FFCP PHASE1:Hg19::chr3:123419560..123419573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_BC034911_5end | |association_with_transcript=20bp_to_BC034911_5end | ||
|cluster_id=chr3:123419560..123419573,- | |||
|coexpression_cluster_id=C1918 | |||
|description=CAGE_peak_26_at_MYLK_5end | |description=CAGE_peak_26_at_MYLK_5end | ||
|id=chr3:123419560..123419573,- | |id=chr3:123419560..123419573,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.13e-14;10!UBERON:0005754;1.59e-07;1!UBERON:0004874;2.37e-07;1!UBERON:0009143;6.48e-07;1!UBERON:0006298;6.48e-07;1!UBERON:0006242;6.48e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.89e-19;3!DOID:127;7.89e-19;3!DOID:0060072;2.95e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.82e-19,3;DOID:127,6.82e-19,3;DOID:0060072,2.65e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-59!115;UBERON:0001049!1.18e-29!57;UBERON:0005068!1.18e-29!57;UBERON:0006241!1.18e-29!57;UBERON:0007135!1.18e-29!57;UBERON:0002616!3.60e-28!59;UBERON:0002020!3.77e-27!34;UBERON:0003528!3.77e-27!34;UBERON:0001893!8.01e-27!34;UBERON:0001869!9.41e-27!32;UBERON:0002780!1.11e-26!41;UBERON:0001890!1.11e-26!41;UBERON:0006240!1.11e-26!41;UBERON:0003080!7.87e-26!42;UBERON:0002791!1.61e-25!33;UBERON:0000955!2.08e-23!69;UBERON:0006238!2.08e-23!69;UBERON:0003075!3.93e-22!86;UBERON:0007284!3.93e-22!86;UBERON:0001017!9.38e-22!82;UBERON:0005743!1.23e-21!86;UBERON:0002346!1.41e-20!90;UBERON:0000073!2.04e-18!94;UBERON:0001016!2.04e-18!94;UBERON:0002619!3.09e-18!22;UBERON:0000956!1.77e-17!25;UBERON:0000203!1.77e-17!25;UBERON:0003056!1.65e-16!61;UBERON:0001950!1.42e-15!20;UBERON:0000033!2.52e-12!123;UBERON:0000153!6.24e-12!129;UBERON:0007811!6.24e-12!129;UBERON:0002308!1.41e-11!9;UBERON:0000125!1.41e-11!9;UBERON:0002420!3.73e-11!9;UBERON:0007245!3.73e-11!9;UBERON:0010009!3.73e-11!9;UBERON:0010011!3.73e-11!9;UBERON:0000454!3.73e-11!9;UBERON:0004111!5.77e-10!241;UBERON:0003133!6.90e-10!48;UBERON:0000025!1.09e-09!194;UBERON:0004121!1.65e-09!169;UBERON:0000924!5.24e-09!173;UBERON:0006601!5.24e-09!173;UBERON:0005156!8.75e-09!59;UBERON:0000990!8.75e-09!59;UBERON:0009663!1.06e-08!7;UBERON:0000349!1.72e-08!5;UBERON:0000477!1.08e-07!286;UBERON:0000062!1.43e-07!511;UBERON:0002323!1.61e-07!46;UBERON:0000064!2.03e-07!219;UBERON:0000369!2.61e-07!4;UBERON:0002435!2.61e-07!4;UBERON:0000204!2.61e-07!4;UBERON:0010082!2.61e-07!4;UBERON:0002553!2.73e-07!70;UBERON:0000475!3.79e-07!365;UBERON:0003886!5.85e-07!63;UBERON:0002298!8.90e-07!8;UBERON:0004458!9.02e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;7.01e-17;21!UBERON:0003975;3.22e-11;18!UBERON:0003133;2.45e-10;44!UBERON:0002420;3.88e-10;9!UBERON:0000125;3.88