FFCP PHASE1:Hg19::chr4:123073610..123073629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84162 | |EntrezGene=84162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26953 | |HGNC=26953 | ||
|TSSclassifier=strong | |||
|UniProt=Q2LD37 | |UniProt=Q2LD37 | ||
|association_with_transcript=122bp_to_ENST00000264501_5end | |association_with_transcript=122bp_to_ENST00000264501_5end | ||
|cluster_id=chr4:123073610..123073629,+ | |||
|coexpression_cluster_id=C654 | |||
|description=CAGE_peak_2_at_KIAA1109_5end | |description=CAGE_peak_2_at_KIAA1109_5end | ||
|id=chr4:123073610..123073629,+ | |id=chr4:123073610..123073629,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.85e-17!140;CL:0002031!7.34e-12!124;CL:0002087!3.67e-11!119;CL:0000037!4.96e-11!172;CL:0000566!4.96e-11!172;CL:0002032!3.06e-10!165;CL:0000837!3.06e-10!165;CL:0002057!3.84e-10!42;CL:0000988!1.34e-09!182;CL:0000860!1.89e-09!45;CL:0000766!2.32e-09!76;CL:0000791!1.51e-08!18;CL:0000789!1.51e-08!18;CL:0002420!1.51e-08!18;CL:0002419!1.51e-08!18;CL:0000790!1.51e-08!18;CL:0000084!8.84e-08!25;CL:0000827!8.84e-08!25;CL:0000094!7.42e-07!8 | |ontology_enrichment_celltype=CL:0000738!5.85e-17!140;CL:0002031!7.34e-12!124;CL:0002087!3.67e-11!119;CL:0000037!4.96e-11!172;CL:0000566!4.96e-11!172;CL:0002032!3.06e-10!165;CL:0000837!3.06e-10!165;CL:0002057!3.84e-10!42;CL:0000988!1.34e-09!182;CL:0000860!1.89e-09!45;CL:0000766!2.32e-09!76;CL:0000791!1.51e-08!18;CL:0000789!1.51e-08!18;CL:0002420!1.51e-08!18;CL:0002419!1.51e-08!18;CL:0000790!1.51e-08!18;CL:0000084!8.84e-08!25;CL:0000827!8.84e-08!25;CL:0000094!7.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.82e-13;18!CL:0000789;3.82e-13;18!CL:0002419;3.82e-13;18!CL:0000094;7.87e-12;8!CL:0000084;1.61e-09;25!CL:0000624;3.34e-09;6!CL:0000081;4.97e-08;11!CL:0000625;3.18e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.25e-20,136;CL:0000037,3.74e-15,168;CL:0002032,1.73e-13,161;CL:0000837,1.73e-13,161;CL:0000791,1.77e-13,18;CL:0000789,1.77e-13,18;CL:0002420,1.77e-13,18;CL:0002419,1.77e-13,18;CL:0000790,1.77e-13,18;CL:0000988,1.82e-13,177;CL:0002031,5.38e-13,120;CL:0002087,1.24e-12,115;CL:0000094,3.05e-12,8;CL:0000084,1.21e-09,25;CL:0000827,1.21e-09,25;CL:0000766,1.32e-09,72;CL:0000624,1.83e-09,6;CL:0002393,3.12e-09,9;CL:0002397,3.12e-09,9;CL:0000081,2.59e-08,11;CL:0000838,3.24e-08,52;CL:0000542,6.10e-08,53;CL:0000051,6.10e-08,53;CL:0000860,1.73e-07,42;CL:0002057,1.73e-07,42;CL:0000625,2.35e-07,11;CL:0000473,9.36e-07,48;CL:0000234,9.36e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;3.82e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.16e-19!115;UBERON:0002390!4.22e-08!102;UBERON:0003061!4.22e-08!102;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57;UBERON:0002616!6.27e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!6.16e-19!115;UBERON:0002390!4.22e-08!102;UBERON:0003061!4.22e-08!102;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57;UBERON:0002616!6.27e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.51e-09,114;UBERON:0002390,5.02e-08,98;UBERON:0003061,5.02e-08,98 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0,0,0,1.34465029290355,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,1.96682138424452,6.90892916574983,1.54816123316076,0.919421224478927,0,0,0,0,0,3.87796785972314,2.20598892217156,2.17010870715852,0.223915474239924,0.32389366601898,0,0.872389432677388,0.377875943688809,1.21292030593908,0.929716147622738,1.23350366406548,1.23882548358041,0.863077176966451,0.768482119587302,1.18241114944293,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.898893937780338,2.75475503133812,1.28371610830437,1.27867425159808,0.659702600373432,0.797854630486527,1.70489900213078,0.580418477257168,1.13477044938228,1.24564449799115,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,1.10483290796269,0.949387162322653,2.5350634357433,0.212604299965044,1.25795187305026,0.112328631146495,0.150176892841506,0.32145117339416,3.13514018115373,1.79025009479181,1.82664153764634,0,1.09227722252426,0,0.853460445133014,1.20118796110804,0.574752439954483,1.32208974556972,0.954053754535364,1.70763890732835,2.34894875748376,0.382273228125229,1.32171328579026,4.48406850385229,0,3.34406609193516,5.89516144123747,6.5792479679843,3.8452893939856,1.95553359980154,1.89379122293893,1.94826728407911,2.33961959458865,8.83817722424511,4.87374568083967,3.24964636518019,1.15282187753108,1.30059347559878,0.822189523018381,0.829