FFCP PHASE1:Hg19::chr14:94849470..94849495,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:94849470..94849495,-
|short_description=p6@SERPINA1
|description=CAGE_peak_6_at_SERPINA1_5end
|association_with_transcript=82bp_to_uc001ycw.3_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_uc001ycw.3_5end | |||
|cluster_id=chr14:94849470..94849495,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_SERPINA1_5end | |||
|id=chr14:94849470..94849495,- | |||
|ontology_enrichment_celltype=CL:0002057!5.47e-41!42;CL:0000860!5.38e-37!45;CL:0000766!1.28e-35!76;CL:0002194!3.41e-34!63;CL:0000576!3.41e-34!63;CL:0000040!3.41e-34!63;CL:0000559!3.41e-34!63;CL:0002009!9.39e-34!65;CL:0000557!3.86e-29!71;CL:0000839!1.02e-28!70;CL:0000763!4.63e-21!112;CL:0000049!4.63e-21!112;CL:0000738!3.01e-17!140;CL:0002087!6.83e-16!119;CL:0002031!7.88e-13!124;CL:0000037!4.81e-12!172;CL:0000566!4.81e-12!172;CL:0002032!4.28e-11!165;CL:0000837!4.28e-11!165;CL:0000988!3.27e-10!182;CL:0002393!3.08e-09!9;CL:0002397!3.08e-09!9;CL:0000094!8.90e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-53;33!CL:0002057;1.19e-53;33!CL:0000473;4.43e-44;39!CL:0000234;4.43e-44;39!CL:0000576;6.16e-44;48!CL:0000766;2.16e-31;69!CL:0000763;3.50e-13;100!CL:0000094;1.49e-11;8!CL:0002393;1.25e-10;6!CL:0002397;1.25e-10;6!CL:0002087;2.75e-10;104!CL:0000738;9.08e-09;136!CL:0000182;4.10e-08;12!CL:0000081;4.74e-08;11!CL:0000775;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.00e-73,42;CL:0002057,1.00e-73,42;CL:0000473,4.72e-72,48;CL:0000234,4.72e-72,48;CL:0000766,2.13e-64,72;CL:0002194,1.10e-59,59;CL:0000576,1.10e-59,59;CL:0000040,1.10e-59,59;CL:0000559,1.10e-59,59;CL:0002009,2.83e-57,61;CL:0000839,7.03e-52,66;CL:0000557,6.76e-51,67;CL:0000763,1.32e-37,108;CL:0000049,1.32e-37,108;CL:0000738,1.35e-30,136;CL:0002087,6.69e-28,115;CL:0002031,1.26e-23,120;CL:0000037,1.10e-21,168;CL:0002032,3.22e-21,161;CL:0000837,3.22e-21,161;CL:0000988,8.89e-20,177;CL:0002393,1.54e-15,9;CL:0002397,1.54e-15,9;CL:0000094,1.61e-11,8;CL:0000182,4.04e-08,12;CL:0000134,4.81e-08,354;CL:0000081,5.02e-08,11;CL:0002320,1.40e-07,361;CL:0000775,1.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-52;42!CL:0000049;1.15e-12;108!UBERON:0004161;1.10e-08;11!UBERON:0009497;3.85e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.51e-28!102;UBERON:0003061!3.51e-28!102;UBERON:0002405!2.76e-26!115;UBERON:0002193!2.53e-25!112;UBERON:0002371!1.39e-23!80;UBERON:0001474!1.42e-20!86;UBERON:0004765!6.70e-17!101;UBERON:0001434!6.70e-17!101;UBERON:0007023!4.88e-12!115;UBERON:0009497!2.26e-08!25;UBERON:0000015!2.26e-08!25;UBERON:0002423!2.26e-08!25;UBERON:0006235!2.26e-08!25;UBERON:0004161!2.26e-08!25;UBERON:0000062!3.95e-08!511;UBERON:0009854!2.68e-07!23;UBERON:0003081!4.98e-07!216;UBERON:0008835!6.62e-07!22;UBERON:0003894!6.62e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.34e-09;19!UBERON:0006925;2.34e-09;19!UBERON:0002423;2.56e-09;25!UBERON:0000178;1.25e-07;15!UBERON:0000179;1.25e-07;15!UBERON:0000463;1.