FFCP PHASE1:Hg19::chr14:91526905..91526916,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:91526905..91526916,-
|short_description=p3@RPS6KA5
|description=CAGE_peak_3_at_RPS6KA5_5end
|association_with_transcript=12bp_to_ENST00000556594_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9252 | |EntrezGene=9252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10434 | |HGNC=10434 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4D7 | |UniProt=G3V4D7 | ||
|association_with_transcript=12bp_to_ENST00000556594_5end | |||
|cluster_id=chr14:91526905..91526916,- | |||
|coexpression_cluster_id=C2322 | |||
|description=CAGE_peak_3_at_RPS6KA5_5end | |||
|id=chr14:91526905..91526916,- | |||
|ontology_enrichment_celltype=CL:0002032!6.33e-12!165;CL:0000837!6.33e-12!165;CL:0000037!1.02e-11!172;CL:0000566!1.02e-11!172;CL:0000988!5.48e-10!182;CL:0000738!6.60e-08!140;CL:0002031!7.76e-07!124;CL:0000542!9.03e-07!53;CL:0000051!9.03e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.07e-10;5!CL:0000084;4.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.15e-10,5;CL:0002028,3.15e-10,5;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161;CL:0000037,2.26e-08,168;CL:0000988,2.25e-07,177;CL:0000838,4.51e-07,52;CL:0000084,4.88e-07,25;CL:0000827,4.88e-07,25;CL:0000542,7.58e-07,53;CL:0000051,7.58e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-16!115;UBERON:0001049!6.64e-12!57;UBERON:0005068!6.64e-12!57;UBERON:0006241!6.64e-12!57;UBERON:0007135!6.64e-12!57;UBERON:0000955!4.42e-11!69;UBERON:0006238!4.42e-11!69;UBERON:0003080!8.07e-10!42;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0001017!1.52e-09!82;UBERON:0002616!3.79e-09!59;UBERON:0001893!5.70e-09!34;UBERON:0002020!6.00e-09!34;UBERON:0003528!6.00e-09!34;UBERON:0002791!1.26e-08!33;UBERON:0005743!2.27e-08!86;UBERON:0001950!2.62e-08!20;UBERON:0001869!3.24e-08!32;UBERON:0002619!1.53e-07!22;UBERON:0000073!1.70e-07!94;UBERON:0001016!1.70e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.48e-09,56;UBERON:0005068,6.48e-09,56;UBERON:0006241,6.48e-09,56;UBERON:0007135,6.48e-09,56;UBERON:0000073,7.74e-09,53;UBERON:0002616,7.74e-09,53;UBERON:0002780,6.53e-07,41;UBERON:0001890,6.53e-07,41;UBERON:0003080,6.53e-07,41;UBERON:0006240,6.53e-07,41 | |||
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| ||
|short_description=p3@RPS6KA5 | |||
}} | }} |
Latest revision as of 12:53, 16 September 2015
Short description: | p3@RPS6KA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS6KA5_5end |
Coexpression cluster: | C2322_Mast_Neutrophils_Eosinophils_granulocyte_cerebellum_Whole_CD4 |
Association with transcript: | 12bp_to_ENST00000556594_5end |
EntrezGene: | RPS6KA5 |
HGNC: | 10434 |
UniProt: | G3V4D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.15e-10 | 5 |
basophil mast progenitor cell | 3.15e-10 | 5 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
hematopoietic stem cell | 2.26e-08 | 168 |
hematopoietic cell | 2.25e-07 | 177 |
lymphoid lineage restricted progenitor cell | 4.51e-07 | 52 |
T cell | 4.88e-07 | 25 |
pro-T cell | 4.88e-07 | 25 |
lymphocyte | 7.58e-07 | 53 |
common lymphoid progenitor | 7.58e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.48e-09 | 56 |
neural rod | 6.48e-09 | 56 |
future spinal cord | 6.48e-09 | 56 |
neural keel | 6.48e-09 | 56 |
regional part of nervous system | 7.74e-09 | 53 |
regional part of brain | 7.74e-09 | 53 |
regional part of forebrain | 6.53e-07 | 41 |
forebrain | 6.53e-07 | 41 |
anterior neural tube | 6.53e-07 | 41 |
future forebrain | 6.53e-07 | 41 |