FFCP PHASE1:Hg19::chr3:171489085..171489158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5337 | |EntrezGene=5337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9067 | |HGNC=9067 | ||
|TSSclassifier=strong | |||
|UniProt=C9IY79 | |UniProt=C9IY79 | ||
|association_with_transcript=0bp_to_ENST00000418087_5end | |association_with_transcript=0bp_to_ENST00000418087_5end | ||
|cluster_id=chr3:171489085..171489158,- | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_2_at_PLD1_5end | |description=CAGE_peak_2_at_PLD1_5end | ||
|id=chr3:171489085..171489158,- | |id=chr3:171489085..171489158,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.53e-26!115;UBERON:0000477!8.78e-13!286;UBERON:0000468!8.32e-12!659;UBERON:0004111!8.93e-12!241;UBERON:0000119!6.54e-10!312;UBERON:0002050!7.65e-10!605;UBERON:0005423!7.65e-10!605;UBERON:0000483!1.00e-09!309;UBERON:0000922!1.04e-09!612;UBERON:0000923!1.58e-09!604;UBERON:0005291!1.58e-09!604;UBERON:0006598!1.58e-09!604;UBERON:0002532!1.58e-09!604;UBERON:0000467!2.86e-09!625;UBERON:0000025!2.91e-09!194;UBERON:0004872!4.24e-09!84;UBERON:0000480!4.55e-09!626;UBERON:0001049!1.03e-08!57;UBERON:0005068!1.03e-08!57;UBERON:0006241!1.03e-08!57;UBERON:0007135!1.03e-08!57;UBERON:0002616!1.05e-08!59;UBERON:0001017!4.05e-08!82;UBERON:0000481!1.19e-07!347;UBERON:0000073!1.39e-07!94;UBERON:0001016!1.39e-07!94;UBERON:0005743!2.19e-07!86;UBERON:0003080!3.67e-07!42;UBERON:0000955!5.07e-07!69;UBERON:0006238!5.07e-07!69;UBERON:0002780!5.51e-07!41;UBERON:0001890!5.51e-07!41;UBERON:0006240!5.51e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.81e-09;114!UBERON:0007100;4.08e-07;25!UBERON:0004921;7.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.74e-31,114;UBERON:0004111,2.26e-10,240;UBERON:0004872,7.43e-09,83;UBERON:0000025,1.54e-08,192;UBERON:0011216,1.85e-08,223;UBERON:0001049,2.47e-08,56;UBERON:0005068,2.47e-08,56;UBERON:0006241,2.47e-08,56;UBERON:0007135,2.47e-08,56;UBERON:0000483,4.47e-08,306;UBERON:0000923,4.49e-08,560;UBERON:0010316,4.49e-08,560;UBERON:0005291,4.49e-08,560;UBERON:0006598,4.49e-08,560;UBERON:0010317,4.49e-08,560;UBERON:0002532,4.49e-08,560;UBERON:0000119,4.99e-08,309;UBERON:0002050,5.03e-08,564;UBERON:0003075,2.68e-07,82;UBERON:0007284,2.68e-07,82;UBERON:0010314,3.45e-07,132;UBERON:0005423,3.63e-07,581;UBERON:0000479,4.37e-07,773;UBERON:0000073,5.79e-07,53;UBERON:0002616,5.79e-07,53;UBERON:0001017,6.21e-07,81;UBERON:0007100,8.11e-07,27;UBERON:0000922,9.68e-07,592 | |||
|phase1_expression=2.36181893051724,2.99740733447376,4.22863212287913,0,3.5756887554183,0,0,0.631719873426831,1.82829939739887,0,0,0,0,2.97039247104112,3.97676850873499,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0,0,2.9801228241701,4.26923065139718,2.44003422072406,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,1.13477044938228,1.24564449799115,0,0,0,2.42159801053347,0.368277635987565,0.632924774881769,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,1.34140171940727,2.04580098949649,7.22878304769133,4.01070328508712,3.91085601194224,3.1811437882044,2.43317435151318,2.3633704291017,0.221729397462564,0.351339142772504,3.01251873644739,0.364295288292542,1.48313777113772,0.649094787309367,1.0447784237956,0.531831842075461,0,0,0,5.96287222100115,13.763753521698,13.1913390610886,5.08777147731609,8.80948816040802,4.67700671298115,0.835979866147242,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,3.04108842287405,9.76248230192678,13.6035339727971,0.81014194788176,4.46498641420399,4.04152870727106,1.35133776579987,0,5.69559395740877,2.5648244150257,0,0,0.436094052142534,0.993943903390637,2.78587125662075,6.09082231740807,9.75244510545967,2.4826786753885,1.68203280042692,0,0.74000264525148,3.42332138939743,0.808264032418128,1.9615428373615,3.78393569112329,2.30470369792,0,1.24864030732128,4.56377457235559,0.448346041655403,0.117434498643765,0,0,0.61246251376468,0,0.826606249406124,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,2.25357088359895,1.13432183160021,0,0.640672166455702,1.05965950579781,0.300091096084402,0.618315175430633,0,0.18611685633159,0,0,0.252433774244115,0.828449087780694,8.56724101139703,0.355009592516614,0,0,0.193260853163297,1.09098448236334,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,4.33127689001751,0,0.337169380156203,0.723033089650446,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,