FFCP PHASE1:Hg19::chr14:81421921..81421989,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:81421921..81421989,+
|short_description=p1@TSHR
|description=CAGE_peak_1_at_TSHR_5end
|association_with_transcript=0bp_to_ENST00000553763,ENST00000555326_...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7253 | |EntrezGene=7253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |HGNC=12373 | ||
|TSSclassifier=strong | |||
|UniProt=G3V381 | |UniProt=G3V381 | ||
|association_with_transcript=0bp_to_ENST00000553763,ENST00000555326_5end | |||
|cluster_id=chr14:81421921..81421989,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_1_at_TSHR_5end | |||
|id=chr14:81421921..81421989,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;9.23e-11;5!CL:0000084;9.71e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.05e-11,5;CL:0000084,9.07e-08,25;CL:0000827,9.07e-08,25;CL:0000838,2.08e-07,52;CL:0000542,3.05e-07,53;CL:0000051,3.05e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.50e-08;3!UBERON:0005425;6.88e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.59e-07;1!DOID:0070004;2.59e-07;1!DOID:0060060;3.60e-07;1!DOID:0060061;3.60e-07;1!DOID:8691;3.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.67e-07,1;DOID:0070004,2.67e-07,1;DOID:0060060,3.20e-07,1;DOID:0060061,3.20e-07,1;DOID:8691,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-12!115;UBERON:0001049!2.01e-11!57;UBERON:0005068!2.01e-11!57;UBERON:0006241!2.01e-11!57;UBERON:0007135!2.01e-11!57;UBERON:0002616!1.22e-09!59;UBERON:0002780!1.49e-07!41;UBERON:0001890!1.49e-07!41;UBERON:0006240!1.49e-07!41;UBERON:0003080!2.82e-07!42;UBERON:0000955!3.43e-07!69;UBERON:0006238!3.43e-07!69;UBERON:0004732!6.50e-07!13;UBERON:0003075!8.34e-07!86;UBERON:0007284!8.34e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.58e-13;2!UBERON:0002370;3.48e-13;2!UBERON:0005058;3.48e-13;2!UBERON:0009113;3.48e-13;2!UBERON:0003127;1.44e-12;2!UBERON:0005631;3.34e-09;10!UBERON:0000158;3.34e-09;10!UBERON:0000305;8.06e-08;7!UBERON:0007029;6.88e-07;1!UBERON:0000941;6.88e-07;1!UBERON:0001785;6.88e-07;1!UBERON:0002464;6.88e-07;1!UBERON:0004904;6.88e-07;1!UBERON:0001021;6.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.58e-13,2;UBERON:0003127,9.00e-13,2;UBERON:0000974,5.81e-10,10;UBERON:0009722,4.25e-09,11;UBERON:0007690,4.25e-09,11;UBERON:0008814,3.82e-08,18;UBERON:0000305,6.67e-08,7;UBERON:0002370,5.30e-07,4;UBERON:0005058,5.30e-07,4;UBERON:0009113,5.30e-07,4;UBERON:0003295,5.30e-07,4;UBERON:0005562,5.30e-07,4;UBERON:0004871,5.74e-07,8;UBERON:0007029,6.49e-07,1;UBERON:0000941,6.88e-07,1;UBERON:0001785,6.88e-07,1;UBERON:0002464,6.88e-07,1;UBERON:0004904,6.88e-07,1;UBERON:0001021,6.88e-07,1;UBERON:0003902,6.88e-07,1;UBERON:0005425,6.88e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,2.19418305034661,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.445641827540694,1.47302953737419,1.55073726208535,2.97884250141517,0.896639238079726,0.390178042679635,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2804704678058,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,3.91280138416278,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.67121139316383,1.48482340416319,2.15012491469462,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,12.2631957834884,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,1.72022758707021,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,2.99981093782395,0,5.68309432880692,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0,1.07140367175657,0,0,0.227662191351298,0.620916591138472,0,0,0.135939465953663,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,2.14429632529969,0,0,0.869291361512897,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0,0.329821550236287,0,0.0771741581079447,0,0,0,0,0,0,5.9171801861676,0,0,0.193373663920732,0,0,0,0,0,0,0,0.788857810965923,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,34.5439050679589,160.693491238025,31.0672656311189,22.719345432284,0,385.765426323957,339.152643071892,0.435433495793923,1.36893320434112,0.0673520530145875,1.72133292942423,7.65118820055831,0,0.106727345877715,0,0,0,0,0,0,3.42165449104745,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,2.19418305034661,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.445641827540694,1.47302953737419,1.55073726208535,2.97884250141517,0.896639238079726,0.390178042679635,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2804704678058,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,3.91280138416278,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.67121139316383,1.48482340416319,2.15012491469462,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,12.2631957834884,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,1.72022758707021,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,2.99981093782395,0,5.68309432880692,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0,1.07140367175657,0,0,0.227662191351298,0.620916591138472,0,0,0.135939465953663,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,2.14429632529969,0,0,0.869291361512897,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0,0.329821550236287,0,0.0771741581079447,0,0,0,0,0,0,5.9171801861676,0,0,0.193373663920732,0,0,0,0,0,0,0,0.788857810965923,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,34.5439050679589,160.693491238025,31.0672656311189,22.719345432284,0,385.765426323957,339.152643071892,0.435433495793923,1.36893320434112,0.0673520530145875,1.72133292942423,7.65118820055831,0,0.106727345877715,0,0,0,0,0,0,3.42165449104745,0 | ||
|short_description=p1@TSHR | |||
}} | }} |
Latest revision as of 07:56, 16 September 2015
Short description: | p1@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSHR_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 0bp_to_ENST00000553763, ENST00000555326_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | G3V381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.05e-11 | 5 |
T cell | 9.07e-08 | 25 |
pro-T cell | 9.07e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.08e-07 | 52 |
lymphocyte | 3.05e-07 | 53 |
common lymphoid progenitor | 3.05e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
throat | 2.58e-13 | 2 |
open tracheal system trachea | 9.00e-13 | 2 |
neck | 5.81e-10 | 10 |
entire pharyngeal arch endoderm | 4.25e-09 | 11 |
early pharyngeal endoderm | 4.25e-09 | 11 |
pharyngeal arch system | 3.82e-08 | 18 |
amnion | 6.67e-08 | 7 |
thymus | 5.30e-07 | 4 |
hemolymphoid system gland | 5.30e-07 | 4 |
thymic region | 5.30e-07 | 4 |
pharyngeal gland | 5.30e-07 | 4 |
thymus primordium | 5.30e-07 | 4 |
somatic layer of lateral plate mesoderm | 5.74e-07 | 8 |
surface | 6.49e-07 | 1 |
cranial nerve II | 6.88e-07 | 1 |
cranial nerve | 6.88e-07 | 1 |
nerve trunk | 6.88e-07 | 1 |
nerve connecting eye with brain | 6.88e-07 | 1 |
nerve | 6.88e-07 | 1 |
retinal neural layer | 6.88e-07 | 1 |
presumptive neural retina | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.67e-07 | 1 |
myeloma | 2.67e-07 | 1 |
non-Hodgkin lymphoma | 3.20e-07 | 1 |
cutaneous T cell lymphoma | 3.20e-07 | 1 |
mycosis fungoides | 3.20e-07 | 1 |