050053357545,2.02862160014537,0.889719378972363,0.267540828089713,0,1.69964014046349,2.29932296161153,3.09264700934367,3.28925599625354,0.637130828648193,0.651083453856419,0,1.6563263098555,2.43174561193395,2.49861453104692,1.18388626022008,1.64225599384209,8.0642697289893,5.08136371988664,4.77920532813237,0,0,0,0.361439152384566,0,0,2.3858578411533,0,1.22895262313288,0.221729397462564,0.43917392846563,0.327447688744282,0,0,0,0,0.132957960518865,0.476981248610684,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,10.5424333948851,7.75560528296651,0,0,0.379891534993739,1.05927344650575,1.43418310374407,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.505008341862199,0.375355559615893,0,0.877955241761676,0,0.150238058906597,0.113432183160021,0.89694817844431,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,1.18143432568886,0.292311015483596,1.26216887122057,0.0920498986422993,0.161646056818812,1.42003837006646,0.503760491138201,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0.365921118388786,0.397589304964456,0,0.10366105501537,0,0,0,0.643240938192885,0,0.928735856063958,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.245976877086227,0.343135620597051,0.329250856225877,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0,0.93733833986777,0.503946384596579,0.567100388969546,0.895585227028483,0.871901815541886,0.383382679165211,4.92663237895944,0.352193736052904,1.24396869324463,0.144119953416961,0.25248486685276,0,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.224170287987055,9.85153801009636,6.68445482064504,7.82892521306465,0,0,0,0,0.637938751653163,7.49007023947182,5.9832291840805,7.0450637284126,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,4.75566460082641,1.07857100409308,3.842192080924,0.606255142892519,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0.154209693802656,0,0.246381468041427,0,0,0.362578348774867,0.40101294060657,0.0920809889358963,0.68888668898764,0.364182336013434,0.917870904715969,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0.325378394664303,1.03041011647722,0.0915694648183434,0.41254749960294,0,0,0,0.290012154876366,0,0.307007349452259,0.137836572484531,0.429680979473094,0.870100163485371,0.255679882248303,0,0.661139661443912,0.384380134730212,2.16941611240793,0.708104465988849,0,1.88887408098384,0,0,0,0,0.18532421910392,0.143124886741991,1.116475108079,0.949138274156178,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.608731130888112,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0.379473173765715,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0,1.52234282769651,0.764637207142375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| ||
|short_description=p2@KIAA1109 | |short_description=p2@KIAA1109 | ||
}} | }} |
Latest revision as of 00:35, 25 September 2015
Short description: | p2@KIAA1109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIAA1109_5end |
Coexpression cluster: | C654_Eosinophils_Neutrophils_Natural_CD8_CD4_CD14_CD34 |
Association with transcript: | 122bp_to_ENST00000264501_5end |
EntrezGene: | KIAA1109 |
HGNC: | 26953 |
UniProt: | Q2LD37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.25e-20 | 136 |
hematopoietic stem cell | 3.74e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.73e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-13 | 161 |
mature alpha-beta T cell | 1.77e-13 | 18 |
alpha-beta T cell | 1.77e-13 | 18 |
immature T cell | 1.77e-13 | 18 |
mature T cell | 1.77e-13 | 18 |
immature alpha-beta T cell | 1.77e-13 | 18 |
hematopoietic cell | 1.82e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 5.38e-13 | 120 |
nongranular leukocyte | 1.24e-12 | 115 |
granulocyte | 3.05e-12 | 8 |
T cell | 1.21e-09 | 25 |
pro-T cell | 1.21e-09 | 25 |
myeloid leukocyte | 1.32e-09 | 72 |
CD4-positive, alpha-beta T cell | 1.83e-09 | 6 |
intermediate monocyte | 3.12e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.12e-09 | 9 |
blood cell | 2.59e-08 | 11 |
lymphoid lineage restricted progenitor cell | 3.24e-08 | 52 |
lymphocyte | 6.10e-08 | 53 |
common lymphoid progenitor | 6.10e-08 | 53 |
classical monocyte | 1.73e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-07 | 42 |
CD8-positive, alpha-beta T cell | 2.35e-07 | 11 |
defensive cell | 9.36e-07 | 48 |
phagocyte | 9.36e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.51e-09 | 114 |
hematopoietic system | 5.02e-08 | 98 |
blood island | 5.02e-08 | 98 |