13.9430538304014,0.982827216677626,6.49868897349544,0,3.19769940212095,1.54411029268673,0.329250856225877,0,0.100528972411631,1.29623823221941,0,0,0,1.39116485970092,1.76113041353732,0.288732895522148,0,2.66355813128438,1.58040879591855,0.858486162094873,0,1.17002132569619,0.297262324577456,0,0,0.567100388969546,1.07470227243418,0,0.766765358330422,6.89728533054321,0,0.829312462163088,0.864719720501769,0.12624243342638,0.380987365753014,2.29193055334967,0,3.4214489204541,0.616964956219941,3.00343057843917,0.857479297891735,0.897048674762886,3.92364061949952,0.1466765716419,1.80980402060889,3.57656445851882,0,1.86156681609409,0,0,0,0,0.857867961948885,2.17048642156577,0.823240336780769,0,1.77695974371273,1.58390374586686,4.22015127883421,9.58686804460323,0.99972991182057,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.01637849688985,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0.414415513436035,10.9195427630035,1.50051156317903,0.271265023699736,0.623912584592421,0.178428988797162,0.788512075169673,0.234282829985426,2.70851489754947,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,1.37060810223918,2.40200396667599,0,0,0.106727557803444,0,0,0,2.72918588600655,1.68808170616869,0.841980283299221,2.56278298511402,0.511707249066704,1.12597744800525,0,0.154209693802656,0,0.492762936082855,1.03850885836724,0.232420756919918,2.77976734060731,1.20303882181971,1.10497186723076,0.114814448164607,0.182091168006717,0.917870904715969,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6436343161926,0.0915694648183434,0,0.574265537996172,0.650060246036521,1.6068392984416,1.7400729292582,2.46477787383431,2.6095624703442,0.275673144969061,2.79292636657511,2.17525040871343,0.852266274161009,3.91740956845644,0.826424576804891,0.192190067365106,0.510450849978337,0.50578890427775,0,0.94443704049192,0,1.23213432070436,1.59691809095107,0,1.29726953372744,6.44061990338961,6.32669227911434,6.64396791909324,0.762520775695299,0,0.855877976067841,4.13664222303718,0,1.07923474549989,0.823611089208164,0.471249609382746,0.404364963146632,7.92551605865041,0.421258456238981,0,0.487426979262569,0,3.68549760801562,1.41405431953713,0,2.75682671773062,1.99031692572366,4.82295973779139,0.578775534266688,2.62357900818653,0.811641507850816,0.6196469961995,1.69017361519345,0.573645408816206,0.196498082026242,1.78335525740625,2.12856638442359,22.5885169768501,47.4184645862259,0,0,0.673554789078584,0.670302275535787,0,13.4625635110794,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0.238231775457789,0,0,0,0,0,21.1745568157939,0.980160863924127,0,0,0,0,0,0,0.423347165447766,0,0,0.22823467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|phase1_expression=2.36181893051724,2.99740733447376,4.22863212287913,0,3.5756887554183,0,0,0.631719873426831,1.82829939739887,0,0,0,0,2.97039247104112,3.97676850873499,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0,0,2.9801228241701,4.26923065139718,2.44003422072406,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,1.13477044938228,1.24564449799115,0,0,0,2.42159801053347,0.368277635987565,0.632924774881769,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,1.34140171940727,2.04580098949649,7.22878304769133,4.01070328508712,3.91085601194224,3.1811437882044,2.43317435151318,2.3633704291017,0.221729397462564,0.351339142772504,3.01251873644739,0.364295288292542,1.48313777113772,0.649094787309367,1.0447784237956,0.531831842075461,0,0,0,5.96287222100115,13.763753521698,13.1913390610886,5.08777147731609,8.80948816040802,4.67700671298115,0.835979866147242,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,3.04108842287405,9.76248230192678,13.6035339727971,0.81014194788176,4.46498641420399,4.04152870727106,1.35133776579987,0,5.69559395740877,2.5648244150257,0,0,0.436094052142534,0.993943903390637,2.78587125662075,6.09082231740807,9.75244510545967,2.4826786753885,1.68203280042692,0,0.74000264525148,3.42332138939743,0.808264032418128,1.9615428373615,3.78393569112329,2.30470369792,0,1.24864030732128,4.56377457235559,0.448346041655403,0.117434498643765,0,0,0.61246251376468,0,0.826606249406124,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,2.25357088359895,1.13432183160021,0,0.640672166455702,1.05965950579781,0.300091096084402,0.618315175430633,0,0.18611685633159,0,0,0.252433774244115,0.828449087780694,8.56724101139703,0.355009592516614,