FFCP PHASE1:Hg19::chr4:54931877..54931892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:54931877..54931892,- | |||
|description=CAGE_peak_at_chr4:54931877..54931892,- | |description=CAGE_peak_at_chr4:54931877..54931892,- | ||
|id=chr4:54931877..54931892,- | |id=chr4:54931877..54931892,- | ||
|ontology_enrichment_celltype=CL:0000359!1.55e-24!32;CL:0000055!6.14e-20!180;CL:0000192!5.97e-17!42;CL:0000514!5.97e-17!42;CL:0000680!2.26e-15!57;CL:0000056!2.26e-15!57;CL:0000355!2.26e-15!57;CL:0000187!6.92e-14!54;CL:0000183!4.29e-12!59;CL:0002539!7.21e-12!10;CL:0000393!8.96e-12!60;CL:0000211!8.96e-12!60;CL:0002595!1.36e-10!5;CL:0000057!1.07e-08!75;CL:1000306!2.84e-08!4;CL:0002547!2.84e-08!4;CL:0000723!5.83e-08!436;CL:0000048!6.10e-08!430;CL:0000034!1.86e-07!444;CL:0000569!3.85e-07!4;CL:0000011!3.85e-07!4;CL:0000222!4.68e-07!119;CL:0000153!8.68e-07!9;CL:0000447!8.68e-07!9 | |ontology_enrichment_celltype=CL:0000359!1.55e-24!32;CL:0000055!6.14e-20!180;CL:0000192!5.97e-17!42;CL:0000514!5.97e-17!42;CL:0000680!2.26e-15!57;CL:0000056!2.26e-15!57;CL:0000355!2.26e-15!57;CL:0000187!6.92e-14!54;CL:0000183!4.29e-12!59;CL:0002539!7.21e-12!10;CL:0000393!8.96e-12!60;CL:0000211!8.96e-12!60;CL:0002595!1.36e-10!5;CL:0000057!1.07e-08!75;CL:1000306!2.84e-08!4;CL:0002547!2.84e-08!4;CL:0000723!5.83e-08!436;CL:0000048!6.10e-08!430;CL:0000034!1.86e-07!444;CL:0000569!3.85e-07!4;CL:0000011!3.85e-07!4;CL:0000222!4.68e-07!119;CL:0000153!8.68e-07!9;CL:0000447!8.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.59e-44;32!CL:0002595;2.86e-28;5!CL:0000192;7.53e-27;43!CL:0002539;5.75e-20;10!CL:0000187;5.41e-14;55!CL:1000306;1.28e-12;4!CL:0002547;1.28e-12;4!CL:0002593;3.96e-12;2!CL:0002589;4.30e-12;2!CL:0000393;5.11e-10;61!CL:0000211;5.11e-10;61!CL:0002592;2.12e-08;3 | |||
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|ontology_enrichment_development_v019=CL:0000514;7.53e-27;43!CL:0000355;2.12e-14;58!UBERON:0000358;7.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;4.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.43e-07,1 | |||
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| ||
|short_description=p@chr4:54931877..54931892,- | |short_description=p@chr4:54931877..54931892,- | ||
}} | }} |
Latest revision as of 05:39, 30 July 2015
Short description: | p@chr4:54931877..54931892, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:54931877..54931892, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.93e-47 | 32 |
smooth muscle cell | 6.95e-34 | 43 |
smooth muscle myoblast | 6.95e-34 | 43 |
smooth muscle cell of the subclavian artery | 2.11e-28 | 5 |
muscle precursor cell | 3.09e-27 | 58 |
myoblast | 3.09e-27 | 58 |
multi-potent skeletal muscle stem cell | 3.09e-27 | 58 |
muscle cell | 1.14e-25 | 55 |
electrically responsive cell | 9.00e-23 | 61 |
electrically active cell | 9.00e-23 | 61 |
aortic smooth muscle cell | 5.14e-20 | 10 |
mesodermal cell | 6.77e-14 | 121 |
fibroblast of tunica adventitia of artery | 7.60e-13 | 4 |
fibroblast of the aortic adventitia | 7.60e-13 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 3.17e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 3.35e-12 | 2 |
smooth muscle cell of the coronary artery | 2.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.43e-07 | 1 |