FFCP PHASE1:Hg19::chr3:113557620..113557642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54762 | |EntrezGene=54762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25252 | |HGNC=25252 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000498183_5end | |association_with_transcript=-22bp_to_ENST00000498183_5end | ||
|cluster_id=chr3:113557620..113557642,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_GRAMD1C_5end | |description=CAGE_peak_4_at_GRAMD1C_5end | ||
|id=chr3:113557620..113557642,+ | |id=chr3:113557620..113557642,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002138;4.00e-09;6!CL:0002139;1.59e-08;24!CL:0000775;2.34e-08;3!CL:0000094;6.60e-08;8!CL:0000236;1.12e-07;13!CL:0002618;4.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.35e-09,6;CL:0002138,3.35e-09,6;CL:0005022,3.35e-09,6;CL:0002139,1.72e-08,24;CL:0000775,1.94e-08,3;CL:0000094,5.94e-08,8;CL:0000236,2.88e-07,14;CL:0002618,3.06e-07,3;CL:0000115,5.80e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;4.00e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.56e-22!57;UBERON:0005068!4.56e-22!57;UBERON:0006241!4.56e-22!57;UBERON:0007135!4.56e-22!57;UBERON:0002780!1.42e-18!41;UBERON:0001890!1.42e-18!41;UBERON:0006240!1.42e-18!41;UBERON:0003075!3.74e-18!86;UBERON:0007284!3.74e-18!86;UBERON:0002616!4.80e-18!59;UBERON:0003080!1.18e-17!42;UBERON:0002020!7.30e-17!34;UBERON:0003528!7.30e-17!34;UBERON:0001893!1.52e-16!34;UBERON:0002346!2.08e-16!90;UBERON:0002791!4.96e-16!33;UBERON:0007023!8.94e-16!115;UBERON:0000955!1.20e-15!69;UBERON:0006238!1.20e-15!69;UBERON:0001869!1.33e-15!32;UBERON:0005743!2.39e-14!86;UBERON:0003056!5.63e-14!61;UBERON:0001017!8.26e-14!82;UBERON:0000073!1.76e-12!94;UBERON:0001016!1.76e-12!94;UBERON:0000956!6.66e-12!25;UBERON:0000203!6.66e-12!25;UBERON:0002619!1.90e-11!22;UBERON:0000033!3.98e-11!123;UBERON:0004111!1.40e-10!241;UBERON:0000153!1.59e-10!129;UBERON:0007811!1.59e-10!129;UBERON:0000025!1.99e-10!194;UBERON:0001950!4.11e-10!20;UBERON:0000477!2.40e-09!286;UBERON:0000119!6.54e-08!312;UBERON:0000483!1.11e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!4.56e-22!57;UBERON:0005068!4.56e-22!57;UBERON:0006241!4.56e-22!57;UBERON:0007135!4.56e-22!57;UBERON:0002780!1.42e-18!41;UBERON:0001890!1.42e-18!41;UBERON:0006240!1.42e-18!41;UBERON:0003075!3.74e-18!86;UBERON:0007284!3.74e-18!86;UBERON:0002616!4.80e-18!59;UBERON:0003080!1.18e-17!42;UBERON:0002020!7.30e-17!34;UBERON:0003528!7.30e-17!34;UBERON:0001893!1.52e-16!34;UBERON:0002346!2.08e-16!90;UBERON:0002791!4.96e-16!33;UBERON:0007023!8.94e-16!115;UBERON:0000955!1.20e-15!69;UBERON:0006238!1.20e-15!69;UBERON:0001869!1.33e-15!32;UBERON:0005743!2.39e-14!86;UBERON:0003056!5.63e-14!61;UBERON:0001017!8.26e-14!82;UBERON:0000073!1.76e-12!94;UBERON:0001016!1.76e-12!94;UBERON:0000956!6.66e-12!25;UBERON:0000203!6.66e-12!25;UBERON:0002619!1.90e-11!22;UBERON:0000033!3.98e-11!123;UBERON:0004111!1.40e-10!241;UBERON:0000153!1.59e-10!129;UBERON:0007811!1.59e-10!129;UBERON:0000025!1.99e-10!194;UBERON:0001950!4.11e-10!20;UBERON:0000477!2.40e-09!286;UBERON:0000119!6.54e-08!312;UBERON:0000483!1.11e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.13e-16;41!UBERON:0001890;8.13e-16;41!UBERON:0003528;3.16e-14;34!UBERON:0002020;3.16e-14;34!UBERON:0001869;2.28e-13;32!UBERON:0002791;2.30e-13;32!UBERON:0000073;3.00e-13;53!UBERON:0002616;3.00e-13;53!UBERON:0002298;5.77e-13;6!UBERON:0001893;1.76e-12;34!UBERON:0002619;4.81e-11;22!UBERON:0000125;7.28e-11;9!UBERON:0002308;7.28e-11;9!UBERON:0000956;1.90e-09;25!UBERON:0000203;1.90e-09;25!UBERON:0000178;2.71e-09;15!UBERON:0000179;2.71e-09;15!UBERON:0000463;2.71e-09;15!UBERON:0001950;2.90e-08;20!UBERON:0002420;6.58e-08;9!UBERON:0007245;6.58e-08;9!UBERON:0010009;6.58e-08;9!UBERON:0010011;6.58e-08;9!UBERON:0000454;6.58e-08;9!UBERON:0001017;1.42e-07;75!UBERON:0001896;1.68e-07;3!UBERON:0005290;1.68e-07;3!UBERON:0009663;2.06e-07;7!UBERON:0000955;2.44e-07;68!UBERON:0000988;4.00e-07;3!UBERON:0007023;7.24e-07;114!UBERON:0001473;9.87e-07;8!UBERON:0004536;9.87e-07;8!UBERON:0006558;9.87e-07;8 | |||
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| ||
|short_description=p4@GRAMD1C | |short_description=p4@GRAMD1C | ||
}} | }} |
Latest revision as of 16:13, 19 September 2015
Short description: | p4@GRAMD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRAMD1C_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -22bp_to_ENST00000498183_5end |
EntrezGene: | GRAMD1C |
HGNC: | 25252 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.35e-09 | 6 |
endothelial cell of lymphatic vessel | 3.35e-09 | 6 |
vascular lymphangioblast | 3.35e-09 | 6 |
endothelial cell of vascular tree | 1.72e-08 | 24 |
neutrophil | 1.94e-08 | 3 |
granulocyte | 5.94e-08 | 8 |
B cell | 2.88e-07 | 14 |
endothelial cell of umbilical vein | 3.06e-07 | 3 |
endothelial cell | 5.80e-07 | 36 |