FFCP PHASE1:Hg19::chr4:158141806..158141824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2891 | |EntrezGene=2891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4572 | |HGNC=4572 | ||
|TSSclassifier=strong | |||
|UniProt=A8MT92,P42262 | |UniProt=A8MT92,P42262 | ||
|association_with_transcript=0bp_to_ENST00000393815,NM_001083620,uc003ipk.3_5end | |association_with_transcript=0bp_to_ENST00000393815,NM_001083620,uc003ipk.3_5end | ||
|cluster_id=chr4:158141806..158141824,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_GRIA2_5end | |description=CAGE_peak_4_at_GRIA2_5end | ||
|id=chr4:158141806..158141824,+ | |id=chr4:158141806..158141824,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.84e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.89e-24;82!UBERON:0006215;2.56e-10;3!UBERON:0006241;4.21e-09;3!UBERON:0003057;4.21e-09;3!UBERON:0010122;1.34e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.04e-87!57;UBERON:0005068!1.04e-87!57;UBERON:0006241!1.04e-87!57;UBERON:0007135!1.04e-87!57;UBERON:0001017!9.29e-84!82;UBERON:0005743!6.10e-82!86;UBERON:0000073!6.88e-78!94;UBERON:0001016!6.88e-78!94;UBERON:0002616!6.96e-74!59;UBERON:0002780!1.85e-71!41;UBERON:0001890!1.85e-71!41;UBERON:0006240!1.85e-71!41;UBERON:0003080!1.66e-69!42;UBERON:0000955!4.51e-69!69;UBERON:0006238!4.51e-69!69;UBERON:0007023!9.15e-68!115;UBERON:0002346!9.94e-62!90;UBERON:0003075!1.39e-60!86;UBERON:0007284!1.39e-60!86;UBERON:0001893!8.50e-58!34;UBERON:0002020!1.04e-57!34;UBERON:0003528!1.04e-57!34;UBERON:0002791!1.10e-55!33;UBERON:0001869!4.58e-54!32;UBERON:0003056!7.16e-47!61;UBERON:0002619!1.23e-45!22;UBERON:0000924!2.98e-43!173;UBERON:0006601!2.98e-43!173;UBERON:0004121!9.24e-42!169;UBERON:0000153!2.44e-41!129;UBERON:0007811!2.44e-41!129;UBERON:0001950!4.37e-41!20;UBERON:0000033!9.70e-41!123;UBERON:0000956!1.57e-39!25;UBERON:0000203!1.57e-39!25;UBERON:0000025!3.16e-21!194;UBERON:0002420!4.66e-20!9;UBERON:0007245!4.66e-20!9;UBERON:0010009!4.66e-20!9;UBERON:0010011!4.66e-20!9;UBERON:0000454!4.66e-20!9;UBERON:0002308!1.52e-19!9;UBERON:0000125!1.52e-19!9;UBERON:0003076!1.54e-18!15;UBERON:0003057!1.54e-18!15;UBERON:0004111!4.24e-18!241;UBERON:0009663!9.19e-16!7;UBERON:0004732!4.66e-15!13;UBERON:0001894!1.03e-14!7;UBERON:0006222!1.03e-14!7;UBERON:0000200!1.80e-14!6;UBERON:0001871!2.06e-14!7;UBERON:0000477!1.51e-13!286;UBERON:0004733!1.84e-13!12;UBERON:0002028!1.84e-13!12;UBERON:0007277!1.84e-13!12;UBERON:0000349!1.39e-12!5;UBERON:0002298!2.50e-12!8;UBERON:0002021!8.38e-12!5;UBERON:0001872!8.76e-12!5;UBERON:0000475!1.74e-10!365;UBERON:0000369!3.00e-10!4;UBERON:0002435!3.00e-10!4;UBERON:0000204!3.00e-10!4;UBERON:0010082!3.00e-10!4;UBERON:0000483!3.23e-10!309;UBERON:0000119!5.61e-10!312;UBERON:0000064!3.16e-09!219;UBERON:0003296!5.92e-09!4;UBERON:0010133!5.92e-09!4;UBERON:0002680!1.09e-08!9;UBERON:0001895!1.09e-08!9;UBERON:0010092!1.09e-08!9;UBERON:0002771!2.58e-08!3;UBERON:0005383!3.83e-08!3;UBERON:0005382!3.83e-08!3;UBERON:0000922