FFCP PHASE1:Hg19::chrX:47442876..47442906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7076 | |EntrezGene=7076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11820 | |HGNC=11820 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FGX5 | |UniProt=Q6FGX5 | ||
|association_with_transcript=61bp_to_CR407638,CR541982_5end | |association_with_transcript=61bp_to_CR407638,CR541982_5end | ||
|cluster_id=chrX:47442876..47442906,+ | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_3_at_TIMP1_5end | |description=CAGE_peak_3_at_TIMP1_5end | ||
|id=chrX:47442876..47442906,+ | |id=chrX:47442876..47442906,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.02e-26!180;CL:0000048!3.18e-19!430;CL:0000723!1.34e-18!436;CL:0000680!1.08e-17!57;CL:0000056!1.08e-17!57;CL:0000355!1.08e-17!57;CL:0000187!1.47e-16!54;CL:0000034!2.17e-16!444;CL:0000057!4.14e-16!75;CL:0002371!4.20e-16!591;CL:0000183!6.58e-16!59;CL:0000192!1.57e-13!42;CL:0000514!1.57e-13!42;CL:0000144!2.43e-12!625;CL:0000393!3.94e-12!60;CL:0000211!3.94e-12!60;CL:0000359!1.89e-11!32;CL:0002320!8.79e-10!365;CL:0000222!1.38e-09!119;CL:0000134!9.88e-09!358;CL:0000548!1.08e-08!679;CL:0000004!1.08e-08!679;CL:0000255!1.08e-08!679;CL:0002494!2.47e-08!16;CL:0000012!6.12e-08!682;CL:0002334!3.10e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.02e-26!180;CL:0000048!3.18e-19!430;CL:0000723!1.34e-18!436;CL:0000680!1.08e-17!57;CL:0000056!1.08e-17!57;CL:0000355!1.08e-17!57;CL:0000187!1.47e-16!54;CL:0000034!2.17e-16!444;CL:0000057!4.14e-16!75;CL:0002371!4.20e-16!591;CL:0000183!6.58e-16!59;CL:0000192!1.57e-13!42;CL:0000514!1.57e-13!42;CL:0000144!2.43e-12!625;CL:0000393!3.94e-12!60;CL:0000211!3.94e-12!60;CL:0000359!1.89e-11!32;CL:0002320!8.79e-10!365;CL:0000222!1.38e-09!119;CL:0000134!9.88e-09!358;CL:0000548!1.08e-08!679;CL:0000004!1.08e-08!679;CL:0000255!1.08e-08!679;CL:0002494!2.47e-08!16;CL:0000012!6.12e-08!682;CL:0002334!3.10e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.16e-12;32!CL:0000192;4.56e-11;43!CL:0000187;2.91e-10;55!CL:0000134;1.22e-09;55!CL:0002494;3.56e-09;16!CL:0000723;8.31e-09;61!CL:0000048;2.52e-08;58!CL:0002334;6.03e-08;12!CL:0000393;8.07e-08;61!CL:0000211;8.07e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.38e-23,427;CL:0000723,9.87e-23,433;CL:0000034,1.29e-20,441;CL:0000680,3.63e-19,58;CL:0000056,3.63e-19,58;CL:0000355,3.63e-19,58;CL:0000187,6.71e-18,55;CL:0000057,1.32e-17,76;CL:0000192,1.73e-14,43;CL:0000514,1.73e-14,43;CL:0000393,7.44e-14,61;CL:0000211,7.44e-14,61;CL:0000359,2.69e-12,32;CL:0002320,8.29e-12,361;CL:0000134,1.44e-10,354;CL:0002494,3.68e-09,16;CL:0000222,7.31e-09,121;CL:0002334,6.27e-08,12;CL:0000219,3.37e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;4.56e-11;43!CL:0000355;3.32e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!5.