e-10;9!UBERON:0007245;3.88e-10;9!UBERON:0002308;3.88e-10;9!UBERON:0010009;3.88e-10;9!UBERON:0010011;3.88e-10;9!UBERON:0000454;3.88e-10;9!UBERON:0006947;3.91e-09;3!UBERON:0004054;3.91e-09;3!UBERON:0003134;7.57e-09;33!UBERON:0000995;1.58e-08;17!UBERON:0003528;1.82e-08;34!UBERON:0002020;1.82e-08;34!UBERON:0005383;2.11e-08;3!UBERON:0005382;2.11e-08;3!UBERON:0009663;9.74e-08;7!UBERON:0002791;1.19e-07;32!UBERON:0007023;1.20e-07;114!UBERON:0000998;1.59e-07;1!UBERON:0006868;1.59e-07;1!UBERON:0001000;1.97e-07;1!UBERON:0005352;1.97e-07;1!UBERON:0000474;2.08e-07;37!UBERON:0000989;2.37e-07;1!UBERON:0008811;2.37e-07;1!UBERON:0005795;3.10e-07;1!UBERON:0005904;4.78e-07;4!UBERON:0005156;5.76e-07;59!UBERON:0000990;5.76e-07;59!UBERON:0001874;6.48e-07;1!UBERON:0006834;6.48e-07;1!UBERON:0001736;6.48e-07;1!UBERON:0000996;6.48e-07;1!UBERON:0002146;6.48e-07;1!UBERON:0005623;6.48e-07;1!UBERON:0001869;7.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.55e-26,114;UBERON:0004175,4.59e-14,25;UBERON:0003133,8.63e-13,48;UBERON:0005156,4.97e-12,59;UBERON:0000990,4.97e-12,59;UBERON:0002420,2.10e-10,9;UBERON:0007245,2.10e-10,9;UBERON:0010009,2.10e-10,9;UBERON:0010011,2.10e-10,9;UBERON:0000454,2.10e-10,9;UBERON:0000125,2.76e-10,9;UBERON:0002308,2.76e-10,9;UBERON:0005795,3.21e-09,22;UBERON:0003528,3.59e-09,34;UBERON:0002020,3.59e-09,34;UBERON:0006947,3.69e-09,3;UBERON:0004054,3.69e-09,3;UBERON:0003975,3.95e-09,22;UBERON:0003134,6.17e-09,37;UBERON:0000474,6.17e-09,37;UBERON:0005383,1.50e-08,3;UBERON:0005382,1.50e-08,3;UBERON:0003100,6.00e-08,41;UBERON:0009663,6.67e-08,7;UBERON:0002791,1.42e-07,32;UBERON:0001869,1.42e-07,32;UBERON:0000998,1.55e-07,1;UBERON:0006868,1.55e-07,1;UBERON:0001000,1.86e-07,1;UBERON:0005352,1.86e-07,1;UBERON:0000989,2.37e-07,1;UBERON:0008811,2.37e-07,1;UBERON:0006258,2.37e-07,1;UBERON:0005876,2.37e-07,1;UBERON:0004874,2.37e-07,1;UBERON:0006834,4.06e-07,1;UBERON:0001893,4.31e-07,34;UBERON:0005904,4.58e-07,4;UBERON:0001874,5.45e-07,1;UBERON:0001736,6.12e-07,1;UBERON:0006298,6.12e-07,1;UBERON:0002146,6.49e-07,1;UBERON:0005623,6.49e-07,1;UBERON:0000995,6.63e-07,21;UBERON:0000996,6.88e-07,1 | |||
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|short_description=p26@MYLK | |short_description=p26@MYLK | ||
}} | }} |
Latest revision as of 01:31, 20 September 2015
Short description: | p26@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_MYLK_5end |
Coexpression cluster: | C1918_smooth_leiomyoma_bladder_Mesenchymal_cervix_esophagus_prostate |
Association with transcript: | 20bp_to_BC034911_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.82e-19 | 3 |
leiomyoma | 6.82e-19 | 3 |
benign neoplasm | 2.65e-14 | 4 |