FFCP PHASE1:Hg19::chr3:121796686..121796695,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=942 | |EntrezGene=942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1705 | |HGNC=1705 | ||
|TSSclassifier=strong | |||
|UniProt=A8K632,P42081 | |UniProt=A8K632,P42081 | ||
|association_with_transcript=0bp_to_ENST00000483949,NM_006889,NM_176892_5end | |association_with_transcript=0bp_to_ENST00000483949,NM_006889,NM_176892_5end | ||
|cluster_id=chr3:121796686..121796695,+ | |||
|coexpression_cluster_id=C1185 | |||
|description=CAGE_peak_6_at_CD86_5end | |description=CAGE_peak_6_at_CD86_5end | ||
|id=chr3:121796686..121796695,+ | |id=chr3:121796686..121796695,+ | ||
|ontology_enrichment_celltype=CL:0000945!8.20e-53!24;CL:0000826!8.20e-53!24;CL:0000738!3.40e-34!140;CL:0000988!1.94e-33!182;CL:0000037!4.59e-31!172;CL:0000566!4.59e-31!172;CL:0000542!8.07e-30!53;CL:0000051!8.07e-30!53;CL:0002087!2.14e-29!119;CL:0000838!6.11e-28!52;CL:0000236!2.59e-27!14;CL:0002032!3.74e-27!165;CL:0000837!3.74e-27!165;CL:0002031!8.12e-25!124;CL:0000080!2.07e-16!6;CL:0000451!4.58e-14!10;CL:0000453!1.28e-13!5;CL:0000990!1.62e-13!8;CL:0000134!8.77e-09!358;CL:0002320!2.24e-08!365;CL:0000842!4.43e-08!3;CL:0000840!3.60e-07!5;CL:0001029!3.60e-07!5;CL:0000219!5.83e-07!390 | |ontology_enrichment_celltype=CL:0000945!8.20e-53!24;CL:0000826!8.20e-53!24;CL:0000738!3.40e-34!140;CL:0000988!1.94e-33!182;CL:0000037!4.59e-31!172;CL:0000566!4.59e-31!172;CL:0000542!8.07e-30!53;CL:0000051!8.07e-30!53;CL:0002087!2.14e-29!119;CL:0000838!6.11e-28!52;CL:0000236!2.59e-27!14;CL:0002032!3.74e-27!165;CL:0000837!3.74e-27!165;CL:0002031!8.12e-25!124;CL:0000080!2.07e-16!6;CL:0000451!4.58e-14!10;CL:0000453!1.28e-13!5;CL:0000990!1.62e-13!8;CL:0000134!8.77e-09!358;CL:0002320!2.24e-08!365;CL:0000842!4.43e-08!3;CL:0000840!3.60e-07!5;CL:0001029!3.60e-07!5;CL:0000219!5.83e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.91e-97;24!CL:0000236;9.23e-45;13!CL:0000542;9.70e-36;53!CL:0001014;1.14e-12;2!CL:0001016;1.14e-12;2!CL:0002087;9.62e-10;104!CL:0000738;7.34e-08;136!CL:0000946;3.61e-07;1!CL:0000786;3.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.65e-97,24;CL:0000826,6.65e-97,24;CL:0000542,3.53e-56,53;CL:0000051,3.53e-56,53;CL:0000838,3.15e-52,52;CL:0000236,2.76e-50,14;CL:0002031,3.05e-31,120;CL:0002087,2.96e-30,115;CL:0000988,1.37e-29,177;CL:0000738,2.43e-29,136;CL:0002032,4.52e-26,161;CL:0000837,4.52e-26,161;CL:0000037,9.09e-25,168;CL:0001014,1.01e-12,2;CL:0001016,1.01e-12,2;CL:0000134,6.74e-09,354;CL:0002320,1.29e-08,361;CL:0000219,1.26e-07,386;CL:0000946,4.90e-07,1;CL:0000786,4.90e-07,1;CL:0000980,4.90e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;9.70e-36;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.46e-17!10;DOID:2531!1.55e-08!51;DOID:0060083!1.55e-08!51 | |ontology_enrichment_disease=DOID:0060058!8.46e-17!10;DOID:2531!1.55e-08!51;DOID:0060083!1.55e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.21e-15;10!DOID:0060060;1.07e-07;1!DOID:0060061;1.07e-07;1!DOID:8691;1.07e-07;1!DOID:630;1.29e-07;1!DOID:0050177;1.29e-07;1!DOID:4960;1.29e-07;1!DOID:0070004;1.29e-07;1!DOID:0050427;1.29e-07;1!DOID:12603;1.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.49e-15,10;DOID:2531,2.26e-08,51;DOID:0060083,2.26e-08,51;DOID:0060060,1.10e-07,1;DOID:0060061,1.10e-07,1;DOID:8691,1.10e-07,1;DOID:630,1.25e-07,1;DOID:0050177,1.25e-07,1;DOID:0050427,1.25e-07,1;DOID:4960,1.33e-07,1;DOID:0070004,1.33e-07,1;DOID:12603,1.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.38e-15!112;UBERON:0002390!4.70e-15!102;UBERON:0003061!4.70e-15!102;UBERON:0000178!2.71e-13!15;UBERON:0000179!2.71e-13!15;UBERON:0000463!2.71e-13!15;UBERON:0004177!3.77e-09!7;UBERON:0002106!7.66e-09!3;UBERON:0004854!7.66e-09!3;UBERON:0009034!7.66e-09!3;UBERON:0002095!7.66e-09!3;UBERON:0004782!7.66e-09!3;UBERON:0003281!7.66e-09!3;UBERON:0009664!7.66e-09!3;UBERON:0002296!7.66e-09!3;UBERON:0005602!7.66e-09!3;UBERON:0001179!7.66e-09!3;UBERON:0006293!7.66e-09!3;UBERON:0002384!7.96e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.11e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,3.28402357799783,2.51874500203774,0,0,0.154816123316076,0,0,0,2.47895041856965,