FFCP PHASE1:Hg19::chr4:139092367..139092379,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:139092367..139092379,- | |||
|coexpression_cluster_id=C1426 | |||
|description=CAGE_peak_at_chr4:139092367..139092379,- | |description=CAGE_peak_at_chr4:139092367..139092379,- | ||
|id=chr4:139092367..139092379,- | |id=chr4:139092367..139092379,- | ||
|ontology_enrichment_celltype=CL:0000860!5.91e-16!45;CL:0002194!2.88e-15!63;CL:0000576!2.88e-15!63;CL:0000040!2.88e-15!63;CL:0000559!2.88e-15!63;CL:0002057!2.05e-14!42;CL:0002009!2.84e-14!65;CL:0000839!5.84e-14!70;CL:0000557!3.46e-12!71;CL:0000766!2.42e-10!76 | |ontology_enrichment_celltype=CL:0000860!5.91e-16!45;CL:0002194!2.88e-15!63;CL:0000576!2.88e-15!63;CL:0000040!2.88e-15!63;CL:0000559!2.88e-15!63;CL:0002057!2.05e-14!42;CL:0002009!2.84e-14!65;CL:0000839!5.84e-14!70;CL:0000557!3.46e-12!71;CL:0000766!2.42e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.23e-68;33!CL:0002057;7.23e-68;33!CL:0000473;5.39e-52;39!CL:0000234;5.39e-52;39!CL:0000576;1.01e-30;48!CL:0000766;7.67e-18;69!CL:0000763;1.84e-10;100!CL:0002087;2.21e-08;104!CL:0000738;7.27e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.90e-58,42;CL:0002057,3.90e-58,42;CL:0000473,5.47e-58,48;CL:0000234,5.47e-58,48;CL:0002194,3.28e-55,59;CL:0000576,3.28e-55,59;CL:0000040,3.28e-55,59;CL:0000559,3.28e-55,59;CL:0002009,3.67e-53,61;CL:0000839,1.42e-48,66;CL:0000557,9.75e-48,67;CL:0000766,6.72e-44,72;CL:0000763,1.11e-26,108;CL:0000049,1.11e-26,108;CL:0002087,1.40e-24,115;CL:0002031,3.15e-23,120;CL:0000738,1.43e-19,136;CL:0002032,2.52e-15,161;CL:0000837,2.52e-15,161;CL:0000037,2.30e-14,168;CL:0000988,3.04e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-44;42!CL:0000049;1.40e-08;108 | |||
|ontology_enrichment_disease=DOID:0050687!7.79e-11!143;DOID:305!6.85e-10!106;DOID:14566!2.39e-09!239;DOID:162!7.43e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.28e-09!86;UBERON:0002371!4.50e-09!80 | |ontology_enrichment_uberon=UBERON:0001474!3.28e-09!86;UBERON:0002371!4.50e-09!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.45e-41,76;UBERON:0001474,3.90e-40,82;UBERON:0004765,7.31e-36,90;UBERON:0002405,3.02e-32,93;UBERON:0001434,1.78e-31,100;UBERON:0002390,3.34e-30,98;UBERON:0003061,3.34e-30,98;UBERON:0002193,1.11e-26,108;UBERON:0002204,8.50e-17,167;UBERON:0003081,1.95e-13,203;UBERON:0000926,2.87e-08,315;UBERON:0004120,2.87e-08,315;UBERON:0006603,2.87e-08,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,1.16318591023652,1.51150377475524,0.485168122375632,1.39457422143411,5.34518254428373,2.47765096716083,5.75384784644301,2.81776777182011,2.12834006899727,0.344745680736619,1.93645405075148,1.35426486594342,2.63539275359647,1.91034305040492,1.12361742222542,2.14258724659632,1.92557416245656,3.19668562899521,2.30895910130701,2.19410023383795,0.426224750532694,2.32167390902867,6.80862269629368,3.73693349397345,5.7787193009051,3.65038042894141,1.3031330682307,3.02699751316684,2.94622108790052,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.289693037921647,0,0,0,0,0,0,0,0,1.62273696827342,1.56716763569341,0.664789802594326,1.19245312152671,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0,0.367663080345869,0,0.357198913136319,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0.358779271377724,0.640672166455702,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.276149695926898,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0.504641701751257,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.804231779293047,0.370353780634118,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0.951270761172991,0,0,1.23108503043699,0,0.445893486866185,0,0,0,0.53735113621709,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0.958499421966331,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