FFCP PHASE1:Hg19::chr3:69812798..69812824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFN0,B4DJL2,O75030 | |UniProt=E9PFN0,B4DJL2,O75030 | ||
|association_with_transcript=91bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |association_with_transcript=91bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | ||
|cluster_id=chr3:69812798..69812824,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_8_at_MITF_5end | |description=CAGE_peak_8_at_MITF_5end | ||
|id=chr3:69812798..69812824,+ | |id=chr3:69812798..69812824,+ | ||
|ontology_enrichment_celltype=CL:1000497!9.86e-22!18;CL:0002518!9.86e-22!18;CL:1000507!5.83e-19!12;CL:1000494!5.83e-19!12;CL:1000449!7.83e-17!16;CL:0002681!3.18e-10!13;CL:0002584!3.18e-10!13 | |ontology_enrichment_celltype=CL:1000497!9.86e-22!18;CL:0002518!9.86e-22!18;CL:1000507!5.83e-19!12;CL:1000494!5.83e-19!12;CL:1000449!7.83e-17!16;CL:0002681!3.18e-10!13;CL:0002584!3.18e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.71e-31;17!CL:0002518;3.71e-31;17!CL:1000507;2.81e-27;10!CL:1000494;2.81e-27;10!CL:1000449;3.37e-18;15!CL:0000239;1.64e-15;3!CL:1000615;1.64e-15;3!CL:0002306;1.64e-15;3!CL:0002681;9.13e-09;12!CL:0002584;9.13e-09;12!CL:0000650;9.27e-07;2!CL:1000500;9.27e-07;2!CL:1000618;9.27e-07;2!CL:1001318;9.27e-07;2!CL:0002173;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,4.07e-31,17;CL:0002518,4.07e-31,17;CL:1000507,3.32e-27,10;CL:1000494,3.32e-27,10;CL:1000449,3.76e-18,15;CL:0000239,1.77e-15,3;CL:1000615,1.77e-15,3;CL:0002306,1.77e-15,3;CL:0002681,1.06e-08,12;CL:0002584,1.06e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.91e-12;1!UBERON:0003918;8.08e-11;10!UBERON:0007687;8.08e-11;10 | |||
|ontology_enrichment_disease=DOID:1287!3.38e-07!4;DOID:4468!7.58e-07!2;DOID:114!8.03e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.41e-07;2!DOID:114;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.36e-07,39;DOID:4468,5.41e-07,2;DOID:114,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.72e-31!27;UBERON:0003918!2.72e-31!27;UBERON:0005095!2.72e-31!27;UBERON:0007687!2.72e-31!27;UBERON:0006554!3.34e-26!44;UBERON:0000489!1.30e-25!32;UBERON:0001008!1.75e-25!45;UBERON:0000080!4.28e-21!18;UBERON:0002120!4.28e-21!18;UBERON:0004875!4.28e-21!18;UBERON:0005721!4.28e-21!18;UBERON:0005754!4.28e-21!18;UBERON:0007297!4.28e-21!18;UBERON:0009773!5.83e-19!12;UBERON:0001231!5.83e-19!12;UBERON:0004810!5.83e-19!12;UBERON:0006555!7.03e-19!17;UBERON:0005103!7.03e-19!17;UBERON:0000083!7.03e-19!17;UBERON:0009201!7.03e-19!17;UBERON:0004819!7.03e-19!17;UBERON:0006553!7.03e-19!17;UBERON:0003074!7.03e-19!17;UBERON:0003060!7.03e-19!17;UBERON:0004876!1.09e-18!20;UBERON:0003887!1.17e-17!21;UBERON:0004211!7.83e-17!16;UBERON:0001285!7.83e-17!16;UBERON:0007684!7.83e-17!16;UBERON:0003220!7.83e-17!16;