FFCP PHASE1:Hg19::chrX:4459300..4459310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:4459300..4459310,- | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chrX:4459300..4459310,- | |description=CAGE_peak_at_chrX:4459300..4459310,- | ||
|id=chrX:4459300..4459310,- | |id=chrX:4459300..4459310,- | ||
|ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000066!6.54e-08!254;CL:0000235!5.46e-07!10 | |ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000066!6.54e-08!254;CL:0000235!5.46e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.64e-21;5 | |||
|ontology_enrichment_disease=DOID:0050687!4.77e-17!143;DOID:3493!6.78e-16!2;DOID:305!8.94e-15!106;DOID:162!1.39e-12!235;DOID:14566!3.08e-12!239;DOID:6193!3.58e-09!1;DOID:3112!4.89e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;5.92e-26;1!DOID:6193;5.92e-26;1!DOID:3350;1.07e-13;2!DOID:3493;1.07e-13;2!DOID:299;1.35e-09;25!DOID:3119;4.82e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.58e-26,1;DOID:3112,9.79e-26,1;DOID:3350,8.28e-14,2;DOID:3493,1.21e-13,2;DOID:299,1.44e-09,25;DOID:3119,4.49e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.36e-13!9;UBERON:0007195!5.28e-09!1;UBERON:0001282!1.91e-08!1;UBERON:0009842!1.91e-08!1;UBERON:0003704!1.91e-08!1;UBERON:0001171!1.91e-08!1;UBERON:0001172!1.91e-08!1;UBERON:0002394!2.68e-08!4;UBERON:0003928!2.68e-08!4;UBERON:0002046!3.89e-07!5;UBERON:0004117!3.89e-07!5;UBERON:0007689!3.89e-07!5;UBERON:0007123!3.89e-07!5;UBERON:0003091!3.89e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.92e-26;1!UBERON:0002046;6.64e-21;5!UBERON:0001052;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.26e-25,1;UBERON:0002046,8.13e-21,5;UBERON:0004117,8.13e-21,5;UBERON:0007689,8.13e-21,5;UBERON:0007123,8.13e-21,5;UBERON:0003091,8.13e-21,5;UBERON:0009722,5.06e-10,11;UBERON:0007690,5.06e-10,11;UBERON:0001052,1.40e-07,4 | |||
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|short_description=p@chrX:4459300..4459310,- | |short_description=p@chrX:4459300..4459310,- | ||
}} | }} |
Latest revision as of 08:09, 1 August 2015
Short description: | p@chrX:4459300..4459310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:4459300..4459310, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.26e-25 | 1 |
thyroid gland | 8.13e-21 | 5 |
pharyngeal pouch | 8.13e-21 | 5 |
thyroid diverticulum | 8.13e-21 | 5 |
pharyngeal pouch 2 | 8.13e-21 | 5 |
thyroid primordium | 8.13e-21 | 5 |
entire pharyngeal arch endoderm | 5.06e-10 | 11 |
early pharyngeal endoderm | 5.06e-10 | 11 |
rectum | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.58e-26 | 1 |
papillary adenocarcinoma | 9.79e-26 | 1 |
mesenchymal cell neoplasm | 8.28e-14 | 2 |
signet ring cell adenocarcinoma | 1.21e-13 | 2 |
adenocarcinoma | 1.44e-09 | 25 |
gastrointestinal system cancer | 4.49e-08 | 14 |