FFCP PHASE1:Hg19::chr15:33023873..33023883,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:33023873..33023883,+
|short_description=p22@GREM1
|description=CAGE_peak_22_at_GREM1_5end
|association_with_transcript=-254bp_to_AL359060_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26585 | |EntrezGene=26585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |HGNC=2001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-254bp_to_AL359060_5end | |||
|cluster_id=chr15:33023873..33023883,+ | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_22_at_GREM1_5end | |||
|id=chr15:33023873..33023883,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.18e-29!180;CL:0000057!2.12e-23!75;CL:0002334!3.48e-17!12;CL:0000048!5.86e-15!430;CL:0000723!2.45e-14!436;CL:0000034!1.55e-13!444;CL:0002620!8.36e-13!23;CL:0000499!3.45e-09!27;CL:0000680!4.64e-09!57;CL:0000056!4.64e-09!57;CL:0000355!4.64e-09!57;CL:0000192!6.37e-09!42;CL:0000514!6.37e-09!42;CL:0000153!7.31e-09!9;CL:0000447!7.31e-09!9;CL:0000134!2.39e-08!358;CL:0002320!3.25e-08!365;CL:0002371!6.18e-08!591;CL:0000219!3.22e-07!390;CL:0000187!4.46e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.09e-26;12!CL:0002579;5.07e-13;3!CL:0002620;4.11e-10;23!CL:0002583;2.85e-09;2!CL:0000057;5.57e-09;73!CL:0002617;6.73e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,9.79e-26,12;CL:0000057,6.63e-25,76;CL:0002579,9.82e-13,3;CL:0002620,7.77e-10,23;CL:0000134,1.65e-09,354;CL:0002617,2.15e-09,2;CL:0002583,2.87e-09,2;CL:0000048,3.37e-09,427;CL:0002320,3.71e-09,361;CL:0000723,6.11e-09,433;CL:0000034,1.32e-08,441;CL:0000219,6.45e-08,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.43e-08!14;DOID:17!5.17e-08!5;DOID:450!5.17e-08!5;DOID:66!5.17e-08!5;DOID:423!5.17e-08!5;DOID:0080000!5.17e-08!5;DOID:11722!5.17e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.44e-13;5!DOID:450;3.44e-13;5!DOID:66;3.44e-13;5!DOID:423;3.44e-13;5!DOID:0080000;3.44e-13;5!DOID:11722;3.44e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.60e-13,5;DOID:450,5.60e-13,5;DOID:66,5.60e-13,5;DOID:423,5.60e-13,5;DOID:0080000,5.60e-13,5;DOID:11722,5.60e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.12e-10!83;UBERON:0002329!2.12e-10!83;UBERON:0003077!2.12e-10!83;UBERON:0003059!2.12e-10!83;UBERON:0007282!2.12e-10!83;UBERON:0009618!2.12e-10!83;UBERON:0007285!2.12e-10!83;UBERON:0002199!3.42e-09!45;UBERON:0002416!3.42e-09!45;UBERON:0003102!5.50e-09!95;UBERON:0002097!1.52e-08!40;UBERON:0004290!2.31e-08!70;UBERON:0002384!2.58e-08!375;UBERON:0002385!3.05e-08!63;UBERON:0001015!3.05e-08!63;UBERON:0000383!3.05e-08!63;UBERON:0000486!4.18e-08!82;UBERON:0001134!5.05e-08!61;UBERON:0002036!5.05e-08!61;UBERON:0003082!5.05e-08!61;UBERON:0001135!6.63e-08!15;UBERON:0005256!2.18e-07!143;UBERON:0004457!5.49e-07!12;UBERON:0000042!5.49e-07!12;UBERON:0003688!8.21e-07!6;UBERON:0002358!8.21e-07!6;UBERON:0003684!8.21e-07!6;UBERON:0001178!8.21e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.18e-11;6!UBERON:0002358;4.18e-11;6!UBERON:0003684;4.18e-11;6!UBERON:0001178;4.18e-11;6!UBERON:0004457;4.21e-11;9!UBERON:0000042;4.21e-11;9!UBERON:0005406;2.00e-09;2!UBERON:0002118;6.74e-08;5!UBERON:0002199;6.80e-07;46!UBERON:0002416;6.80e-07;46!UBERON:0002384;7.93e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.50e-11,6;UBERON:0002358,4.50e-11,6;UBERON:0003684,4.50e-11,6;UBERON:0001178,4.50e-11,6;UBERON:0005406,1.54e-09,2;UBERON:0002384,1.97e-09,371;UBERON:0002199,1.99e-08,46;UBERON:0002416,1.99e-08,46;UBERON:0004457,3.00e-08,12;UBERON:0000042,3.00e-08,12;UBERON:0002118,6.09e-08,5;UBERON:0003102,5.57e-07,99 | |||
