FFCP PHASE1:Hg19::chr3:33758833..33758853,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:33758833..33758853,+ | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr3:33758833..33758853,+ | |description=CAGE_peak_at_chr3:33758833..33758853,+ | ||
|id=chr3:33758833..33758853,+ | |id=chr3:33758833..33758853,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-32!140;CL:0002031!3.45e-28!124;CL:0000037!1.05e-27!172;CL:0000566!1.05e-27!172;CL:0002087!1.28e-26!119;CL:0000988!3.51e-25!182;CL:0002032!9.35e-25!165;CL:0000837!9.35e-25!165;CL:0002057!5.40e-23!42;CL:0000860!6.25e-21!45;CL:0000557!3.70e-19!71;CL:0000766!1.13e-18!76;CL:0002393!2.22e-17!9;CL:0002397!2.22e-17!9;CL:0002009!5.43e-17!65;CL:0000839!1.81e-16!70;CL:0000763!3.64e-15!112;CL:0000049!3.64e-15!112;CL:0002194!1.00e-14!63;CL:0000576!1.00e-14!63;CL:0000040!1.00e-14!63;CL:0000559!1.00e-14!63;CL:0000624!5.87e-12!6;CL:0000838!1.27e-09!52;CL:0000542!2.43e-09!53;CL:0000051!2.43e-09!53;CL:0000791!3.88e-09!18;CL:0000789!3.88e-09!18;CL:0002420!3.88e-09!18;CL:0002419!3.88e-09!18;CL:0000790!3.88e-09!18;CL:0000084!1.22e-08!25;CL:0000827!1.22e-08!25;CL:0000134!2.37e-07!358;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0000767!3.30e-07!3;CL:0002320!6.56e-07!365;CL:0000898!9.12e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.36e-32!140;CL:0002031!3.45e-28!124;CL:0000037!1.05e-27!172;CL:0000566!1.05e-27!172;CL:0002087!1.28e-26!119;CL:0000988!3.51e-25!182;CL:0002032!9.35e-25!165;CL:0000837!9.35e-25!165;CL:0002057!5.40e-23!42;CL:0000860!6.25e-21!45;CL:0000557!3.70e-19!71;CL:0000766!1.13e-18!76;CL:0002393!2.22e-17!9;CL:0002397!2.22e-17!9;CL:0002009!5.43e-17!65;CL:0000839!1.81e-16!70;CL:0000763!3.64e-15!112;CL:0000049!3.64e-15!112;CL:0002194!1.00e-14!63;CL:0000576!1.00e-14!63;CL:0000040!1.00e-14!63;CL:0000559!1.00e-14!63;CL:0000624!5.87e-12!6;CL:0000838!1.27e-09!52;CL:0000542!2.43e-09!53;CL:0000051!2.43e-09!53;CL:0000791!3.88e-09!18;CL:0000789!3.88e-09!18;CL:0002420!3.88e-09!18;CL:0002419!3.88e-09!18;CL:0000790!3.88e-09!18;CL:0000084!1.22e-08!25;CL:0000827!1.22e-08!25;CL:0000134!2.37e-07!358;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0000767!3.30e-07!3;CL:0002320!6.56e-07!365;CL:0000898!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.12e-25;6!CL:0002397;1.12e-25;6!CL:0000624;2.91e-17;6!CL:0000623;4.00e-14;3!CL:0000767;7.20e-14;3!CL:0000791;9.00e-14;18!CL:0000789;9.00e-14;18!CL:0002419;9.00e-14;18!CL:0000084;5.33e-12;25!CL:0001014;2.99e-10;2!CL:0001016;2.99e-10;2!CL:0000542;1.37e-08;53!CL:0000097;3.04e-08;5!CL:0000766;1.21e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.80e-29,9;CL:0002397,2.80e-29,9;CL:0000738,3.54e-28,136;CL:0002031,1.74e-24,120;CL:0000037,6.54e-23,168;CL:0000988,2.38e-21,177;CL:0002032,4.97e-21,161;CL:0000837,4.97e-21,161;CL:0002087,2.81e-18,115;CL:0000624,2.37e-17,6;CL:0000623,3.75e-14,3;CL:0000825,3.75e-14,3;CL:0000767,6.61e-14,3;CL:0000791,7.95e-14,18;CL:0000789,7.95e-14,18;CL:0002420,7.95e-14,18;CL:0002419,7.95e-14,18;CL:0000790,7.95e-14,18;CL:0000766,8.73e-13,72;CL:0000838,8.98e-13,52;CL:0000542,1.79e-12,53;CL:0000051,1.79e-12,53;CL:0000557,2.70e-12,67;CL:0000084,4.83e-12,25;CL:0000827,4.83e-12,25;CL:0001014,2.99e-10,2;CL:0001016,2.99e-10,2;CL:0000860,6.99e-10,42;CL:0002057,6.99e-10,42;CL:0000763,1.19e-09,108;CL:0000049,1.19e-09,108;CL:0000839,3.33e-09,66;CL:0002009,8.97e-09,61;CL:0000473,2.22e-08,48;CL:0000234,2.22e-08,48;CL:0000097,2.83e-08,5;CL:0002028,2.83e-08,5;CL:0000134,1.83e-07,354;CL:0002320,3.