UBERON:0004208!7.83e-17!16;UBERON:0003064!7.42e-16!37;UBERON:0003103!8.63e-15!69;UBERON:0000058!1.05e-13!26;UBERON:0005172!7.11e-13!55;UBERON:0005173!7.11e-13!55;UBERON:0002417!3.72e-11!61;UBERON:0000916!3.72e-11!61;UBERON:0001225!3.18e-10!13;UBERON:0008987!3.18e-10!13;UBERON:0001851!4.27e-08!16;UBERON:0000353!1.49e-07!17;UBERON:0001954!8.27e-07!2;UBERON:0003022!8.27e-07!2;UBERON:0002421!8.27e-07!2;UBERON:0002600!8.27e-07!2 | |ontology_enrichment_uberon=UBERON:0002113!2.72e-31!27;UBERON:0003918!2.72e-31!27;UBERON:0005095!2.72e-31!27;UBERON:0007687!2.72e-31!27;UBERON:0006554!3.34e-26!44;UBERON:0000489!1.30e-25!32;UBERON:0001008!1.75e-25!45;UBERON:0000080!4.28e-21!18;UBERON:0002120!4.28e-21!18;UBERON:0004875!4.28e-21!18;UBERON:0005721!4.28e-21!18;UBERON:0005754!4.28e-21!18;UBERON:0007297!4.28e-21!18;UBERON:0009773!5.83e-19!12;UBERON:0001231!5.83e-19!12;UBERON:0004810!5.83e-19!12;UBERON:0006555!7.03e-19!17;UBERON:0005103!7.03e-19!17;UBERON:0000083!7.03e-19!17;UBERON:0009201!7.03e-19!17;UBERON:0004819!7.03e-19!17;UBERON:0006553!7.03e-19!17;UBERON:0003074!7.03e-19!17;UBERON:0003060!7.03e-19!17;UBERON:0004876!1.09e-18!20;UBERON:0003887!1.17e-17!21;UBERON:0004211!7.83e-17!16;UBERON:0001285!7.83e-17!16;UBERON:0007684!7.83e-17!16;UBERON:0003220!7.83e-17!16;UBERON:0004208!7.83e-17!16;UBERON:0003064!7.42e-16!37;UBERON:0003103!8.63e-15!69;UBERON:0000058!1.05e-13!26;UBERON:0005172!7.11e-13!55;UBERON:0005173!7.11e-13!55;UBERON:0002417!3.72e-11!61;UBERON:0000916!3.72e-11!61;UBERON:0001225!3.18e-10!13;UBERON:0008987!3.18e-10!13;UBERON:0001851!4.27e-08!16;UBERON:0000353!1.49e-07!17;UBERON:0001954!8.27e-07!2;UBERON:0003022!8.27e-07!2;UBERON:0002421!8.27e-07!2;UBERON:0002600!8.27e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.21e-28;24!UBERON:0011143;1.21e-28;24!UBERON:0004211;2.81e-27;10!UBERON:0009773;2.81e-27;10!UBERON:0001231;2.81e-27;10!UBERON:0004810;2.81e-27;10!UBERON:0000489;1.42e-23;29!UBERON:0006554;9.22e-23;30!UBERON:0001008;9.22e-23;30!UBERON:0006555;3.37e-18;15!UBERON:0004819;3.37e-18;15!UBERON:0001285;3.37e-18;15!UBERON:0007684;3.37e-18;15!UBERON:0006853;1.64e-15;3!UBERON:0007685;1.64e-15;3!UBERON:0004134;1.64e-15;3!UBERON:0006834;1.11e-12;1!UBERON:0007029;2.91e-12;1!UBERON:0001225;9.13e-09;12!UBERON:0008987;9.13e-09;12!UBERON:0003103;3.71e-08;61!UBERON:0005172;5.19e-08;52!UBERON:0005173;5.19e-08;52!UBERON:0002417;1.66e-07;58!UBERON:0000916;1.66e-07;58!UBERON:0001851;4.11e-07;15!UBERON:0000353;4.11e-07;15!UBERON:0003567;9.27e-07;2!UBERON:0003838;9.27e-07;2!UBERON:0003586;9.27e-07;2!UBERON:0005169;9.27e-07;2!UBERON:0002321;9.27e-07;2!UBERON:0005215;9.27e-07;2!UBERON:0002303;9.27e-07;2!UBERON:0002319;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.32e-27,10;UBERON:0002113,2.36e-26,26;UBERON:0003918,2.36e-26,26;UBERON:0011143,2.36e-26,26;UBERON:0005095,2.36e-26,26;UBERON:0007687,2.36e-26,26;UBERON:0000489,5.62e-22,31;UBERON:0004211,3.76e-18,15;UBERON:0009773,3.76e-18,15;UBERON:0001231,3.76e-18,15;UBERON:0001285,3.76e-18,15;UBERON:0007684,3.76e-18,15;UBERON:0004208,3.76e-18,15;UBERON:0006555,5.12e-17,16;UBERON:0004819,5.12e-17,16;UBERON:0006853,1.77e-15,3;UBERON:0007685,1.77e-15,3;UBERON:0004134,1.77e-15,3;UBERON:0006554,3.27e-14,47;UBERON:0001008,6.73e-14,48;UBERON:0006834,1.11e-12,1;UBERON:0007029,1.96e-12,1;UBERON:0005172,2.95e-12,54;UBERON:0005173,2.95e-12,54;UBERON:0003103,4.50e-12,68;UBERON:0002417,6.08e-11,60;UBERON:0000916,6.08e-11,60;UBERON:0001225,1.06e-08,12;UBERON:0008987,1.06e-08,12;UBERON:0001851,4.62e-07,15;UBERON:0000353,4.62e-07,15;UBERON:0009569,7.12e-07,112 | |||
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| ||
|short_description=p8@MITF | |short_description=p8@MITF | ||
}} | }} |
Latest revision as of 12:13, 19 September 2015
Short description: | p8@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 91bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 4.07e-31 | 17 |
kidney epithelial cell | 4.07e-31 | 17 |
kidney tubule cell | 3.32e-27 | 10 |
nephron tubule epithelial cell | 3.32e-27 | 10 |
epithelial cell of nephron | 3.76e-18 | 15 |
brush border epithelial cell | 1.77e-15 | 3 |
kidney cortex tubule cell | 1.77e-15 | 3 |
epithelial cell of proximal tubule | 1.77e-15 | 3 |
kidney cortical cell | 1.06e-08 | 12 |
renal cortical epithelial cell | 1.06e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.32e-27 | 10 |
kidney | 2.36e-26 | 26 |
kidney mesenchyme | 2.36e-26 | 26 |
upper urinary tract | 2.36e-26 | 26 |
kidney rudiment | 2.36e-26 | 26 |
kidney field | 2.36e-26 | 26 |
cavitated compound organ | 5.62e-22 | 31 |
nephron epithelium | 3.76e-18 | 15 |
renal tubule | 3.76e-18 | 15 |
nephron tubule | 3.76e-18 | 15 |
nephron | 3.76e-18 | 15 |
uriniferous tubule | 3.76e-18 | 15 |
nephrogenic mesenchyme | 3.76e-18 | 15 |
excretory tube | 5.12e-17 | 16 |
kidney epithelium | 5.12e-17 | 16 |
renal cortex tubule | 1.77e-15 | 3 |
region of nephron tubule | 1.77e-15 | 3 |
proximal tubule | 1.77e-15 | 3 |
urinary system structure | 3.27e-14 | 47 |
renal system | 6.73e-14 | 48 |
uterus or analog | 1.11e-12 | 1 |
surface | 1.96e-12 | 1 |
abdomen element | 2.95e-12 | 54 |
abdominal segment element | 2.95e-12 | 54 |
compound organ | 4.50e-12 | 68 |
abdominal segment of trunk | 6.08e-11 | 60 |
abdomen | 6.08e-11 | 60 |
cortex of kidney | 1.06e-08 | 12 |
renal parenchyma | 1.06e-08 | 12 |
cortex | 4.62e-07 | 15 |
parenchyma | 4.62e-07 | 15 |
subdivision of trunk | 7.12e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.36e-07 | 39 |
clear cell adenocarcinoma | 5.41e-07 | 2 |
heart disease | 8.52e-07 | 2 |