FFCP PHASE1:Hg19::chr3:98518647..98518667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98518647..98518667,- | |||
|coexpression_cluster_id=C504 | |||
|description=CAGE_peak_at_chr3:98518647..98518667,- | |description=CAGE_peak_at_chr3:98518647..98518667,- | ||
|id=chr3:98518647..98518667,- | |id=chr3:98518647..98518667,- | ||
|ontology_enrichment_celltype=CL:0000055!7.65e-16!180;CL:0002321!8.47e-16!248;CL:0000220!1.77e-15!246;CL:0000548!2.94e-12!679;CL:0000004!2.94e-12!679;CL:0000255!2.94e-12!679;CL:0000680!5.10e-12!57;CL:0000056!5.10e-12!57;CL:0000355!5.10e-12!57;CL:0000012!7.62e-12!682;CL:0000187!2.41e-10!54;CL:0000144!2.48e-10!625;CL:0000393!6.46e-10!60;CL:0000211!6.46e-10!60;CL:0000192!2.22e-09!42;CL:0000514!2.22e-09!42;CL:0002371!3.44e-09!591;CL:0000183!3.77e-09!59;CL:0000359!1.60e-08!32;CL:0000003!4.17e-08!722;CL:0000221!6.73e-07!71 | |ontology_enrichment_celltype=CL:0000055!7.65e-16!180;CL:0002321!8.47e-16!248;CL:0000220!1.77e-15!246;CL:0000548!2.94e-12!679;CL:0000004!2.94e-12!679;CL:0000255!2.94e-12!679;CL:0000680!5.10e-12!57;CL:0000056!5.10e-12!57;CL:0000355!5.10e-12!57;CL:0000012!7.62e-12!682;CL:0000187!2.41e-10!54;CL:0000144!2.48e-10!625;CL:0000393!6.46e-10!60;CL:0000211!6.46e-10!60;CL:0000192!2.22e-09!42;CL:0000514!2.22e-09!42;CL:0002371!3.44e-09!591;CL:0000183!3.77e-09!59;CL:0000359!1.60e-08!32;CL:0000003!4.17e-08!722;CL:0000221!6.73e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000569;2.12e-10;4!CL:0000134;4.18e-10;55!CL:0002539;2.59e-09;10!CL:0000048;4.92e-09;58!CL:0000064;5.28e-09;3!CL:0000067;5.28e-09;3!CL:0005012;5.28e-09;3!CL:0002304;5.28e-09;3!CL:0000723;1.15e-08;61!CL:0000034;3.95e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,3.40e-10,4;CL:0000011,3.40e-10,4;CL:0002539,2.75e-09,10;CL:0000064,3.33e-09,3;CL:0000067,3.33e-09,3;CL:0005012,3.33e-09,3;CL:0002304,3.33e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000011;2.12e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!4.84e-12!14;DOID:120!1.13e-09!27;DOID:193!1.86e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-29;14!DOID:120;2.68e-16;27!DOID:193;6.24e-15;29!DOID:0060084;6.66e-10;3!DOID:127;6.66e-10;3!DOID:0060072;1.71e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.83e-30,14;DOID:120,1.50e-16,27;DOID:193,3.66e-15,29;DOID:0060084,6.97e-10,3;DOID:127,6.97e-10,3;DOID:0060072,1.77e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000486!2.30e-13!82;UBERON:0004290!1.76e-11!70;UBERON:0005256!1.50e-10!143;UBERON:0001134!2.63e-10!61;UBERON:0002036!2.63e-10!61;UBERON:0003082!2.63e-10!61;UBERON:0000914!3.19e-10!83;UBERON:0002329!3.19e-10!83;UBERON:0003077!3.19e-10!83;UBERON:0003059!3.19e-10!83;UBERON:0007282!3.19e-10!83;UBERON:0009618!3.19e-10!83;UBERON:0007285!3.19e-10!83;UBERON:0002385!5.13e-10!63;UBERON:0001015!5.13e-10!63;UBERON:0000383!5.13e-10!63;UBERON:0000992!2.19e-09!13;UBERON:0000119!5.25e-09!312;UBERON:0000483!8.04e-09!309;UBERON:0000490!3.87e-08!138;UBERON:0000475!6.26e-08!365;UBERON:0002100!2.97e-07!216;UBERON:0003100!4.09e-07!41;UBERON:0005156!8.21e-07!59;UBERON:0000990!8.21e-07!59;UBERON:0001637!8.87e-07!42;UBERON:0003509!8.87e-07!42;UBERON:0004572!8.87e-07!42 | |ontology_enrichment_uberon=UBERON:0000486!2.30e-13!82;UBERON:0004290!1.76e-11!70;UBERON:0005256!1.50e-10!143;UBERON:0001134!2.63e-10!61;UBERON:0002036!2.63e-10!61;UBERON:0003082!2.63e-10!61;UBERON:0000914!3.19e-10!83;UBERON:0002329!3.19e-10!83;UBERON:0003077!3.19e-10!83;UBERON:0003059!3.19e-10!83;UBERON:0007282!3.19e-10!83;UBERON:0009618!3.19e-10!83;UBERON:0007285!3.19e-10!83;UBERON:0002385!5.13e-10!63;UBERON:0001015!5.13e-10!63;UBERON:0000383!5.13e-10!63;UBERON:0000992!2.19e-09!13;UBERON:0000119!5.25e-09!312;UBERON:0000483!8.04e-09!309;UBERON:0000490!3.87e-08!138;UBERON:0000475!6.26e-08!365;UBERON:0002100!2.97e-07!216;UBERON:0003100!4.09e-07!41;UBERON:0005156!8.21e-07!59;UBERON:0000990!8.21e-07!59;UBERON:0001637!8.87e-07!42;UBERON:0003509!8.87e-07!42;UBERON:0004572!8.87e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;4.81e-15;13!UBERON:0002118;2.38e-13;5!UBERON:0007625;1.92e-11;11!UBERON:0000488;3.53e-11;4!UBERON:0002119;6.47e-11;4!UBERON:0004237;2.59e-09;10!UBERON:0004695;2.59e-09;10!UBERON:0002111;2.59e-09;10!UBERON:0004178;2.59e-09;10!UBERON:0001778;5.28e-09;3!UBERON:0001775;5.28e-09;3!UBERON:0000991;1.24e-08;21!UBERON:0004573;1.45e-08;33!UBERON:0004571;1.45e-08;33!UBERON:0003134;3.96e-08;33!UBERON:0001135;6.74e-08;15!UBERON:0002203;1.93e-07;6!UBERON:0001768;1.93e-07;6!UBERON:0002200;1.93e-07;6!UBERON:0000947;7.27e-07;21!UBERON:0010191;7.27e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.28e-15,13;UBERON:0002118,1.24e-13,5;UBERON:0007625,1.17e-11,11;UBERON:0002119,1.70e-11,4;UBERON:0000488,2.83e-11,4;UBERON:0004237,2.75e-09,10;UBERON:0004695,2.75e-09,10;UBERON:0002111,2.75e-09,10;UBERON:0004178,2.75e-09,10;UBERON:0001778,3.33e-09,3;UBERON:0001775,3.33e-09,3;UBERON:0000991,5.79e-09,21;UBERON:0009196,5.79e-09,21;UBERON:0009117,5.79e-09,21;UBERON:0005564,5.79e-09,21;UBERON:0004573,6.30e-09,33;UBERON:0004571,6.30e-09,33;UBERON:0004176,1.78e-08,22;UBERON:0003100,1.96e-08,41;UBERON:0003134,2.94e-08,37;UBERON:0000474,2.94e-08,37;UBERON:0001135,6.27e-08,15;UBERON:0001637,1.30e-07,42;UBERON:0003509,1.30e-07,42;UBERON:0004572,1.30e-07,42;UBERON:0002203,1.68e-07,6;UBERON:0001768,1.68e-07,6;UBERON:0002200,1.68e-07,6 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,2.00146596706261,0.446961094427288,0.872338524100369,0,1.89515962028049,0,0.982935746006035,0,0.218441372130172,0.527533956456907,0.37129905888014,0,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,1.50561867580173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,2.9305793320861,1.55210578223795,2.98638271356629,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0,1.10047216776027,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,1.01304409331664,0.132409180813219,0.860509862246441,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.302714855289863,0,0.234321431833797,0.936480230490962,0,0.597794722207204,0.352303495931295,0.485618833104395,0.280901613404497,0,0.61417158655884,0.103325781175765,0,0,0,0,0.505008341862199,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0.635795703478686,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.276149695926898,0,1.06502877754984,0.403008392910561,0,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.354920400119532,0,0.723033089650446,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,1.20097467208968,0.768251997860379,0,0.703702806881416,0.185176890317059,0,0,4.3299402607582,1.85488647960123,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.806026704325635,0.290633938513962,1.15014803749563,0.492663237895943,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.36669142910475,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,1.62868092146868,0.710783897485092,0.791951872933429,1.20575750823834,0,1.99945982364114,0,0,0,0.239624855491583,0,0,3.04040744001916,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,1.50051156317903,0.271265023699736,0,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,1.28683136914886,0,1.85051632563187,2.48586415438378,0.821271560138091,1.03850885836724,1.16210378