FFCP PHASE1:Hg19::chrX:154563855..154563876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1193 | |EntrezGene=1193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2063 | |HGNC=2063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000465553_5end | |association_with_transcript=-4bp_to_ENST00000465553_5end | ||
|cluster_id=chrX:154563855..154563876,- | |||
|coexpression_cluster_id=C2958 | |||
|description=CAGE_peak_2_at_CLIC2_5end | |description=CAGE_peak_2_at_CLIC2_5end | ||
|id=chrX:154563855..154563876,- | |id=chrX:154563855..154563876,- | ||
|ontology_enrichment_celltype=CL:0000839!2.07e-28!70;CL:0000557!3.05e-27!71;CL:0002009!3.40e-26!65;CL:0000763!2.88e-25!112;CL:0000049!2.88e-25!112;CL:0002057!2.95e-25!42;CL:0002194!5.31e-25!63;CL:0000576!5.31e-25!63;CL:0000040!5.31e-25!63;CL:0000559!5.31e-25!63;CL:0000766!4.19e-24!76;CL:0000860!9.16e-23!45;CL:0000037!8.21e-15!172;CL:0000566!8.21e-15!172;CL:0002032!4.25e-14!165;CL:0000837!4.25e-14!165;CL:0002031!5.06e-14!124;CL:0000738!6.43e-14!140;CL:0000988!4.83e-13!182;CL:0002087!5.25e-11!119;CL:0000451!1.54e-07!10;CL:0000990!1.61e-07!8 | |ontology_enrichment_celltype=CL:0000839!2.07e-28!70;CL:0000557!3.05e-27!71;CL:0002009!3.40e-26!65;CL:0000763!2.88e-25!112;CL:0000049!2.88e-25!112;CL:0002057!2.95e-25!42;CL:0002194!5.31e-25!63;CL:0000576!5.31e-25!63;CL:0000040!5.31e-25!63;CL:0000559!5.31e-25!63;CL:0000766!4.19e-24!76;CL:0000860!9.16e-23!45;CL:0000037!8.21e-15!172;CL:0000566!8.21e-15!172;CL:0002032!4.25e-14!165;CL:0000837!4.25e-14!165;CL:0002031!5.06e-14!124;CL:0000738!6.43e-14!140;CL:0000988!4.83e-13!182;CL:0002087!5.25e-11!119;CL:0000451!1.54e-07!10;CL:0000990!1.61e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-23;33!CL:0002057;1.00e-23;33!CL:0000473;2.14e-22;39!CL:0000234;2.14e-22;39!CL:0000576;7.54e-20;48!CL:0000766;7.39e-14;69!CL:0000763;3.00e-10;100!CL:0000990;1.46e-09;8!CL:0000451;1.61e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,9.59e-37,66;CL:0002009,6.63e-36,61;CL:0000763,1.10e-35,108;CL:0000049,1.10e-35,108;CL:0000557,2.09e-35,67;CL:0002194,2.77e-34,59;CL:0000576,2.77e-34,59;CL:0000040,2.77e-34,59;CL:0000559,2.77e-34,59;CL:0000473,3.49e-33,48;CL:0000234,3.49e-33,48;CL:0000766,4.85e-32,72;CL:0000860,5.34e-30,42;CL:0002057,5.34e-30,42;CL:0002032,1.39e-18,161;CL:0000837,1.39e-18,161;CL:0000037,2.76e-18,168;CL:0000988,1.79e-16,177;CL:0002031,3.56e-16,120;CL:0000738,4.65e-16,136;CL:0002087,5.77e-13,115;CL:0000990,1.62e-09,8;CL:0000451,2.05e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-22;42!CL:0000049;7.70e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.97e-32!102;UBERON:0003061!7.97e-32!102;UBERON:0002193!9.18e-32!112;UBERON:0007023!8.42e-28!115;UBERON:0002371!3.07e-26!80;UBERON:0001474!3.38e-22!86;UBERON:0002405!3.34e-21!115;UBERON:0004765!8.98e-17!101;UBERON:0001434!8.98e-17!101;UBERON:0003081!2.34e-13!216;UBERON:0002204!3.05e-07!167;UBERON:0000479!9.37e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.65e-39,98;UBERON:0003061,3.65e-39,98;UBERON:0002193,1.97e-38,108;UBERON:0002405,2.01e-33,93;UBERON:0002371,3.30e-32,76;UBERON:0001474,3.61e-28,82;UBERON:0004765,1.12e-23,90;UBERON:0007023,1.01e-22,114;UBERON:0001434,4.10e-21,100;UBERON:0003081,2.76e-17,203;UBERON:0000926,8.30e-11,315;UBERON:0004120,8.30e-11,315;UBERON:0006603,8.30e-11,315;UBERON:0002204,8.34e-09,167 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.687720651731561,0.656804715599566,0.944529375764151,1.96682138424452,1.53531759238885,4.95411594611443,0,0,0,0,0,0.587200878669695,9.97191735357379,10.6288557159175,7.16135873362311,19.2567307846335,17.1663642990059,23.6969522223452,6.83371722263954,10.5805264232867,3.88134497900506,10.6917356976615,25.0812411693314,13.6270803193846,9.20615655430881,17.931249457037,12.7700404139836,24.8216890130365,32.2742341791913,9.47985406160392,9.97684399575805,22.924116604859,11.4608977066993,16.5285301880287,31.7719736805333,12.7867425159808,12.5343494070952,20.7442203926497,8.09827026012119,32.5034347264014,36.3126543802329,26.1585344578141,8.79370328398601,26.5956288394303,13.2485195270121,30.8753746343018,60.3975323019606,34.8108626184973,5.70389273042243,6.59073329891635,3.14487968262564,1.23561494261145,0.600707571366025,0.32145