FFCP PHASE1:Hg19::chr3:98685922..98685933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98685922..98685933,+ | |||
|description=CAGE_peak_at_chr3:98685922..98685933,+ | |description=CAGE_peak_at_chr3:98685922..98685933,+ | ||
|id=chr3:98685922..98685933,+ | |id=chr3:98685922..98685933,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.67e-09!254;CL:0000306!1.36e-08!4;CL:0002222!1.36e-08!4;CL:0002224!1.36e-08!4;CL:0000077!5.02e-08!19 | |ontology_enrichment_celltype=CL:0000066!5.67e-09!254;CL:0000306!1.36e-08!4;CL:0002222!1.36e-08!4;CL:0002224!1.36e-08!4;CL:0000077!5.02e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000322;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.92e-08;10 | |||
|ontology_enrichment_disease=DOID:4929!1.92e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.89e-11;2!DOID:3093;1.20e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.35e-11,2;DOID:3093,1.29e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.42e-14!11;UBERON:0010077!1.36e-08!4;UBERON:0005389!1.36e-08!4;UBERON:0000484!1.36e-08!4;UBERON:0002546!1.36e-08!4;UBERON:0000965!1.36e-08!4;UBERON:0001803!1.36e-08!4;UBERON:0003073!1.36e-08!4;UBERON:0005426!1.36e-08!4;UBERON:0000019!5.20e-08!19;UBERON:0000047!5.20e-08!19;UBERON:0004088!5.20e-08!19;UBERON:0003072!5.20e-08!19;UBERON:0003071!5.20e-08!19;UBERON:0004128!5.20e-08!19;UBERON:0000970!1.47e-07!20;UBERON:0000076!2.88e-07!8;UBERON:0002104!3.74e-07!21;UBERON:0001456!3.74e-07!21 | |ontology_enrichment_uberon=UBERON:0007625!1.42e-14!11;UBERON:0010077!1.36e-08!4;UBERON:0005389!1.36e-08!4;UBERON:0000484!1.36e-08!4;UBERON:0002546!1.36e-08!4;UBERON:0000965!1.36e-08!4;UBERON:0001803!1.36e-08!4;UBERON:0003073!1.36e-08!4;UBERON:0005426!1.36e-08!4;UBERON:0000019!5.20e-08!19;UBERON:0000047!5.20e-08!19;UBERON:0004088!5.20e-08!19;UBERON:0003072!5.20e-08!19;UBERON:0003071!5.20e-08!19;UBERON:0004128!5.20e-08!19;UBERON:0000970!1.47e-07!20;UBERON:0000076!2.88e-07!8;UBERON:0002104!3.74e-07!21;UBERON:0001456!3.74e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.89e-11;2!UBERON:0002173;3.89e-11;2!UBERON:0002186;3.89e-11;2!UBERON:0004821;7.50e-08;3!UBERON:0007499;7.50e-08;3!UBERON:0003215;7.50e-08;3!UBERON:0010368;7.50e-08;3!UBERON:0009911;7.50e-08;3!UBERON:0002299;7.50e-08;3!UBERON:0006524;7.50e-08;3!UBERON:0008874;7.50e-08;3!UBERON:0002169;7.50e-08;3!UBERON:0004894;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.35e-11,2;UBERON:0002173,3.35e-11,2;UBERON:0002186,3.35e-11,2;UBERON:0004821,6.78e-08,3;UBERON:0003215,6.78e-08,3;UBERON:0010368,6.78e-08,3;UBERON:0009911,6.78e-08,3;UBERON:0002299,6.78e-08,3;UBERON:0006524,6.78e-08,3;UBERON:0008874,6.78e-08,3;UBERON:0002169,6.78e-08,3;UBERON:0004894,6.78e-08,3 | |||
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| ||
|short_description=p@chr3:98685922..98685933,+ | |short_description=p@chr3:98685922..98685933,+ | ||
}} | }} |
Latest revision as of 00:09, 30 July 2015
Short description: | p@chr3:98685922..98685933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98685922..98685933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.35e-11 | 2 |
alveolar duct | 3.35e-11 | 2 |
bronchiole | 3.35e-11 | 2 |
pulmonary alveolus epithelium | 6.78e-08 | 3 |
alveolus | 6.78e-08 | 3 |
pulmonary lobule | 6.78e-08 | 3 |
lobule | 6.78e-08 | 3 |
alveolus of lung | 6.78e-08 | 3 |
alveolar system | 6.78e-08 | 3 |
pulmonary acinus | 6.78e-08 | 3 |
alveolar sac | 6.78e-08 | 3 |
alveolar wall | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.35e-11 | 2 |
nervous system cancer | 1.29e-07 | 11 |