459959,0.120859449591622,2.40607764363942,0.552485933615378,0.34444334449382,0.728364672026868,0.393373244878272,0.451199612907412,2.31046011313244,0,0,3.4832037534649,0,0,1.72732732881711,0,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0,0,2.82095137628028,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.770243085573222,0,0.275673144969061,0.429680979473094,0.435050081742686,0.596586391912706,0.178064071293475,0,0.384380134730212,0,0.4046311234222,3.71876439437829,2.83331112147576,2.0911118104818,0.308033580176089,0.532306030317022,0,0.9266210955196,0,0.372158369359667,0.316379424718726,0.762520775695299,0,0,0.318203247925937,1.56989728039846,0,1.64722217841633,0.235624804691373,0,0,0.421258456238981,0,1.94970791705028,0,0.136499911407986,0.141405431953713,0,0,1.99031692572366,2.19225442626881,0.578775534266688,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0.102268682502155,0,0,0.988551862620595,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,2.53197677433632,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.970722711091971,0.347119476670262,0,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0.548167698587004,0.596143835108969,0.0633107959558787,0,0.320635281006135,0,0,0,0,0,1.1524383839052,0.621262677827163,0.235694034616795,1.22313785466253,0.732219924186332,0.611989305817931,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,3.25799761052228,3.45688596480507,6.53174720218818,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.249960815924213,0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| ||
|short_description=p@chr3:98518647..98518667,- | |short_description=p@chr3:98518647..98518667,- | ||
}} | }} |
Latest revision as of 00:07, 30 July 2015
Short description: | p@chr3:98518647..98518667, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98518647..98518667, - |
Coexpression cluster: | C504_leiomyoma_Lens_Ciliary_mesenchymal_Smooth_Mesothelial_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 3.40e-10 | 4 |
migratory trunk neural crest cell | 3.40e-10 | 4 |
aortic smooth muscle cell | 2.75e-09 | 10 |
ciliated cell | 3.33e-09 | 3 |
ciliated epithelial cell | 3.33e-09 | 3 |
multi-ciliated epithelial cell | 3.33e-09 | 3 |
non-pigmented ciliary epithelial cell | 3.33e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.28e-15 | 13 |
right ovary | 1.24e-13 | 5 |
pigment epithelium of eye | 1.17e-11 | 11 |
left ovary | 1.70e-11 | 4 |
atypical epithelium | 2.83e-11 | 4 |
blood vessel smooth muscle | 2.75e-09 | 10 |
arterial system smooth muscle | 2.75e-09 | 10 |
artery smooth muscle tissue | 2.75e-09 | 10 |
aorta smooth muscle tissue | 2.75e-09 | 10 |
ciliary epithelium | 3.33e-09 | 3 |
ciliary body | 3.33e-09 | 3 |
gonad | 5.79e-09 | 21 |
indifferent external genitalia | 5.79e-09 | 21 |
indifferent gonad | 5.79e-09 | 21 |
gonad primordium | 5.79e-09 | 21 |
systemic artery | 6.30e-09 | 33 |
systemic arterial system | 6.30e-09 | 33 |
external genitalia | 1.78e-08 | 22 |
female organism | 1.96e-08 | 41 |
female reproductive organ | 2.94e-08 | 37 |
female reproductive system | 2.94e-08 | 37 |
smooth muscle tissue | 6.27e-08 | 15 |
artery | 1.30e-07 | 42 |
arterial blood vessel | 1.30e-07 | 42 |
arterial system | 1.30e-07 | 42 |
vasculature of eye | 1.68e-07 | 6 |
uvea | 1.68e-07 | 6 |
vasculature of head | 1.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.83e-30 | 14 |
female reproductive organ cancer | 1.50e-16 | 27 |
reproductive organ cancer | 3.66e-15 | 29 |
cell type benign neoplasm | 6.97e-10 | 3 |
leiomyoma | 6.97e-10 | 3 |
benign neoplasm | 1.77e-07 | 4 |