0.468565659970853,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0,0,0,0,0,0.920809889358963,0.34444334449382,0.910455840033585,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.769350375349168,0,0.325378394664303,0,0,0.165018999841176,0,0,1.6068392984416,0.48335359146061,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0.768760269460425,0.127612712494584,0.708104465988849,0,0.31481234683064,0,0,0,0,0,0,1.116475108079,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0,0,0,0,0,0.349934720244983,0.48111056362756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.140669416410513,0.445234820091624,0,1.26675244876796,0,0,0,0,0.246169610922139,0.622079175323615,0.359473404589307,1.25314822272926,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0.87754158861589,0.32681539055697,0.557694977114413,0,0.113942055847001,0.23056390438806,0.269272933229316,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0.468528891450678,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,1.32930774541437,0.992975867626496,0,0,1.70765727617876,0.416024019039416,0,0.195984794828755,0.261177619741208,0.17472666824203,0,0.580537987734511,0.584714536689484,0.410577285266046,0,1.1473296469895,0,0.274083849293502,0.397429223405979,0.189932387867636,0.586654148204409,0.320635281006135,0,0.19980960958213,0.432271251462318,0.80175617316141,0.343189995723929,0.576219191952599,0.99402028452346,0.942776138467182,0.135904206073614,0,2.95794831145333,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,1.08270229666224,0.169346664131569,0,0.544813624446302,0.321506296930038,0,0,0,0,0,0.335434687599266,0,0,0,2.33073541132698,0.383830394638891,0,0,0,1.08599920350743,0.864221491201268,0,0,0.328370082997356,0,0,0,0,1.42211251997706,0.79339561045614,1.88195521672762,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0.122026264901963,0,1.72022758707021,0,0.124192805882767,0,0.1249804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| ||
|short_description=p@chr4:139092367..139092379,- | |short_description=p@chr4:139092367..139092379,- | ||
}} | }} |
Latest revision as of 01:39, 30 July 2015
Short description: | p@chr4:139092367..139092379, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:139092367..139092379, - |
Coexpression cluster: | C1426_CD14_bile_mucinous_lung_large_glioblastoma_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.90e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.90e-58 | 42 |
defensive cell | 5.47e-58 | 48 |
phagocyte | 5.47e-58 | 48 |
monopoietic cell | 3.28e-55 | 59 |
monocyte | 3.28e-55 | 59 |
monoblast | 3.28e-55 | 59 |
promonocyte | 3.28e-55 | 59 |
macrophage dendritic cell progenitor | 3.67e-53 | 61 |
myeloid lineage restricted progenitor cell | 1.42e-48 | 66 |
granulocyte monocyte progenitor cell | 9.75e-48 | 67 |
myeloid leukocyte | 6.72e-44 | 72 |
myeloid cell | 1.11e-26 | 108 |
common myeloid progenitor | 1.11e-26 | 108 |
nongranular leukocyte | 1.40e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 3.15e-23 | 120 |
leukocyte | 1.43e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.52e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-15 | 161 |
hematopoietic stem cell | 2.30e-14 | 168 |
hematopoietic cell | 3.04e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.45e-41 | 76 |
bone element | 3.90e-40 | 82 |
skeletal element | 7.31e-36 | 90 |
immune system | 3.02e-32 | 93 |
skeletal system | 1.78e-31 | 100 |
hematopoietic system | 3.34e-30 | 98 |
blood island | 3.34e-30 | 98 |
hemolymphoid system | 1.11e-26 | 108 |
musculoskeletal system | 8.50e-17 | 167 |
lateral plate mesoderm | 1.95e-13 | 203 |
mesoderm | 2.87e-08 | 315 |
mesoderm-derived structure | 2.87e-08 | 315 |
presumptive mesoderm | 2.87e-08 | 315 |