FFCP PHASE1:Hg19::chr3:13859846..13859848,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:13859846..13859848,- | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_at_chr3:13859846..13859848,- | |description=CAGE_peak_at_chr3:13859846..13859848,- | ||
|id=chr3:13859846..13859848,- | |id=chr3:13859846..13859848,- | ||
|ontology_enrichment_celltype=CL:0002076!1.09e-10!43;CL:0002159!1.33e-10!13;CL:0000066!3.01e-09!254;CL:0002368!2.28e-08!13;CL:0000223!2.72e-08!59;CL:0000791!8.20e-08!18;CL:0000789!8.20e-08!18;CL:0002420!8.20e-08!18;CL:0002419!8.20e-08!18;CL:0000790!8.20e-08!18;CL:0000625!7.28e-07!11 | |ontology_enrichment_celltype=CL:0002076!1.09e-10!43;CL:0002159!1.33e-10!13;CL:0000066!3.01e-09!254;CL:0002368!2.28e-08!13;CL:0000223!2.72e-08!59;CL:0000791!8.20e-08!18;CL:0000789!8.20e-08!18;CL:0002420!8.20e-08!18;CL:0002419!8.20e-08!18;CL:0000790!8.20e-08!18;CL:0000625!7.28e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.25e-12;14!CL:0002368;8.27e-11;13!CL:0002076;9.30e-10;42!CL:0000244;4.91e-08;4!CL:0000731;4.91e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.27e-13,42;CL:0002159,2.54e-12,14;CL:0000066,8.16e-12,253;CL:0002368,9.45e-11,13;CL:0000223,1.03e-08,58;CL:0000244,4.93e-08,4;CL:0000731,4.93e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.21e-09!14 | |ontology_enrichment_disease=DOID:1749!6.21e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.90e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.20e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000956!4.18e-10!25;UBERON:0000203!4.18e-10!25;UBERON:0001869!4.65e-10!32;UBERON:0001893!6.30e-10!34;UBERON:0002619!7.14e-10!22;UBERON:0002791!2.04e-09!33;UBERON:0001049!2.56e-09!57;UBERON:0005068!2.56e-09!57;UBERON:0006241!2.56e-09!57;UBERON:0007135!2.56e-09!57;UBERON:0001950!4.34e-09!20;UBERON:0002020!6.61e-09!34;UBERON:0003528!6.61e-09!34;UBERON:0002780!1.32e-08!41;UBERON:0001890!1.32e-08!41;UBERON:0006240!1.32e-08!41;UBERON:0003080!3.21e-08!42;UBERON:0000924!5.35e-08!173;UBERON:0006601!5.35e-08!173;UBERON:0000064!5.79e-08!219;UBERON:0001017!7.38e-08!82;UBERON:0004121!7.45e-08!169;UBERON:0002616!3.05e-07!59;UBERON:0005743!5.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.21e-09;5!UBERON:0000486;3.52e-08;12!UBERON:0005910;1.49e-07;6!UBERON:0005631;3.16e-07;10!UBERON:0000158;3.16e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.28e-09,5;UBERON:0005910,1.51e-07,6;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,4.88460817580699,0.218441372130172,2.90143676051299,0,0,0,0,0,0,0.861847406537515,0,0.313454721478088,1.14494394852423,0.410623275218653,0,0,0,0,0,0.383829398097213,0.309632246632152,10.1136334692682,19.5783847205863,5.9160641626686,0,0.142169232487422,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,2.360517241366,0.393010762749165,16.0369169219617,0,0.32592226663359,0,3.89653456815823,0,0,0,0,0,0,0,0.552700035571697,0,0.296573126324121,0.267540828089713,7.31748666634838,0,0,0,5.06039384039006,5.09704662918555,3.25541726928209,0.950452044448374,0.903450714466637,1.4078527226986,6.24653632761729,2.60454977248419,0.821127996921047,1.20964045934839,0,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,28.7793277751108,18.168437696437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7106485490886,51.8217629122586,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,1.53650399572076,5.62008766288098,18.6983888685633,6.94413338688972,0,0,0,1.73895607462615,0,0,0,0,0,0,0,0,0,8.43604505880993,23.1815336914426,17.4383369608135,0.985143749731331,11.3347236020445,1.91691339582606,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.77327684181734,0.431255149719035,3.33691894327346,0,1.30139853857622,8.50617694055465,3.18280904135263,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,1.6541442089