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.76e-49,98;UBERON:0003061,3.76e-49,98;UBERON:0002193,8.79e-45,108;UBERON:0002371,3.28e-43,76;UBERON:0001474,5.03e-39,82;UBERON:0002405,1.46e-37,93;UBERON:0004765,2.58e-34,90;UBERON:0001434,1.70e-29,100;UBERON:0003081,8.43e-18,203;UBERON:0002204,5.41e-14,167;UBERON:0002107,2.42e-09,19;UBERON:0006925,2.42e-09,19;UBERON:0008836,2.42e-09,19;UBERON:0009497,2.56e-09,25;UBERON:0000015,2.56e-09,25;UBERON:0002423,2.56e-09,25;UBERON:0006235,2.56e-09,25;UBERON:0004161,2.56e-09,25;UBERON:0008835,3.08e-09,22;UBERON:0003894,3.08e-09,22;UBERON:0009854,1.02e-08,23;UBERON:0000926,4.95e-08,315;UBERON:0004120,4.95e-08,315;UBERON:0006603,4.95e-08,315;UBERON:0007499,8.34e-08,25;UBERON:0000178,1.13e-07,15;UBERON:0000179,1.13e-07,15;UBERON:0000463,1.13e-07,15;UBERON:0009856,2.10e-07,26;UBERON:0002384,5.86e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,3.0706351847777,2.01260960310899,0.919421224478927,0,0,0,0,0,1.66198622559563,6.81851121398482,3.90619567288533,1.56740831967947,0.32389366601898,1.03030227053675,11.341062624806,12.0920301980419,9.94594650870046,18.1294648786434,13.1573724166984,11.7688420940139,14.3846196161075,15.369642391746,13.2430048737608,11.721353145045,10.973239620925,6.77132432971709,14.6829024843232,13.9182136529501,9.66310983113864,22.3441241430759,6.73950956859797,15.344091019177,16.1627137091491,12.5662104301628,11.5080682643827,25.5384129993154,17.5889419654253,15.5705562248894,12.0599359323237,18.7733850631273,9.33912032232002,23.6105806027014,11.0483290796269,18.6712808590122,14.576614755524,11.9058407980424,4.61249020118427,6.73971786878971,5.85689882081875,9.32208402843065,6.27028036230747,13.1285006951399,9.49853599576097,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,3.1811437882044,4.86634870302636,0,0.221729397462564,0.087834785693126,2.68507104770311,0,0,0,0.174129737299267,0.930705723632056,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.2347220339942,0,545.046649733873,1147.94218907947,999.616522104936,0,10.9459710303371,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.936017060556951,3.56714789492948,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0,0,26.2152458381514,38.8909896965232,19.0631136180576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,8.41285383192606,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,4.23008073570678,0.200506470303285,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,132.304658955675,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,137.261661532544,0,0,0,0,0,0.764637207142375,5.12682468456746,2.1440859791201,2.46817363851717,1.94541993357815,1.62009431171434,7.13812658664843,0,0,0,0,0,0,0,0.399158742865633,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,12.5250944412337,0,0,0.276283915531148,0.503865495708552,0,0,0,0.359473404589307,0,0,0,2.3948309234694,0,14.5399911914283,0.185536196323703,1.99613798001194,0,0,5.07499702804355,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,5.06395354867265,0,0.848118428603645,0,0.995261931078505,3.09601475761687,1.83309043480088,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,1.97292201424695,4.83962864194656,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,3.31980669659857,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0.320635281006135,7.68430781061669,0,0,0,19.21863976054,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0.858452096273142,0.446342914883745,0,0,3.49487848582361,33.5616356628773,44.4221476674487,35.2520534357387,0.984274815147488,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