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.65e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.09e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!9.72e-20!448;UBERON:0004120!9.72e-20!448;UBERON:0006603!9.72e-20!448;UBERON:0000914!1.92e-18!83;UBERON:0002329!1.92e-18!83;UBERON:0003077!1.92e-18!83;UBERON:0003059!1.92e-18!83;UBERON:0007282!1.92e-18!83;UBERON:0009618!1.92e-18!83;UBERON:0007285!1.92e-18!83;UBERON:0004290!3.87e-18!70;UBERON:0001134!1.30e-16!61;UBERON:0002036!1.30e-16!61;UBERON:0003082!1.30e-16!61;UBERON:0002204!2.00e-16!167;UBERON:0002385!5.09e-16!63;UBERON:0001015!5.09e-16!63;UBERON:0000383!5.09e-16!63;UBERON:0000486!6.86e-16!82;UBERON:0005256!4.32e-15!143;UBERON:0004872!2.84e-14!84;UBERON:0003914!5.17e-11!118;UBERON:0001637!5.38e-11!42;UBERON:0003509!5.38e-11!42;UBERON:0004572!5.38e-11!42;UBERON:0002100!6.15e-11!216;UBERON:0003081!1.80e-10!216;UBERON:0001009!5.57e-10!113;UBERON:0004573!8.76e-10!33;UBERON:0004571!8.76e-10!33;UBERON:0004535!9.37e-10!110;UBERON:0000468!1.73e-09!659;UBERON:0002384!1.81e-09!375;UBERON:0001981!2.66e-09!60;UBERON:0007500!2.66e-09!60;UBERON:0004537!2.66e-09!60;UBERON:0006965!2.66e-09!60;UBERON:0000948!2.92e-09!24;UBERON:0005498!2.92e-09!24;UBERON:0004140!2.92e-09!24;UBERON:0009881!2.92e-09!24;UBERON:0004141!2.92e-09!24;UBERON:0003084!2.92e-09!24;UBERON:0007005!2.92e-09!24;UBERON:0004139!2.92e-09!24;UBERON:0004291!2.92e-09!24;UBERON:0007100!3.43e-09!27;UBERON:0002049!3.71e-09!79;UBERON:0007798!3.71e-09!79;UBERON:0001013!1.11e-08!14;UBERON:0000490!1.37e-08!138;UBERON:0000055!2.24e-08!69;UBERON:0003104!7.18e-08!238;UBERON:0009142!7.18e-08!238;UBERON:0000480!1.89e-07!626;UBERON:0000467!1.91e-07!625;UBERON:0003102!6.62e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.15e-10;33!UBERON:0004571;7.15e-10;33!UBERON:0001013;1.33e-09;14!UBERON:0001637;8.44e-09;42!UBERON:0003509;8.44e-09;42!UBERON:0004572;8.44e-09;42!UBERON:0000948;1.38e-08;22!UBERON:0007100;1.88e-08;25!UBERON:0002385;3.69e-07;31!UBERON:0001015;3.69e-07;31!UBERON:0000383;3.69e-07;31 | |||
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| ||
|short_description=p3@TIMP1 | |short_description=p3@TIMP1 | ||
}} | }} |
Latest revision as of 06:36, 25 September 2015
Short description: | p3@TIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIMP1_5end |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | 61bp_to_CR407638, CR541982_5end |
EntrezGene: | TIMP1 |
HGNC: | 11820 |
UniProt: | Q6FGX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.38e-23 | 427 |
somatic stem cell | 9.87e-23 | 433 |
stem cell | 1.29e-20 | 441 |
muscle precursor cell | 3.63e-19 | 58 |
myoblast | 3.63e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-19 | 58 |
muscle cell | 6.71e-18 | 55 |
fibroblast | 1.32e-17 | 76 |
smooth muscle cell | 1.73e-14 | 43 |
smooth muscle myoblast | 1.73e-14 | 43 |
electrically responsive cell | 7.44e-14 | 61 |
electrically active cell | 7.44e-14 | 61 |
vascular associated smooth muscle cell | 2.69e-12 | 32 |
connective tissue cell | 8.29e-12 | 361 |
mesenchymal cell | 1.44e-10 | 354 |
cardiocyte | 3.68e-09 | 16 |
mesodermal cell | 7.31e-09 | 121 |
preadipocyte | 6.27e-08 | 12 |
motile cell | 3.37e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.09e-08 | 14 |