FFCP PHASE1:Hg19::chr3:119188142..119188154,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55254 | |EntrezGene=55254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25600 | |HGNC=25600 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUZ6 | |UniProt=C9JUZ6 | ||
|association_with_transcript=-465bp_to_ENST00000497993_5end | |association_with_transcript=-465bp_to_ENST00000497993_5end | ||
|cluster_id=chr3:119188142..119188154,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_6_at_TMEM39A_5end | |description=CAGE_peak_6_at_TMEM39A_5end | ||
|id=chr3:119188142..119188154,- | |id=chr3:119188142..119188154,- | ||
|ontology_enrichment_celltype=CL:0000738!5.74e-20!140;CL:0000988!1.41e-15!182;CL:0002087!1.71e-15!119;CL:0000037!3.02e-15!172;CL:0000566!3.02e-15!172;CL:0002031!3.34e-15!124;CL:0002032!2.43e-13!165;CL:0000837!2.43e-13!165;CL:0002057!2.12e-12!42;CL:0000860!4.02e-11!45;CL:0000557!3.36e-09!71;CL:0002009!4.84e-09!65;CL:0000453!5.23e-09!5;CL:0000451!9.20e-09!10;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000839!1.48e-07!70;CL:0000766!4.59e-07!76;CL:0000838!5.77e-07!52;CL:0000763!8.00e-07!112;CL:0000049!8.00e-07!112 | |ontology_enrichment_celltype=CL:0000738!5.74e-20!140;CL:0000988!1.41e-15!182;CL:0002087!1.71e-15!119;CL:0000037!3.02e-15!172;CL:0000566!3.02e-15!172;CL:0002031!3.34e-15!124;CL:0002032!2.43e-13!165;CL:0000837!2.43e-13!165;CL:0002057!2.12e-12!42;CL:0000860!4.02e-11!45;CL:0000557!3.36e-09!71;CL:0002009!4.84e-09!65;CL:0000453!5.23e-09!5;CL:0000451!9.20e-09!10;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000839!1.48e-07!70;CL:0000766!4.59e-07!76;CL:0000838!5.77e-07!52;CL:0000763!8.00e-07!112;CL:0000049!8.00e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0001014;7.66e-18;2!CL:0001016;7.66e-18;2!CL:0000860;8.59e-17;33!CL:0002057;8.59e-17;33!CL:0000453;1.99e-15;5!CL:0000473;9.39e-12;39!CL:0000234;9.39e-12;39!CL:0000623;1.77e-11;3!CL:0000576;4.03e-09;48!CL:0000990;8.47e-09;8!CL:0000766;1.59e-08;69!CL:0002087;3.42e-08;104!CL:0000451;2.80e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.68e-18,2;CL:0001016,7.68e-18,2;CL:0000860,1.01e-17,42;CL:0002057,1.01e-17,42;CL:0002009,7.44e-17,61;CL:0002031,3.43e-16,120;CL:0000738,7.48e-16,136;CL:0000453,1.53e-15,5;CL:0000473,2.62e-15,48;CL:0000234,2.62e-15,48;CL:0000557,3.49e-15,67;CL:0000988,1.34e-14,177;CL:0002032,1.36e-14,161;CL:0000837,1.36e-14,161;CL:0000037,7.55e-14,168;CL:0002087,7.78e-13,115;CL:0000763,4.36e-12,108;CL:0000049,4.36e-12,108;CL:0002194,6.31e-12,59;CL:0000576,6.31e-12,59;CL:0000040,6.31e-12,59;CL:0000559,6.31e-12,59;CL:0000623,3.71e-11,3;CL:0000825,3.71e-11,3;CL:0000839,1.63e-10,66;CL:0000766,1.62e-09,72;CL:0000990,7.33e-09,8;CL:0000451,2.49e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.19e-09!102;UBERON:0003061!9.19e-09!102;UBERON:0002193!3.04e-08!112;UBERON:0002371!2.52e-07!80;UBERON:0001474!6.27e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!9.19e-09!102;UBERON:0003061!9.19e-09!102;UBERON:0002193!3.04e-08!112;UBERON:0002371!2.52e-07!80;UBERON:0001474!6.27e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-13,76;UBERON:0001474,4.63e-12,82;UBERON:0002390,1.47e-11,98;UBERON:0003061,1.47e-11,98;UBERON:0004765,8.12e-11,90;UBERON:0002405,2.10e-10,93;UBERON:0002193,2.75e-10,108;UBERON:0001434,1.54e-09,100 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.284338464974843,0,0.553995408531877,0.601633342410425,1.30206522429511,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.945928919554341,2.06847408441971,3.87290810150296,1.35426486594342,0,0,0.224723484445085,2.14258724659632,2.24650318953266,3.83602275479425,0,0,0,0.580418477257168,1.13477044938228,0,0,0,0.217188844705117,0,3.31449872388808,1.89877432464531,0,0,0.419317291016752,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0,0,0,0,0.382273228125229,1.32171328579026,1.12101712596307,0,0.983548850569165,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,0.80642697289893,1.87208137048455,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.766765358330422,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,1.07813787429759,1.02674429023799,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.431428401637234,0,0.606255142892519,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,10.8232861978435,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0.275078873194468,0,11.9236162522295,8.51182150013745,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,1.08803560673895,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,1.7537427795545,0.930053882193542,0.654261577023377,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0,0,0,0,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0.404234377916439,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p6@TMEM39A | |short_description=p6@TMEM39A | ||
}} | }} |
Latest revision as of 20:03, 19 September 2015
Short description: | p6@TMEM39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM39A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -465bp_to_ENST00000497993_5end |
EntrezGene: | TMEM39A |
HGNC: | 25600 |
UniProt: | C9JUZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.68e-18 | 2 |
immature CD1a-positive Langerhans cell | 7.68e-18 | 2 |
classical monocyte | 1.01e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-17 | 42 |
macrophage dendritic cell progenitor | 7.44e-17 | 61 |
hematopoietic lineage restricted progenitor cell | 3.43e-16 | 120 |
leukocyte | 7.48e-16 | 136 |
Langerhans cell | 1.53e-15 | 5 |
defensive cell | 2.62e-15 | 48 |
phagocyte | 2.62e-15 | 48 |
granulocyte monocyte progenitor cell | 3.49e-15 | 67 |
hematopoietic cell | 1.34e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.36e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-14 | 161 |
hematopoietic stem cell | 7.55e-14 | 168 |
nongranular leukocyte | 7.78e-13 | 115 |
myeloid cell | 4.36e-12 | 108 |
common myeloid progenitor | 4.36e-12 | 108 |
monopoietic cell | 6.31e-12 | 59 |
monocyte | 6.31e-12 | 59 |
monoblast | 6.31e-12 | 59 |
promonocyte | 6.31e-12 | 59 |
natural killer cell | 3.71e-11 | 3 |
pro-NK cell | 3.71e-11 | 3 |
myeloid lineage restricted progenitor cell | 1.63e-10 | 66 |
myeloid leukocyte | 1.62e-09 | 72 |
conventional dendritic cell | 7.33e-09 | 8 |
dendritic cell | 2.49e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.65e-13 | 76 |
bone element | 4.63e-12 | 82 |
hematopoietic system | 1.47e-11 | 98 |
blood island | 1.47e-11 | 98 |
skeletal element | 8.12e-11 | 90 |
immune system | 2.10e-10 | 93 |
hemolymphoid system | 2.75e-10 | 108 |
skeletal system | 1.54e-09 | 100 |