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0,0,0,1.21079900526674,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,1.75996244461323,2.73069305631066,3.55803701545422,5.9742231159311,6.4063357925762,2.87376219977242,1.98313461835459,1.90810750907073,2.27685187643779,0,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.384273959177026,0.910415432919148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0,0,0,0.79312517629427,0,0,0,2.60124445176006,0,0,0,2.79411120005943,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,2.58478091468246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,10.971281761183,7.66096421468318,8.04049011192006,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,1.799791132412,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.790446527591777,4.74991133685494,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,0.490696182767533,0,0,0,4.39972270880846,0.106691729694141,3.44429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845855261818682,0.193373663920732,6.39623397919545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,3.52625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,3.28402357799783,2.51874500203774,0,0,0.154816123316076,0,0,0,2.47895041856965,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0,0,0,1.21079900526674,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,1.75996244461323,2.73069305631066,3.55803701545422,5.9742231159311,6.4063357925762,2.87376219977242,1.98313461835459,1.90810750907073,2.27685187643779,0,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.384273959177026,0.910415432919148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0,0,0,0.79312517629427,0,0,0,2.60124445176006,0,0,0,2.79411120005943,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,2.58478091468246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,10.971281761183,7.66096421468318,8.04049011192006,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,1.799791132412,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.790446527591777,4.74991133685494,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,0.490696182767533,0,0,0,4.39972270880846,0.106691729694141,3.44429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845855261818682,0.193373663920732,6.39623397919545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,3.52625341533556 | ||
|short_description=p6@CD86 | |short_description=p6@CD86 | ||
}} | }} |
Latest revision as of 23:15, 19 September 2015
Short description: | p6@CD86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD86_5end |
Coexpression cluster: | C1185_splenic_myeloma_lymphoma_immature_acute_CD19_Burkitt |
Association with transcript: | 0bp_to_ENST00000483949, NM_006889, NM_176892_5end |
EntrezGene: | CD86 |
HGNC: | 1705 |
UniProt: | A8K632P42081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.65e-97 | 24 |
pro-B cell | 6.65e-97 | 24 |
lymphocyte | 3.53e-56 | 53 |
common lymphoid progenitor | 3.53e-56 | 53 |
lymphoid lineage restricted progenitor cell | 3.15e-52 | 52 |
B cell | 2.76e-50 | 14 |
hematopoietic lineage restricted progenitor cell | 3.05e-31 | 120 |
nongranular leukocyte | 2.96e-30 | 115 |
hematopoietic cell | 1.37e-29 | 177 |
leukocyte | 2.43e-29 | 136 |
hematopoietic oligopotent progenitor cell | 4.52e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.52e-26 | 161 |
hematopoietic stem cell | 9.09e-25 | 168 |
CD1a-positive Langerhans cell | 1.01e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.01e-12 | 2 |
mesenchymal cell | 6.74e-09 | 354 |
connective tissue cell | 1.29e-08 | 361 |
motile cell | 1.26e-07 | 386 |
antibody secreting cell | 4.90e-07 | 1 |
plasma cell | 4.90e-07 | 1 |
plasmablast | 4.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.11e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.49e-15 | 10 |
hematologic cancer | 2.26e-08 | 51 |
immune system cancer | 2.26e-08 | 51 |
non-Hodgkin lymphoma | 1.10e-07 | 1 |
cutaneous T cell lymphoma | 1.10e-07 | 1 |
mycosis fungoides | 1.10e-07 | 1 |
genetic disease | 1.25e-07 | 1 |
monogenic disease | 1.25e-07 | 1 |
xeroderma pigmentosum | 1.25e-07 | 1 |
bone marrow cancer | 1.33e-07 | 1 |
myeloma | 1.33e-07 | 1 |
acute leukemia | 1.83e-07 | 1 |