!9.74e-08!612;UBERON:0000988!2.44e-07!3;UBERON:0006331!3.22e-07!3;UBERON:0002240!5.36e-07!3;UBERON:0000062!7.36e-07!511;UBERON:0001896!8.13e-07!3;UBERON:0005290!8.13e-07!3;UBERON:0010096!8.13e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.04e-87!57;UBERON:0005068!1.04e-87!57;UBERON:0006241!1.04e-87!57;UBERON:0007135!1.04e-87!57;UBERON:0001017!9.29e-84!82;UBERON:0005743!6.10e-82!86;UBERON:0000073!6.88e-78!94;UBERON:0001016!6.88e-78!94;UBERON:0002616!6.96e-74!59;UBERON:0002780!1.85e-71!41;UBERON:0001890!1.85e-71!41;UBERON:0006240!1.85e-71!41;UBERON:0003080!1.66e-69!42;UBERON:0000955!4.51e-69!69;UBERON:0006238!4.51e-69!69;UBERON:0007023!9.15e-68!115;UBERON:0002346!9.94e-62!90;UBERON:0003075!1.39e-60!86;UBERON:0007284!1.39e-60!86;UBERON:0001893!8.50e-58!34;UBERON:0002020!1.04e-57!34;UBERON:0003528!1.04e-57!34;UBERON:0002791!1.10e-55!33;UBERON:0001869!4.58e-54!32;UBERON:0003056!7.16e-47!61;UBERON:0002619!1.23e-45!22;UBERON:0000924!2.98e-43!173;UBERON:0006601!2.98e-43!173;UBERON:0004121!9.24e-42!169;UBERON:0000153!2.44e-41!129;UBERON:0007811!2.44e-41!129;UBERON:0001950!4.37e-41!20;UBERON:0000033!9.70e-41!123;UBERON:0000956!1.57e-39!25;UBERON:0000203!1.57e-39!25;UBERON:0000025!3.16e-21!194;UBERON:0002420!4.66e-20!9;UBERON:0007245!4.66e-20!9;UBERON:0010009!4.66e-20!9;UBERON:0010011!4.66e-20!9;UBERON:0000454!4.66e-20!9;UBERON:0002308!1.52e-19!9;UBERON:0000125!1.52e-19!9;UBERON:0003076!1.54e-18!15;UBERON:0003057!1.54e-18!15;UBERON:0004111!4.24e-18!241;UBERON:0009663!9.19e-16!7;UBERON:0004732!4.66e-15!13;UBERON:0001894!1.03e-14!7;UBERON:0006222!1.03e-14!7;UBERON:0000200!1.80e-14!6;UBERON:0001871!2.06e-14!7;UBERON:0000477!1.51e-13!286;UBERON:0004733!1.84e-13!12;UBERON:0002028!1.84e-13!12;UBERON:0007277!1.84e-13!12;UBERON:0000349!1.39e-12!5;UBERON:0002298!2.50e-12!8;UBERON:0002021!8.38e-12!5;UBERON:0001872!8.76e-12!5;UBERON:0000475!1.74e-10!365;UBERON:0000369!3.00e-10!4;UBERON:0002435!3.00e-10!4;UBERON:0000204!3.00e-10!4;UBERON:0010082!3.00e-10!4;UBERON:0000483!3.23e-10!309;UBERON:0000119!5.61e-10!312;UBERON:0000064!3.16e-09!219;UBERON:0003296!5.92e-09!4;UBERON:0010133!5.92e-09!4;UBERON:0002680!1.09e-08!9;UBERON:0001895!1.09e-08!9;UBERON:0010092!1.09e-08!9;UBERON:0002771!2.58e-08!3;UBERON:0005383!3.83e-08!3;UBERON:0005382!3.83e-08!3;UBERON:0000922!9.74e-08!612;UBERON:0000988!2.44e-07!3;UBERON:0006331!3.22e-07!3;UBERON:0002240!5.36e-07!3;UBERON:0000062!7.36e-07!511;UBERON:0001896!8.13e-07!3;UBERON:0005290!8.13e-07!3;UBERON:0010096!8.13e-07!3 | ||
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|short_description=p4@GRIA2 | |short_description=p4@GRIA2 | ||
}} | }} |
Latest revision as of 09:31, 16 September 2015
Short description: | p4@GRIA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRIA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000393815, NM_001083620, uc003ipk.3_5end |
EntrezGene: | GRIA2 |
HGNC: | 4572 |
UniProt: | A8MT92P42262 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.84e-09 | 8 |