FFCP PHASE1:Hg19::chr3:46283839..46283854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1232 | |EntrezGene=1232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1604 | |HGNC=1604 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWL6,Q8TDP4,P51677,Q8TDP5,Q8TDP6 | |UniProt=F5GWL6,Q8TDP4,P51677,Q8TDP5,Q8TDP6 | ||
|association_with_transcript=-17bp_to_ENST00000541018,ENST00000545097,NM_001164680,NM_001837,NM_178328,NM_178329_5end | |association_with_transcript=-17bp_to_ENST00000541018,ENST00000545097,NM_001164680,NM_001837,NM_178328,NM_178329_5end | ||
|cluster_id=chr3:46283839..46283854,+ | |||
|coexpression_cluster_id=C1311 | |||
|description=CAGE_peak_4_at_CCR3_5end | |description=CAGE_peak_4_at_CCR3_5end | ||
|id=chr3:46283839..46283854,+ | |id=chr3:46283839..46283854,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.16e-25!42;CL:0000766!4.54e-24!76;CL:0000860!3.81e-23!45;CL:0000738!4.94e-22!140;CL:0002194!9.25e-18!63;CL:0000576!9.25e-18!63;CL:0000040!9.25e-18!63;CL:0000559!9.25e-18!63;CL:0002009!4.96e-17!65;CL:0000037!4.98e-17!172;CL:0000566!4.98e-17!172;CL:0000763!3.35e-16!112;CL:0000049!3.35e-16!112;CL:0000988!1.63e-15!182;CL:0000839!2.17e-15!70;CL:0000557!4.32e-15!71;CL:0002032!6.86e-15!165;CL:0000837!6.86e-15!165;CL:0002087!1.63e-14!119;CL:0000094!2.99e-13!8;CL:0002031!1.47e-12!124;CL:0000775!4.45e-10!3;CL:0000081!2.11e-09!11;CL:0000784!4.47e-09!3;CL:0000771!3.20e-07!2 | |ontology_enrichment_celltype=CL:0002057!3.16e-25!42;CL:0000766!4.54e-24!76;CL:0000860!3.81e-23!45;CL:0000738!4.94e-22!140;CL:0002194!9.25e-18!63;CL:0000576!9.25e-18!63;CL:0000040!9.25e-18!63;CL:0000559!9.25e-18!63;CL:0002009!4.96e-17!65;CL:0000037!4.98e-17!172;CL:0000566!4.98e-17!172;CL:0000763!3.35e-16!112;CL:0000049!3.35e-16!112;CL:0000988!1.63e-15!182;CL:0000839!2.17e-15!70;CL:0000557!4.32e-15!71;CL:0002032!6.86e-15!165;CL:0000837!6.86e-15!165;CL:0002087!1.63e-14!119;CL:0000094!2.99e-13!8;CL:0002031!1.47e-12!124;CL:0000775!4.45e-10!3;CL:0000081!2.11e-09!11;CL:0000784!4.47e-09!3;CL:0000771!3.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.61e-27;8!CL:0000775;3.12e-27;3!CL:0000081;5.28e-20;11!CL:0000771;1.31e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.66e-27,8;CL:0000775,3.26e-27,3;CL:0000081,5.39e-20,11;CL:0000771,1.31e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.60e-30!102;UBERON:0003061!2.60e-30!102;UBERON:0002193!2.83e-28!112;UBERON:0000178!1.52e-18!15;UBERON:0000179!1.52e-18!15;UBERON:0000463!1.52e-18!15;UBERON:0002371!9.83e-13!80;UBERON:0002405!1.60e-12!115;UBERON:0001474!1.92e-11!86;UBERON:0003081!3.66e-09!216;UBERON:0004765!6.57e-09!101;UBERON:0001434!6.57e-09!101;UBERON:0004177!1.04e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!2.60e-30!102;UBERON:0003061!2.60e-30!102;UBERON:0002193!2.83e-28!112;UBERON:0000178!1.52e-18!15;UBERON:0000179!1.52e-18!15;UBERON:0000463!1.52e-18!15;UBERON:0002371!9.83e-13!80;UBERON:0002405!1.60e-12!115;UBERON:0001474!1.92e-11!86;UBERON:0003081!3.66e-09!216;UBERON:0004765!6.57e-09!101;UBERON:0001434!6.57e-09!101;UBERON:0004177!1.04e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.56e-46;15!UBERON:0000179;1.56e-46;15!UBERON:0000463;1.56e-46;15!UBERON:0002390;2.14e-19;32!UBERON:0002193;8.30e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.60e-46,15;UBERON:0000179,1.60e-46,15;UBERON:0000463,1.60e-46,15;UBERON:0002390,9.64e-11,98;UBERON:0003061,9.64e-11,98;UBERON:0002193,1.42e-09,108 | |||
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| ||
|short_description=p4@CCR3 | |short_description=p4@CCR3 | ||
}} | }} |
Latest revision as of 10:31, 18 September 2015
Short description: | p4@CCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCR3_5end |
Coexpression cluster: | C1311_Neutrophils_Whole_Eosinophils_Basophils_blood_CD4_CD14 |
Association with transcript: | -17bp_to_ENST00000541018, ENST00000545097, NM_001164680, NM_001837, NM_178328, NM_178329_5end |
EntrezGene: | CCR3 |
HGNC: | 1604 |
UniProt: | F5GWL6Q8TDP4P51677Q8TDP5Q8TDP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.66e-27 | 8 |
neutrophil | 3.26e-27 | 3 |
blood cell | 5.39e-20 | 11 |
eosinophil | 1.31e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.60e-46 | 15 |
haemolymphatic fluid | 1.60e-46 | 15 |
organism substance | 1.60e-46 | 15 |
hematopoietic system | 9.64e-11 | 98 |
blood island | 9.64e-11 | 98 |
hemolymphoid system | 1.42e-09 | 108 |