FFCP PHASE1:Hg19::chr14:91976794..91976871,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:91976794..91976871,-
|short_description=p2@SMEK1
|description=CAGE_peak_2_at_SMEK1_5end
|association_with_transcript=0bp_to_ENST00000554390,ENST0000055546...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55671 | |EntrezGene=55671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20219 | |HGNC=20219 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5Z3 | |UniProt=G3V5Z3 | ||
|association_with_transcript=0bp_to_ENST00000554390,ENST00000555462,uc001xzn.2,uc001xzo.2,uc010atz.2_5end | |||
|cluster_id=chr14:91976794..91976871,- | |||
|description=CAGE_peak_2_at_SMEK1_5end | |||
|id=chr14:91976794..91976871,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-46!172;CL:0000566!1.06e-46!172;CL:0000738!1.10e-46!140;CL:0002032!5.36e-45!165;CL:0000837!5.36e-45!165;CL:0000988!7.07e-42!182;CL:0002031!3.94e-40!124;CL:0002087!4.51e-40!119;CL:0000763!4.74e-26!112;CL:0000049!4.74e-26!112;CL:0000766!3.15e-25!76;CL:0002057!1.35e-23!42;CL:0000860!2.11e-23!45;CL:0000557!4.08e-22!71;CL:0002009!3.11e-21!65;CL:0000839!7.32e-21!70;CL:0002194!1.86e-20!63;CL:0000576!1.86e-20!63;CL:0000040!1.86e-20!63;CL:0000559!1.86e-20!63;CL:0000838!1.23e-17!52;CL:0000542!4.18e-17!53;CL:0000051!4.18e-17!53;CL:0000791!1.36e-10!18;CL:0000789!1.36e-10!18;CL:0002420!1.36e-10!18;CL:0002419!1.36e-10!18;CL:0000790!1.36e-10!18;CL:0000084!4.68e-09!25;CL:0000827!4.68e-09!25;CL:0000945!3.07e-08!24;CL:0000826!3.07e-08!24;CL:0000236!5.25e-07!14;CL:0000625!5.72e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-18;33!CL:0002057;5.66e-18;33!CL:0000576;6.22e-16;48!CL:0000473;1.64e-14;39!CL:0000234;1.64e-14;39!CL:0002087;7.99e-13;104!CL:0000766;1.62e-12;69!CL:0000542;1.27e-10;53!CL:0000791;1.43e-10;18!CL:0000789;1.43e-10;18!CL:0002419;1.43e-10;18!CL:0000738;2.34e-10;136!CL:0000084;4.28e-09;25!CL:0000763;4.30e-09;100!CL:0000988;3.19e-08;177!CL:0000945;3.46e-08;24!CL:0000236;4.60e-07;13!CL:0000625;5.81e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-47,136;CL:0000037,3.14e-47,168;CL:0002032,1.54e-45,161;CL:0000837,1.54e-45,161;CL:0000988,3.97e-43,177;CL:0002031,6.84e-41,120;CL:0002087,6.99e-41,115;CL:0000763,1.46e-26,108;CL:0000049,1.46e-26,108;CL:0000766,4.28e-26,72;CL:0000860,1.35e-23,42;CL:0002057,1.35e-23,42;CL:0000557,6.39e-23,67;CL:0000473,1.10e-22,48;CL:0000234,1.10e-22,48;CL:0002009,4.27e-22,61;CL:0000839,1.27e-21,66;CL:0002194,2.58e-21,59;CL:0000576,2.58e-21,59;CL:0000040,2.58e-21,59;CL:0000559,2.58e-21,59;CL:0000838,1.23e-17,52;CL:0000542,4.18e-17,53;CL:0000051,4.18e-17,53;CL:0000791,1.36e-10,18;CL:0000789,1.36e-10,18;CL:0002420,1.36e-10,18;CL:0002419,1.36e-10,18;CL:0000790,1.36e-10,18;CL:0000084,4.68e-09,25;CL:0000827,4.68e-09,25;CL:0000945,3.07e-08,24;CL:0000826,3.07e-08,24;CL:0000236,5.25e-07,14;CL:0000625,5.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-17;42!CL:0000051;1.27e-10;53!CL:0000790;1.43e-10;18!CL:0000049;1.11e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-24!102;UBERON:0003061!1.12e-24!102;UBERON:0002193!1.23e-22!112;UBERON:0002371!1.15e-16!80;UBERON:0001474!1.39e-16!86;UBERON:0002405!2.46e-12!115;UBERON:0004765!1.01e-11!101;UBERON:0001434!1.01e-11!101;UBERON:0007023!6.84e-10!115;UBERON:0000178!2.52e-07!15;UBERON:0000179!2.52e-07!15;UBERON:0000463!2.52e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-07;15!UBERON:0000179;2.90e-07;15!UBERON:0000463;2.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-25,98;UBERON:0003061,3.16e-25,98;UBERON:0002193,4.65e-23,108;UBERON:0002405,2.91e-17,93;UBERON:0002371,3.93e-17,76;UBERON:0001474,5.34e-17,82;UBERON:0004765,1.97e-13,90;UBERON:0001434,7.33e-11,100;UBERON:0007023,1.10e-09,114;UBERON:0000178,2.52e-07,15;UBERON:0000179,2.52e-07,15;UBERON:0000463,2.52e-07,15 | |||
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| ||
|short_description=p2@SMEK1 | |||
}} | }} |
Latest revision as of 13:38, 16 September 2015
Short description: | p2@SMEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554390, ENST00000555462, uc001xzn.2, uc001xzo.2, uc010atz.2_5end |
EntrezGene: | SMEK1 |
HGNC: | 20219 |
UniProt: | G3V5Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-25 | 98 |
blood island | 3.16e-25 | 98 |
hemolymphoid system | 4.65e-23 | 108 |
immune system | 2.91e-17 | 93 |
bone marrow | 3.93e-17 | 76 |
bone element | 5.34e-17 | 82 |
skeletal element | 1.97e-13 | 90 |
skeletal system | 7.33e-11 | 100 |
adult organism | 1.10e-09 | 114 |
blood | 2.52e-07 | 15 |
haemolymphatic fluid | 2.52e-07 | 15 |
organism substance | 2.52e-07 | 15 |