FFCP PHASE1:Hg19::chrX:2746962..2746988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8908 | |EntrezGene=8908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4700 | |HGNC=4700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000522988_5end | |association_with_transcript=-3bp_to_ENST00000522988_5end | ||
|cluster_id=chrX:2746962..2746988,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_GYG2_5end | |description=CAGE_peak_1_at_GYG2_5end | ||
|id=chrX:2746962..2746988,+ | |id=chrX:2746962..2746988,+ | ||
|ontology_enrichment_celltype=CL:0000325!1.67e-11!39;CL:0000147!3.62e-09!14;CL:0000133!3.85e-09!59;CL:0000055!1.10e-08!180;CL:0000148!9.52e-08!10;CL:0000541!9.52e-08!10;CL:0000333!2.33e-07!41;CL:0000136!2.79e-07!15 | |ontology_enrichment_celltype=CL:0000325!1.67e-11!39;CL:0000147!3.62e-09!14;CL:0000133!3.85e-09!59;CL:0000055!1.10e-08!180;CL:0000148!9.52e-08!10;CL:0000541!9.52e-08!10;CL:0000333!2.33e-07!41;CL:0000136!2.79e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000147;2.16e-10;14!CL:0000136;8.86e-10;13!CL:0000148;9.52e-09;10!CL:0000075;2.19e-07;27!CL:0000710;3.61e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,2.27e-10,14;CL:0000133,2.34e-10,59;CL:0000148,9.95e-09,10;CL:0000541,9.95e-09,10;CL:0000136,2.08e-08,15;CL:0000333,4.32e-08,41;CL:0000075,1.63e-07,27;CL:0000710,2.79e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.01e-08!22;DOID:2994!1.01e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.83e-09;22!DOID:2994;1.83e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.35e-09,22;DOID:2994,1.35e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.68e-24!86;UBERON:0000073!5.07e-23!94;UBERON:0001016!5.07e-23!94;UBERON:0002346!1.80e-22!90;UBERON:0001017!2.37e-22!82;UBERON:0003075!1.40e-21!86;UBERON:0007284!1.40e-21!86;UBERON:0000033!3.32e-19!123;UBERON:0000955!8.35e-19!69;UBERON:0006238!8.35e-19!69;UBERON:0000924!9.91e-18!173;UBERON:0006601!9.91e-18!173;UBERON:0000153!1.66e-17!129;UBERON:0007811!1.66e-17!129;UBERON:0004121!7.14e-17!169;UBERON:0001049!1.53e-16!57;UBERON:0005068!1.53e-16!57;UBERON:0006241!1.53e-16!57;UBERON:0007135!1.53e-16!57;UBERON:0000475!6.68e-16!365;UBERON:0002616!1.68e-15!59;UBERON:0003056!3.88e-15!61;UBERON:0000481!3.75e-10!347;UBERON:0003080!5.61e-10!42;UBERON:0002780!2.05e-09!41;UBERON:0001890!2.05e-09!41;UBERON:0006240!2.05e-09!41;UBERON:0002020!4.22e-09!34;UBERON:0003528!4.22e-09!34;UBERON:0001893!1.33e-08!34;UBERON:0002791!1.58e-08!33;UBERON:0003076!1.69e-08!15;UBERON:0003057!1.69e-08!15;UBERON:0000119!2.75e-08!312;UBERON:0000483!3.74e-08!309;UBERON:0001869!9.86e-08!32;UBERON:0007023!1.16e-07!115;UBERON:0000025!2.80e-07!194;UBERON:0001456!5.27e-07!21;UBERON:0000064!5.71e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.38e-09;53!UBERON:0002616;2.38e-09;53!UBERON:0001017;1.08e-08;75!UBERON:0000955;3.74e-08;68!UBERON:0003528;4.06e-08;34!UBERON:0002020;4.06e-08;34!UBERON:0001893;7.77e-08;34!UBERON:0002107;9.47e-08;19!UBERON:0006925;9.47e-08;19!UBERON:0001456;1.03e-07;21!UBERON:0002791;1.11e-07;32!UBERON:0004733;1.13e-07;12!UBERON:0002028;1.13e-07;12!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0001016;1.26e-07;83!UBERON:0000970;2.20e-07;20!UBERON:0001869;2.51e-07;32!UBERON:0000019;3.47e-07;19!UBERON:0000047;3.47e-07;19!UBERON:0004088;3.47e-07;19!UBERON:0010230;3.47e-07;19 | |||
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| ||
|short_description=p1@GYG2 | |short_description=p1@GYG2 | ||
}} | }} |
Latest revision as of 19:38, 24 September 2015
Short description: | p1@GYG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GYG2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -3bp_to_ENST00000522988_5end |
EntrezGene: | GYG2 |
HGNC: | 4700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 2.27e-10 | 14 |
neurectodermal cell | 2.34e-10 | 59 |
melanocyte | 9.95e-09 | 10 |
melanoblast | 9.95e-09 | 10 |
fat cell | 2.08e-08 | 15 |
migratory neural crest cell | 4.32e-08 | 41 |
columnar/cuboidal epithelial cell | 1.63e-07 | 27 |
neurecto-epithelial cell | 2.79e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.35e-09 | 22 |
germ cell cancer | 1.35e-09 | 22 |