0,0,0,14.2638330211549,0.419636705079985,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,870.813372515166,789.741057916839,0.129282956361551,0,0.171086837884329,0,6.40724475406168,0.314408610199332,14.912605992499,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.161475645631851,0,0,0,2.20114318226015,0,0,0,0,0.300841313397029,0,3.12605604493237,0,0.163771917510097,2.66140955190681,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.203909198930495,0,0.472775363535873,0,0.39246546425257,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,5.08064460229115,1.3746412112643,0,0,0,0.098150233615243,0,0,0.513314034281235,0,0.971421986118279,0,0,0,0,0,0,12.502213613487,22.0745156108997,0.470317296361523,0,0,0.9815423355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| ||
|short_description=p6@SERPINA1 | |||
}} | }} |
Latest revision as of 18:07, 16 September 2015
Short description: | p6@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 82bp_to_uc001ycw.3_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.00e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-73 | 42 |
defensive cell | 4.72e-72 | 48 |
phagocyte | 4.72e-72 | 48 |
myeloid leukocyte | 2.13e-64 | 72 |
monopoietic cell | 1.10e-59 | 59 |
monocyte | 1.10e-59 | 59 |
monoblast | 1.10e-59 | 59 |
promonocyte | 1.10e-59 | 59 |
macrophage dendritic cell progenitor | 2.83e-57 | 61 |
myeloid lineage restricted progenitor cell | 7.03e-52 | 66 |
granulocyte monocyte progenitor cell | 6.76e-51 | 67 |
myeloid cell | 1.32e-37 | 108 |
common myeloid progenitor | 1.32e-37 | 108 |
leukocyte | 1.35e-30 | 136 |
nongranular leukocyte | 6.69e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-23 | 120 |
hematopoietic stem cell | 1.10e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.22e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.22e-21 | 161 |
hematopoietic cell | 8.89e-20 | 177 |
intermediate monocyte | 1.54e-15 | 9 |
CD14-positive, CD16-positive monocyte | 1.54e-15 | 9 |
granulocyte | 1.61e-11 | 8 |
hepatocyte | 4.04e-08 | 12 |
mesenchymal cell | 4.81e-08 | 354 |
blood cell | 5.02e-08 | 11 |
connective tissue cell | 1.40e-07 | 361 |
neutrophil | 1.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.76e-49 | 98 |
blood island | 3.76e-49 | 98 |
hemolymphoid system | 8.79e-45 | 108 |
bone marrow | 3.28e-43 | 76 |
bone element | 5.03e-39 | 82 |
immune system | 1.46e-37 | 93 |
skeletal element | 2.58e-34 | 90 |
skeletal system | 1.70e-29 | 100 |
lateral plate mesoderm | 8.43e-18 | 203 |
musculoskeletal system | 5.41e-14 | 167 |
liver | 2.42e-09 | 19 |
digestive gland | 2.42e-09 | 19 |
liver bud | 2.42e-09 | 19 |
epithelium of foregut-midgut junction | 2.56e-09 | 25 |
anatomical boundary | 2.56e-09 | 25 |
hepatobiliary system | 2.56e-09 | 25 |
foregut-midgut junction | 2.56e-09 | 25 |
septum transversum | 2.56e-09 | 25 |
hepatic diverticulum | 3.08e-09 | 22 |
liver primordium | 3.08e-09 | 22 |
digestive tract diverticulum | 1.02e-08 | 23 |
mesoderm | 4.95e-08 | 315 |
mesoderm-derived structure | 4.95e-08 | 315 |
presumptive mesoderm | 4.95e-08 | 315 |
epithelial sac | 8.34e-08 | 25 |
blood | 1.13e-07 | 15 |
haemolymphatic fluid | 1.13e-07 | 15 |
organism substance | 1.13e-07 | 15 |
sac | 2.10e-07 | 26 |
connective tissue | 5.86e-07 | 371 |