08 | 203 |
musculoskeletal system | 1.90e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.67e-07 | 1 |
non-Hodgkin lymphoma | 5.78e-07 | 1 |
cutaneous T cell lymphoma | 5.78e-07 | 1 |
mycosis fungoides | 5.78e-07 | 1 |