0,0,0.193260853163297,1.09098448236334,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,4.33127689001751,0,0.337169380156203,0.723033089650446,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,13.9430538304014,0.982827216677626,6.49868897349544,0,3.19769940212095,1.54411029268673,0.329250856225877,0,0.100528972411631,1.29623823221941,0,0,0,1.39116485970092,1.76113041353732,0.288732895522148,0,2.66355813128438,1.58040879591855,0.858486162094873,0,1.17002132569619,0.297262324577456,0,0,0.567100388969546,1.07470227243418,0,0.766765358330422,6.89728533054321,0,0.829312462163088,0.864719720501769,0.12624243342638,0.380987365753014,2.29193055334967,0,3.4214489204541,0.616964956219941,3.00343057843917,0.857479297891735,0.897048674762886,3.92364061949952,0.1466765716419,1.80980402060889,3.57656445851882,0,1.86156681609409,0,0,0,0,0.857867961948885,2.17048642156577,0.823240336780769,0,1.77695974371273,1.58390374586686,4.22015127883421,9.58686804460323,0.99972991182057,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.01637849688985,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0.414415513436035,10.9195427630035,1.50051156317903,0.271265023699736,0.623912584592421,0.178428988797162,0.788512075169673,0.234282829985426,2.70851489754947,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,1.37060810223918,2.40200396667599,0,0,0.106727557803444,0,0,0,2.72918588600655,1.68808170616869,0.841980283299221,2.56278298511402,0.511707249066704,1.12597744800525,0,0.154209693802656,0,0.492762936082855,1.03850885836724,0.232420756919918,2.77976734060731,1.20303882181971,1.10497186723076,0.114814448164607,0.182091168006717,0.917870904715969,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6436343161926,0.0915694648183434,0,0.574265537996172,0.650060246036521,1.6068392984416,1.7400729292582,2.46477787383431,2.6095624703442,0.275673144969061,2.79292636657511,2.17525040871343,0.852266274161009,3.91740956845644,0.826424576804891,0.192190067365106,0.510450849978337,0.50578890427775,0,0.94443704049192,0,1.23213432070436,1.59691809095107,0,1.29726953372744,6.44061990338961,6.32669227911434,6.64396791909324,0.762520775695299,0,0.855877976067841,4.13664222303718,0,1.07923474549989,0.823611089208164,0.471249609382746,0.404364963146632,7.92551605865041,0.421258456238981,0,0.487426979262569,0,3.68549760801562,1.41405431953713,0,2.75682671773062,1.99031692572366,4.82295973779139,0.578775534266688,2.62357900818653,0.811641507850816,0.6196469961995,1.69017361519345,0.573645408816206,0.196498082026242,1.78335525740625,2.12856638442359,22.5885169768501,47.4184645862259,0,0,0.673554789078584,0.670302275535787,0,13.4625635110794,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0.238231775457789,0,0,0,0,0,21.1745568157939,0.980160863924127,0,0,0,0,0,0,0.423347165447766,0,0,0.22823467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| ||
|short_description=p2@PLD1 | |short_description=p2@PLD1 | ||
}} | }} |
Latest revision as of 17:24, 16 September 2015
Short description: | p2@PLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLD1_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000418087_5end |
EntrezGene: | PLD1 |
HGNC: | 9067 |
UniProt: | C9IY79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.74e-31 | 114 |
anatomical conduit | 2.26e-10 | 240 |
splanchnic layer of lateral plate mesoderm | 7.43e-09 | 83 |
tube | 1.54e-08 | 192 |
organ system subdivision | 1.85e-08 | 223 |
neural tube | 2.47e-08 | 56 |
neural rod | 2.47e-08 | 56 |
future spinal cord | 2.47e-08 | 56 |
neural keel | 2.47e-08 | 56 |
epithelium | 4.47e-08 | 306 |
germ layer | 4.49e-08 | 560 |
germ layer / neural crest | 4.49e-08 | 560 |
embryonic tissue | 4.49e-08 | 560 |
presumptive structure | 4.49e-08 | 560 |
germ layer / neural crest derived structure | 4.49e-08 | 560 |
epiblast (generic) | 4.49e-08 | 560 |
cell layer | 4.99e-08 | 309 |
embryonic structure | 5.03e-08 | 564 |
neural plate | 2.68e-07 | 82 |
presumptive neural plate | 2.68e-07 | 82 |
structure with developmental contribution from neural crest | 3.45e-07 | 132 |
developing anatomical structure | 3.63e-07 | 581 |
tissue | 4.37e-07 | 773 |
regional part of nervous system | 5.79e-07 | 53 |
regional part of brain | 5.79e-07 | 53 |
central nervous system | 6.21e-07 | 81 |
primary circulatory organ | 8.11e-07 | 27 |
embryo | 9.68e-07 | 592 |