|phase1_expression=1.63510541343501,1.92690471501885,0.704772020479856,0,1.78784437770915,4.36169262050184,0,0,0,0,0,0,0,0,0,4.70627602516243,2.41077811209591,2.92124036154949,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.491337269247072,0,3.56400857184616,5.43987244412825,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,3.98434134538726,1.95309476578576,0,1.07633781413317,1.06778694409284,2.11931901159562,1.20036438433761,0.412210116953756,0.772921620136887,2.04728541964749,1.0126579934476,0.876933046450788,2.01947019395292,0.644349290496095,0,0.710019185033229,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0,0,0,0,9.00537313470039,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,2.49800584316026,1.41932173530541,1.05427273493442,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.767309866440312,3.08726103876381,1.15325234330131,1.02341449813341,4.66476371316462,1.48418066444991,2.46735510084249,1.24293207719189,0.246381468041427,1.03850885836724,1.04589340613963,0,0,0,0.34444334449382,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0,0,0.35667105148125,0.709522128141196,0.211107635297664,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0.457680136793847,0.302461847526478,0.15543720058278,1.03498604992744,0.477890301491107,0,0.310525913752519,0.414706207840855,0.797525143673985,1.04349012362347,0.150257608997218,0,0,2.72772988803839,0.107410557042488,1.39210127963548,1.19428766609585,0,0.686791410365586,1.01024846629776,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,1.52934403219035,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,1.85997509083376,0.462175628631418,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=1.63510541343501,1.92690471501885,0.704772020479856,0,1.78784437770915,4.36169262050184,0,0,0,0,0,0,0,0,0,4.70627602516243,2.41077811209591,2.92124036154949,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.491337269247072,0,3.56400857184616,5.43987244412825,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,3.98434134538726,1.95309476578576,0,1.07633781413317,1.06778694409284,2.11931901159562,1.20036438433761,0.412210116953756,0.772921620136887,2.04728541964749,1.0126579934476,0.876933046450788,2.01947019395292,0.644349290496095,0,0.710019185033229,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0,0,0,0,9.00537313470039,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,2.49800584316026,1.41932173530541,1.05427273493442,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.767309866440312,3.08726103876381,1.15325234330131,1.02341449813341,4.66476371316462,1.48418066444991,2.46735510084249,1.24293207719189,0.246381468041427,1.03850885836724,1.04589340613963,0,0,0,0.34444334449382,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0,0,0.35667105148125,0.709522128141196,0.211107635297664,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0.457680136793847,0.302461847526478,0.15543720058278,1.03498604992744,0.477890301491107,0,0.310525913752519,0.414706207840855,0.797525143673985,1.04349012362347,0.150257608997218,0,0,2.72772988803839,0.107410557042488,1.39210127963548,1.19428766609585,0,0.686791410365586,1.01024846629776,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,1.52934403219035,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,1.85997509083376,0.462175628631418,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p22@GREM1 | |||
}} | }} |
Latest revision as of 04:47, 17 September 2015
Short description: | p22@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | -254bp_to_AL359060_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 9.79e-26 | 12 |
fibroblast | 6.63e-25 | 76 |
omentum preadipocyte | 9.82e-13 | 3 |
skin fibroblast | 7.77e-10 | 23 |
mesenchymal cell | 1.65e-09 | 354 |
adipocyte of breast | 2.15e-09 | 2 |
subcutaneous preadipocyte | 2.87e-09 | 2 |
multi fate stem cell | 3.37e-09 | 427 |
connective tissue cell | 3.71e-09 | 361 |
somatic stem cell | 6.11e-09 | 433 |
stem cell | 1.32e-08 | 441 |
motile cell | 6.45e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.50e-11 | 6 |
peritoneum | 4.50e-11 | 6 |
abdominal cavity | 4.50e-11 | 6 |
visceral peritoneum | 4.50e-11 | 6 |
perirenal fat | 1.54e-09 | 2 |
connective tissue | 1.97e-09 | 371 |
integument | 1.99e-08 | 46 |
integumental system | 1.99e-08 | 46 |
cavity lining | 3.00e-08 | 12 |
serous membrane | 3.00e-08 | 12 |
right ovary | 6.09e-08 | 5 |
surface structure | 5.57e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.60e-13 | 5 |
myotonic disease | 5.60e-13 | 5 |
muscle tissue disease | 5.60e-13 | 5 |
myopathy | 5.60e-13 | 5 |
muscular disease | 5.60e-13 | 5 |
myotonic dystrophy | 5.60e-13 | 5 |