FFCP PHASE1:Hg19::chrX:38186665..38186679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6103 | |EntrezGene=6103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10295 | |HGNC=10295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482855_5end | |association_with_transcript=0bp_to_ENST00000482855_5end | ||
|cluster_id=chrX:38186665..38186679,- | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_8_at_RPGR_5end | |description=CAGE_peak_8_at_RPGR_5end | ||
|id=chrX:38186665..38186679,- | |id=chrX:38186665..38186679,- | ||
|ontology_enrichment_celltype=CL:0000738!2.96e-29!140;CL:0000037!2.20e-23!172;CL:0000566!2.20e-23!172;CL:0002087!2.87e-23!119;CL:0002057!7.76e-23!42;CL:0002032!2.21e-22!165;CL:0000837!2.21e-22!165;CL:0000860!6.08e-22!45;CL:0000988!1.40e-21!182;CL:0000766!5.25e-21!76;CL:0002031!1.42e-20!124;CL:0000763!4.67e-14!112;CL:0000049!4.67e-14!112;CL:0000557!1.02e-13!71;CL:0002009!1.10e-13!65;CL:0002194!2.22e-13!63;CL:0000576!2.22e-13!63;CL:0000040!2.22e-13!63;CL:0000559!2.22e-13!63;CL:0000839!4.54e-13!70;CL:0000094!1.93e-12!8;CL:0002393!1.20e-09!9;CL:0002397!1.20e-09!9;CL:0000081!1.98e-08!11;CL:0000542!2.99e-08!53;CL:0000051!2.99e-08!53;CL:0000838!1.03e-07!52 | |ontology_enrichment_celltype=CL:0000738!2.96e-29!140;CL:0000037!2.20e-23!172;CL:0000566!2.20e-23!172;CL:0002087!2.87e-23!119;CL:0002057!7.76e-23!42;CL:0002032!2.21e-22!165;CL:0000837!2.21e-22!165;CL:0000860!6.08e-22!45;CL:0000988!1.40e-21!182;CL:0000766!5.25e-21!76;CL:0002031!1.42e-20!124;CL:0000763!4.67e-14!112;CL:0000049!4.67e-14!112;CL:0000557!1.02e-13!71;CL:0002009!1.10e-13!65;CL:0002194!2.22e-13!63;CL:0000576!2.22e-13!63;CL:0000040!2.22e-13!63;CL:0000559!2.22e-13!63;CL:0000839!4.54e-13!70;CL:0000094!1.93e-12!8;CL:0002393!1.20e-09!9;CL:0002397!1.20e-09!9;CL:0000081!1.98e-08!11;CL:0000542!2.99e-08!53;CL:0000051!2.99e-08!53;CL:0000838!1.03e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.97e-53;8!CL:0000081;1.74e-38;11!CL:0000775;2.61e-27;3!CL:0000771;6.42e-19;2!CL:0002393;1.15e-13;6!CL:0002397;1.15e-13;6!CL:0000767;1.89e-12;3!CL:0000236;3.54e-11;13!CL:0000766;1.49e-09;69!CL:0002087;5.36e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.46e-53,8;CL:0000081,1.89e-38,11;CL:0000738,1.76e-27,136;CL:0000775,2.50e-27,3;CL:0000037,1.15e-21,168;CL:0000766,5.74e-21,72;CL:0002032,1.90e-20,161;CL:0000837,1.90e-20,161;CL:0000988,2.10e-20,177;CL:0000771,6.43e-19,2;CL:0002087,3.25e-14,115;CL:0000763,2.95e-13,108;CL:0000049,2.95e-13,108;CL:0000767,2.12e-12,3;CL:0002031,1.33e-11,120;CL:0000236,2.04e-10,14;CL:0000860,2.49e-09,42;CL:0002057,2.49e-09,42;CL:0002393,2.56e-09,9;CL:0002397,2.56e-09,9;CL:0000134,1.61e-08,354;CL:0002320,2.76e-08,361;CL:0000473,4.54e-08,48;CL:0000234,4.54e-08,48;CL:0000219,1.85e-07,386;CL:0000838,1.91e-07,52;CL:0000542,2.72e-07,53;CL:0000051,2.72e-07,53;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.97e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.00e-11!86;UBERON:0002371!5.24e-11!80;UBERON:0002390!4.28e-09!102;UBERON:0003061!4.28e-09!102;UBERON:0004765!4.60e-08!101;UBERON:0001434!4.60e-08!101;UBERON:0002193!4.82e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.76e-08,371 | |||
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| ||
|short_description=p8@RPGR | |short_description=p8@RPGR | ||
}} | }} |
Latest revision as of 23:56, 24 September 2015
Short description: | p8@RPGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RPGR_5end |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | 0bp_to_ENST00000482855_5end |
EntrezGene: | RPGR |
HGNC: | 10295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.46e-53 | 8 |
blood cell | 1.89e-38 | 11 |
leukocyte | 1.76e-27 | 136 |
neutrophil | 2.50e-27 | 3 |
hematopoietic stem cell | 1.15e-21 | 168 |
myeloid leukocyte | 5.74e-21 | 72 |
hematopoietic oligopotent progenitor cell | 1.90e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-20 | 161 |
hematopoietic cell | 2.10e-20 | 177 |
eosinophil | 6.43e-19 | 2 |
nongranular leukocyte | 3.25e-14 | 115 |
myeloid cell | 2.95e-13 | 108 |
common myeloid progenitor | 2.95e-13 | 108 |
basophil | 2.12e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 1.33e-11 | 120 |
B cell | 2.04e-10 | 14 |
classical monocyte | 2.49e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-09 | 42 |
intermediate monocyte | 2.56e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.56e-09 | 9 |
mesenchymal cell | 1.61e-08 | 354 |
connective tissue cell | 2.76e-08 | 361 |
defensive cell | 4.54e-08 | 48 |
phagocyte | 4.54e-08 | 48 |
motile cell | 1.85e-07 | 386 |
lymphoid lineage restricted progenitor cell | 1.91e-07 | 52 |
lymphocyte | 2.72e-07 | 53 |
common lymphoid progenitor | 2.72e-07 | 53 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.76e-08 | 371 |