FFCP PHASE1:Hg19::chrX:55306491..55306512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000440645_5end | |association_with_transcript=-63bp_to_ENST00000440645_5end | ||
|cluster_id=chrX:55306491..55306512,+ | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_1_at_ENST00000440645_5end | |description=CAGE_peak_1_at_ENST00000440645_5end | ||
|id=chrX:55306491..55306512,+ | |id=chrX:55306491..55306512,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.03e-09;2!CL:0000054;1.78e-09;2!CL:0000137;1.78e-09;2!CL:0000092;1.78e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.03e-09,2;CL:0000054,1.71e-09,2;CL:0000137,1.71e-09,2;CL:0000092,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.44e-07;10!UBERON:0005564;1.44e-07;10 | |||
|ontology_enrichment_disease=DOID:201!1.09e-07!6;DOID:0060100!1.09e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:201;6.34e-12;6!DOID:0060100;6.34e-12;6!DOID:4231;1.27e-09;2!DOID:1907;1.27e-09;2!DOID:200;1.78e-09;2!DOID:4305;1.78e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,5.68e-12,6;DOID:0060100,5.68e-12,6;DOID:4231,1.12e-09,2;DOID:1907,1.12e-09,2;DOID:200,1.71e-09,2;DOID:4305,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.40e-12!8;UBERON:0001282!1.45e-11!1;UBERON:0009842!1.45e-11!1;UBERON:0003704!1.45e-11!1;UBERON:0001171!1.45e-11!1;UBERON:0001172!1.45e-11!1;UBERON:0007195!1.78e-11!1;UBERON:0003135!8.20e-09!11;UBERON:0002294!9.12e-07!7;UBERON:0001173!9.12e-07!7;UBERON:0004912!9.12e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.78e-18;1!UBERON:0007195;6.78e-18;1!UBERON:0009842;6.78e-18;1!UBERON:0003704;6.78e-18;1!UBERON:0001171;6.78e-18;1!UBERON:0001172;6.78e-18;1!UBERON:0002294;1.72e-10;7!UBERON:0001173;1.72e-10;7!UBERON:0000473;3.07e-09;8!UBERON:0003135;5.89e-07;11!UBERON:0002110;6.88e-07;3!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.23e-18,1;UBERON:0009842,6.23e-18,1;UBERON:0003704,6.23e-18,1;UBERON:0001171,6.23e-18,1;UBERON:0001172,6.23e-18,1;UBERON:0007195,8.72e-18,1;UBERON:0000473,3.14e-09,8;UBERON:0002294,2.29e-08,9;UBERON:0001173,2.29e-08,9;UBERON:0004912,2.29e-08,9;UBERON:0003135,5.98e-07,11;UBERON:0002110,6.88e-07,3;UBERON:0006242,6.88e-07,3;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3 | |||
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|short_description=p1@ENST00000440645 | |short_description=p1@ENST00000440645 | ||
}} | }} |
Latest revision as of 08:57, 1 August 2015
Short description: | p1@ENST00000440645 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000440645_5end |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | -63bp_to_ENST00000440645_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.03e-09 | 2 |
bone matrix secreting cell | 1.71e-09 | 2 |
osteocyte | 1.71e-09 | 2 |
osteoclast | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.23e-18 | 1 |
acinus | 6.23e-18 | 1 |
intrahepatic bile duct | 6.23e-18 | 1 |
portal lobule | 6.23e-18 | 1 |
hepatic acinus | 6.23e-18 | 1 |
stroma of bone marrow | 8.72e-18 | 1 |
testis | 3.14e-09 | 8 |
biliary system | 2.29e-08 | 9 |
biliary tree | 2.29e-08 | 9 |
biliary bud | 2.29e-08 | 9 |
male reproductive organ | 5.98e-07 | 11 |
gallbladder | 6.88e-07 | 3 |
gall bladder primordium | 6.88e-07 | 3 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 5.68e-12 | 6 |
musculoskeletal system cancer | 5.68e-12 | 6 |
histiocytoma | 1.12e-09 | 2 |
malignant fibroxanthoma | 1.12e-09 | 2 |
giant cell tumor | 1.71e-09 | 2 |
bone giant cell tumor | 1.71e-09 | 2 |