FFCP PHASE1:Hg19::chrX:72434628..72434722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4674 | |EntrezGene=4674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7638 | |HGNC=7638 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW6,B4E161 | |UniProt=Q9ULW6,B4E161 | ||
|association_with_transcript=0bp_to_ENST00000373517,ENST00000536638,NM_021963,uc004ebi.2,uc011mqj.1_5end | |association_with_transcript=0bp_to_ENST00000373517,ENST00000536638,NM_021963,uc004ebi.2,uc011mqj.1_5end | ||
|cluster_id=chrX:72434628..72434722,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NAP1L2_5end | |description=CAGE_peak_1_at_NAP1L2_5end | ||
|id=chrX:72434628..72434722,- | |id=chrX:72434628..72434722,- | ||
|ontology_enrichment_celltype=CL:0000791!1.42e-07!18;CL:0000789!1.42e-07!18;CL:0002420!1.42e-07!18;CL:0002419!1.42e-07!18;CL:0000790!1.42e-07!18;CL:0000084!3.18e-07!25;CL:0000827!3.18e-07!25 | |ontology_enrichment_celltype=CL:0000791!1.42e-07!18;CL:0000789!1.42e-07!18;CL:0002420!1.42e-07!18;CL:0002419!1.42e-07!18;CL:0000790!1.42e-07!18;CL:0000084!3.18e-07!25;CL:0000827!3.18e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.58e-09;18!CL:0000789;2.58e-09;18!CL:0002419;2.58e-09;18!CL:0000084;8.38e-09;25!CL:0000625;5.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.98e-09,18;CL:0000789,1.98e-09,18;CL:0002420,1.98e-09,18;CL:0002419,1.98e-09,18;CL:0000790,1.98e-09,18;CL:0000084,7.58e-09,25;CL:0000827,7.58e-09,25;CL:0000625,4.86e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.58e-09;18!UBERON:0006601;4.35e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.15e-51!115;UBERON:0001049!2.66e-33!57;UBERON:0005068!2.66e-33!57;UBERON:0006241!2.66e-33!57;UBERON:0007135!2.66e-33!57;UBERON:0001017!1.19e-31!82;UBERON:0005743!1.82e-30!86;UBERON:0002616!9.61e-28!59;UBERON:0003075!1.17e-27!86;UBERON:0007284!1.17e-27!86;UBERON:0000073!6.03e-27!94;UBERON:0001016!6.03e-27!94;UBERON:0003080!9.81e-27!42;UBERON:0002780!2.69e-26!41;UBERON:0001890!2.69e-26!41;UBERON:0006240!2.69e-26!41;UBERON:0002346!2.32e-25!90;UBERON:0000955!1.50e-24!69;UBERON:0006238!1.50e-24!69;UBERON:0002020!9.10e-22!34;UBERON:0003528!9.10e-22!34;UBERON:0001893!1.32e-21!34;UBERON:0002791!6.36e-21!33;UBERON:0001869!1.53e-20!32;UBERON:0003056!4.24e-20!61;UBERON:0000153!7.65e-19!129;UBERON:0007811!7.65e-19!129;UBERON:0000033!2.18e-18!123;UBERON:0004121!2.80e-17!169;UBERON:0002619!1.40e-16!22;UBERON:0000924!3.06e-16!173;UBERON:0006601!3.06e-16!173;UBERON:0000956!4.95e-16!25;UBERON:0000203!4.95e-16!25;UBERON:0001950!3.06e-15!20;UBERON:0003076!8.87e-08!15;UBERON:0003057!8.87e-08!15;UBERON:0002420!2.96e-07!9;UBERON:0007245!2.96e-07!9;UBERON:0010009!2.96e-07!9;UBERON:0010011!2.96e-07!9;UBERON:0000454!2.96e-07!9;UBERON:0002308!3.33e-07!9;UBERON:0000125!3.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.25e-23;41!UBERON:0001890;8.25e-23;41!UBERON:0003528;2.54e-22;34!UBERON:0002020;2.54e-22;34!UBERON:0001869;2.76e-22;32!UBERON:0001893;3.33e-22;34!UBERON:0002791;3.66e-22;32!UBERON:0000073;1.43e-21;53!UBERON:0002616;1.43e-21;53!UBERON:0002619;1.71e-20;22!UBERON:0000956;4.99e-19;25!UBERON:0000203;4.99e-19;25!UBERON:0001950;8.40e-19;20!UBERON:0001017;2.03e-14;75!UBERON:0007023;2.93e-14;114!UBERON:0000955;3.52e-14;68!UBERON:0001016;5.11e-13;83!UBERON:0002420;8.86e-09;9!UBERON:0007245;8.86e-09;9!UBERON:0010009;8.86e-09;9!UBERON:0010011;8.86e-09;9!UBERON:0000454;8.86e-09;9!UBERON:0000125;1.03e-08;9!UBERON:0002308;1.03e-08;9!UBERON:0004732;1.80e-07;13!UBERON:0001894;2.56e-07;7!UBERON:0009663;4.86e-07;7!UBERON:0001871;5.67e-07;6!UBERON:0000200;7.63e-07;6!UBERON:0004733;9.08e-07;12!UBERON:0002028;9.08e-07;12 | |||
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|short_description=p1@NAP1L2 | |short_description=p1@NAP1L2 | ||
}} | }} |
Latest revision as of 08:40, 16 September 2015
Short description: | p1@NAP1L2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAP1L2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373517, ENST00000536638, NM_021963, uc004ebi.2, uc011mqj.1_5end |
EntrezGene: | NAP1L2 |
HGNC: | 7638 |
UniProt: | Q9ULW6B4E161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.98e-09 | 18 |
alpha-beta T cell | 1.98e-09 | 18 |
immature T cell | 1.98e-09 | 18 |
mature T cell | 1.98e-09 | 18 |
immature alpha-beta T cell | 1.98e-09 | 18 |
T cell | 7.58e-09 | 25 |
pro-T cell | 7.58e-09 | 25 |
CD8-positive, alpha-beta T cell | 4.86e-07 | 11 |