FFCP PHASE1:Hg19::chrX:19587599..19587612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010nfm.2_5end | |association_with_transcript=0bp_to_uc010nfm.2_5end | ||
|cluster_id=chrX:19587599..19587612,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_15_at_SH3KBP1_5end | |description=CAGE_peak_15_at_SH3KBP1_5end | ||
|id=chrX:19587599..19587612,- | |id=chrX:19587599..19587612,- | ||
|ontology_enrichment_celltype=CL:0000181!5.88e-07!12;CL:0000417!5.88e-07!12;CL:0000668!5.88e-07!12;CL:0000414!5.88e-07!12;CL:0000412!5.88e-07!12;CL:0000182!5.88e-07!12 | |ontology_enrichment_celltype=CL:0000181!5.88e-07!12;CL:0000417!5.88e-07!12;CL:0000668!5.88e-07!12;CL:0000414!5.88e-07!12;CL:0000412!5.88e-07!12;CL:0000182!5.88e-07!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.09e-24;4!UBERON:0007284;4.09e-24;4!UBERON:0010226;2.78e-12;1!UBERON:0010227;3.27e-12;1!UBERON:0004140;4.53e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0004874;1.55e-11;1!UBERON:0003104;5.58e-08;31!UBERON:0006603;4.65e-07;65 | |||
|ontology_enrichment_disease=DOID:114!5.16e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.00e-22;2!DOID:178;9.61e-12;1!DOID:326;9.61e-12;1!DOID:3978;9.61e-12;1!DOID:3394;9.61e-12;1!DOID:5844;9.61e-12;1!DOID:1287;1.29e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.85e-22,2;DOID:178,9.61e-12,1;DOID:326,9.61e-12,1;DOID:3978,9.61e-12,1;DOID:3394,9.61e-12,1;DOID:5844,9.61e-12,1;DOID:1287,1.26e-11,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;3.13e-33;25!UBERON:0004151;1.95e-32;3!UBERON:0003978;6.62e-32;3!UBERON:0000946;6.62e-32;3!UBERON:0002081;5.70e-22;2!UBERON:0000341;6.01e-22;2!UBERON:0002133;1.33e-21;2!UBERON:0000948;5.14e-17;22!UBERON:0001723;8.08e-15;3!UBERON:0001033;8.08e-15;3!UBERON:0002084;2.78e-12;1!UBERON:0002082;2.78e-12;1!UBERON:0002079;3.27e-12;1!UBERON:0002146;4.06e-12;1!UBERON:0005623;4.06e-12;1!UBERON:0002426;5.62e-12;1!UBERON:0003831;5.62e-12;1!UBERON:0003898;5.62e-12;1!UBERON:0004830;5.62e-12;1!UBERON:0003830;5.62e-12;1!UBERON:0005175;5.62e-12;1!UBERON:0001774;5.62e-12;1!UBERON:0001103;5.62e-12;1!UBERON:0002135;7.76e-12;1!UBERON:0000989;1.55e-11;1!UBERON:0002134;1.55e-11;1!UBERON:0008811;1.55e-11;1!UBERON:0005208;1.55e-11;1!UBERON:0004145;1.55e-11;1!UBERON:0005946;1.55e-11;1!UBERON:0005965;1.55e-11;1!UBERON:0002078;1.55e-11;1!UBERON:0010313;5.20e-10;10!UBERON:0000974;6.16e-08;6!UBERON:0003103;1.35e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.17e-32,3;UBERON:0003978,7.76e-32,3;UBERON:0009751,7.76e-32,3;UBERON:0000946,7.76e-32,3;UBERON:0002523,7.76e-32,3;UBERON:0005983,7.76e-32,3;UBERON:0002165,7.76e-32,3;UBERON:0002062,7.76e-32,3;UBERON:0007280,7.76e-32,3;UBERON:0007100,1.14e-30,27;UBERON:0000341,6.01e-22,2;UBERON:0002081,6.01e-22,2;UBERON:0010227,6.01e-22,2;UBERON:0002133,1.56e-21,2;UBERON:0003103,1.29e-20,68;UBERON:0000948,1.51e-15,24;UBERON:0005498,1.51e-15,24;UBERON:0004140,1.51e-15,24;UBERON:0009881,1.51e-15,24;UBERON:0004141,1.51e-15,24;UBERON:0003084,1.51e-15,24;UBERON:0007005,1.51e-15,24;UBERON:0004139,1.51e-15,24;UBERON:0004291,1.51e-15,24;UBERON:0001723,8.08e-15,3;UBERON:0001033,8.08e-15,3;UBERON:0010056,8.08e-15,3;UBERON:0004797,4.97e-14,7;UBERON:0002084,2.93e-12,1;UBERON:0002082,2.93e-12,1;UBERON:0010226,2.93e-12,1;UBERON:0002079,3.27e-12,1;UBERON:0002146,4.06e-12,1;UBERON:0005623,4.06e-12,1;UBERON:0002426,5.62e-12,1;UBERON:0003831,5.62e-12,1;UBERON:0003898,5.62e-12,1;UBERON:0004830,5.62e-12,1;UBERON:0003830,5.62e-12,1;UBERON:0005175,5.62e-12,1;UBERON:0001774,5.62e-12,1;UBERON:0001103,5.62e-12,1;UBERON:0010084,5.62e-12,1;UBERON:0002135,8.64e-12,1;UBERON:0000989,1.32e-11,1;UBERON:0008811,1.32e-11,1;UBERON:0006258,1.32e-11,1;UBERON:0005876,1.32e-11,1;UBERON:0004874,1.32e-11,1;UBERON:0007023,1.51e-11,114;UBERON:0002134,1.63e-11,1;UBERON:0005208,1.63e-11,1;UBERON:0005946,1.63e-11,1;UBERON:0005965,1.63e-11,1;UBERON:0002078,1.63e-11,1;UBERON:0010313,5.44e-10,10;UBERON:0002342,5.44e-10,10;UBERON:0005062,5.44e-10,10 | |||
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|short_description=p15@SH3KBP1 | |short_description=p15@SH3KBP1 | ||
}} | }} |
Latest revision as of 07:46, 20 September 2015
Short description: | p15@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SH3KBP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_uc010nfm.2_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.85e-22 | 2 |
vascular disease | 9.61e-12 | 1 |
ischemia | 9.61e-12 | 1 |
extrinsic cardiomyopathy | 9.61e-12 | 1 |
myocardial ischemia | 9.61e-12 | 1 |
myocardial infarction | 9.61e-12 | 1 |
cardiovascular system disease | 1.26e-11 | 4 |