831,0,0.533637789017222,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,1.56537681191024,0,0,0,10.8287907097779,5.69913494572669,1.56869953835371,0,1.79437769117889,0,0,0,0,0,0.501689773854853,38.2314409567557,61.4996246607256,0.223874754722178,0,0,0,0,0,4.01859945426117,0,0,10.3367796839311,8.45078319847478,0,0,0,0,0,0,0,0,0,12.3963686520734,4.80475168412765,2.04180339991335,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,18.6670898687493,5.3624182042863,13.0669181833587,3.85989583184795,38.3149781677395,43.8025836735826,31.483540901104,30.5532122275256,0.507447609232169,2.29391162142713,1.13929437434833,0.952927101831156,0.411362273086194,0.648473311192717,2.16012574895246,3.17250070517708,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1759687216222,2.67268212749375,5.83605333988541,0,0.562677665642051,0,0,0,0,0,0,0,0,0,3.23526064130377,0.179021174675609,0,0,2.3948309234694,0,0,1.11321717794222,7.98455192004777,0,0,0,6.03105275913148,0,0,0.689486746482929,0,0,0,0,0,0,0.591095237907095,4.16832254592548,0,3.76444109552229,0.0769502585037971,0.227884111694002,11.2976313150149,9.06552208538699,51.7161490348758,14.9930545074002,11.6328943620365,38.3785038733417,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0.843992258112108,76.229721410322,0,0,0,0,0,0.296521128680622,0,0,0.471807930864739,0,3.74823113160543,0,0.391329237864179,0,0,1.20990716048664,7.65181904076225,0,0,0,1.32930774541437,0,0,2.38944859545918,0,0,1.73559738335131,0.0979923974143777,4.44001953560053,0,0,0,0,0,0,0,0.451961481561065,0,0,2.40581024632339,3.91102765469606,0.0801588202515337,2.13452994739353,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,4.79229601197579,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,2.00473536971481,0.670869375198532,0,0.0524545881349981,0,0,16.1208765748334,0,0,0,0,0,0,0,0.738832686744051,0,0.113312091520126,0,2.65013777824443,0.387848869084652,0,0,1.40963004463334,1.60181118851542,0.471612915298998,2.48543433208317,1.9846640872478,0,0,3.83004754662109,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.807253238237985,0,0.249960815924213,0,0,1.88212655758537,0.936669811613763,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,1.94358060540469,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,12.0447910314417,0,0,0,0,0,5.87493932421667,1.24415452006595,0,0,0,0,0,0.850299680406731,0.123935764259002,0,0,0,0,0,0,1.34881372702565,0,0.319267718114302,0.205116364240755,14.3680866846379,2.14387482639075,1.29180516505481,0,0.0981477185010256,0.825788063434183,7.70400113791052,1.03973099535304,0,0.690359926060101,0,0,0,0,1.57144016688853,0.818859587550484,0,1.41828927698629,0.781078098613847,0.413373593002368,1.45856363445986,15.3152946525101,0.548257766857182,0,0,12.7762427639595,0,0,0,0,1.33053555243958,0,0,0.203909198930495,2.76245648963966,0,5.67280149649553,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2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| ||
|short_description=p@chr3:13859846..13859848,- | |short_description=p@chr3:13859846..13859848,- | ||
}} | }} |
Latest revision as of 16:17, 29 July 2015
Short description: | p@chr3:13859846..13859848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13859846..13859848, - |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.27e-13 | 42 |
general ecto-epithelial cell | 2.54e-12 | 14 |
epithelial cell | 8.16e-12 | 253 |
respiratory epithelial cell | 9.45e-11 | 13 |
endodermal cell | 1.03e-08 | 58 |
transitional epithelial cell | 4.93e-08 | 4 |
urothelial cell | 4.93e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.28e-09 | 5 |
transitional epithelium | 1.51e-07 | 6 |
extraembryonic membrane | 1.80e-07 | 14 |
membranous layer | 1.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.20e-07 | 14 |