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;9.00e-14;18!CL:0000051;1.37e-08;53!CL:0002057;2.21e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.95e-17!80;UBERON:0002390!1.28e-16!102;UBERON:0003061!1.28e-16!102;UBERON:0001474!1.73e-16!86;UBERON:0002193!3.57e-14!112;UBERON:0004765!1.30e-12!101;UBERON:0001434!1.30e-12!101;UBERON:0002405!8.29e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.40e-12,76;UBERON:0002390,5.98e-11,98;UBERON:0003061,5.98e-11,98;UBERON:0001474,8.81e-11,82;UBERON:0002405,2.19e-10,93;UBERON:0002193,1.49e-09,108;UBERON:0004765,1.68e-09,90;UBERON:0001434,3.41e-08,100;UBERON:0002384,9.03e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,2.68680578668049,5.72819656269481,0,0,0,0,0.142169232487422,1.76160263600908,12.7418943962332,7.82123345133553,14.7567392086779,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,0.622822248995575,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0.316462387440884,1.90129757680748,1.27562579979026,3.14487968262564,1.68492946719743,2.10247649978109,0.48217676009124,1.71007646244749,0.39783335439818,2.37463399894024,0,0,0,0,0,0.574752439954483,0,0,2.27685187643779,0.587237189370939,1.14681968437569,1.32171328579026,1.68152568894461,0.263384084775077,1.37696839079683,1.96505381374582,4.72883447698871,0.334372990781356,2.28145586643513,3.78758244587787,7.79306913631645,0.779873198196215,0.883817722424512,1.77227115666897,2.97884250141517,0.384273959177026,0.910415432919148,0.493313713811028,0.276350017785848,0.289803085735052,3.11401782640327,10.7016331235885,11.4989076185474,0.226618685395132,3.83220493601921,4.12352934579156,3.28925599625354,0,0,0,0.150575119077773,0,0,0,0,4.23374160771938,3.20928234940209,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,2.45003920808834,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,4.74380664690938,5.90377966886842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,6.29926896344201,16.2498410457169,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,2.68680578668049,5.72819656269481,0,0,0,0,0.142169232487422,1.76160263600908,12.7418943962332,7.82123345133553,14.7567392086779,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,0.622822248995575,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0.316462387440884,1.90129757680748,1.27562579979026,3.14487968262564,1.68492946719743,2.10247649978109,0.48217676009124,1.71007646244749,0.39783335439818,2.37463399894024,0,0,0,0,0,0.574752439954483,0,0,2.27685187643779,0.587237189370939,1.14681968437569,1.32171328579026,1.68152568894461,0.263384084775077,1.37696839079683,1.96505381374582,4.72883447698871,0.334372990781356,2.28145586643513,3.78758244587787,7.79306913631645,0.779873198196215,0.883817722424512,1.77227115666897,2.97884250141517,0.384273959177026,0.910415432919148,0.493313713811028,0.276350017785848,0.289803085735052,3.11401782640327,10.7016331235885,11.4989076185474,0.226618685395132,3.83220493601921,4.12352934579156,3.28925599625354,0,0,0,0.150575119077773,0,0,0,0,4.23374160771938,3.20928234940209,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,2.45003920808834,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,4.74380664690938,5.90377966886842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,6.29926896344201,16.2498410457169,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:33758833..33758853,+ | |short_description=p@chr3:33758833..33758853,+ | ||
}} | }} |
Latest revision as of 20:33, 29 July 2015
Short description: | p@chr3:33758833..33758853, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:33758833..33758853, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.40e-12 | 76 |
hematopoietic system | 5.98e-11 | 98 |
blood island | 5.98e-11 | 98 |
bone element | 8.81e-11 | 82 |
immune system | 2.19e-10 | 93 |
hemolymphoid system | 1.49e-09 | 108 |
skeletal element | 1.68e-09 | 90 |
skeletal system | 3.41e-08 | 100 |
connective tissue | 9.03e-07 | 371 |