117339416,0.855038231223746,3.38158351238453,2.00930569141097,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,7.8471198817415,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0,0.289693037921647,0,0.973269740605272,0,0,0,1.76821751921912,0,0,46.4102772926197,53.6319590881743,34.4361117743861,1.19245312152671,1.14398982156026,0.74291500265913,0.39752481473341,0,0,0,0.838998872419812,0,0.208994966536811,0.258416759169329,2.84613010149368,0,1.61131726843659,2.28081631715554,1.70843440283719,0.735326160691737,0,0.446498641420399,0.673588117878509,0.788280363383256,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,2.0078563452417,2.4826786753885,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,1.24864030732128,0,1.04614076386261,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,4.13552934676983,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,1.38895653772983,2.28304982681518,0,0,5.41677413392274,5.14809383306323,4.60756603095058,0,0,0,0,0,0,0.985326475791887,0.704387472105808,6.63449969730471,4.03535869567492,7.95327330586194,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,2.43247561282381,1.50677127429638,2.10833939483032,0,0,0,0.723906533337896,0,0,0,0.788123040807709,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,1.60091336705167,2.12189300012382,0,0.30239029332968,1.24053903909388,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0.616838775210622,1.06537035187876,2.13530605635904,0,0.697262270759755,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,78.9335555925365,70.849007227748,0,0,0,60.5881148488607,0,0,0,0,0,0.193341436584244,0,0,0,0.537101224341368,0.290033387828457,0.255679882248303,0.445160178233687,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,4.61189383291777,4.85547561184627,4.93942339439853,0,0,0,0,0,62.5114837157814,0,0,0,0,18.2681139323581,20.6452045928441,16.5197684280507,7.38518503919146,5.75907182320672,19.4541993357815,19.4411317405721,19.8281294073568,0,0,0,0,0,0,0,0,0,5.29183956809707,0,3.65036331547496,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,1.9488432172667,2.46174797895425,1.89318974933188,0,0,0.18714054040822,13.1857361344705,0,11.1443384277478,0,2.14870036263921,0,1.84296421259539,0.994147647766298,2.39138007897872,0.333926115068718,0,0,4.5827037297746,3.59169090190492,0,0.102268682502155,0.615424027305347,0,0,0,0,7.59554223404389,0,1.11136990144637,0,0.556608588971108,0,0,0,14.4999915086959,0,1.01701460117107,0,0,0.583209226766509,0,1.77148277162768,2.89431452700979,0,1.3269511191747,0.295547618953547,0.87754158861589,0,2.78847488557207,3.46276163267087,0.569710279235006,0,0,0,1.5950057986596,0.183195186803725,3.73124343213044,0,0.627921025580099,1.32969345520125,10.8285917096247,11.1755644561112,14.2648348929466,23.529462857799,1.58936578980379,0,0,0,0,0.995261931078505,3.27292988662355,4.27721101453538,1.18608451472249,0.123563938946503,0,0.202203398942031,1.60515529459758,0.234264445725339,0.182454789215666,0,0,1.18375320854817,7.25944296291983,0,4.23350083510869,0.300646838828985,0,0,0,0,0,3.41531455235751,0,0,0,0,1.57254001417827,0.343972064943233,0.0967563312890851,0,0,4.84945082442097,0,2.03382666702479,0,0.19871461170299,0.126621591911757,0,1.68333522528221,3.84215390530835,0,0,0,0,5.61813712153784,3.47907099583211,0,0.271808412147228,0.209205692624666,0.101998217636322,0,1.20084057741958,3.01191833562385,0,0,0,17.3155088788798,2.52076466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| ||
|short_description=p2@CLIC2 | |short_description=p2@CLIC2 | ||
}} | }} |
Latest revision as of 04:48, 20 September 2015
Short description: | p2@CLIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLIC2_5end |
Coexpression cluster: | C2958_migratory_Reticulocytes_Dendritic_CD14_vagina_thyroid_splenic |
Association with transcript: | -4bp_to_ENST00000465553_5end |
EntrezGene: | CLIC2 |
HGNC: | 2063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 9.59e-37 | 66 |
macrophage dendritic cell progenitor | 6.63e-36 | 61 |
myeloid cell | 1.10e-35 | 108 |
common myeloid progenitor | 1.10e-35 | 108 |
granulocyte monocyte progenitor cell | 2.09e-35 | 67 |
monopoietic cell | 2.77e-34 | 59 |
monocyte | 2.77e-34 | 59 |
monoblast | 2.77e-34 | 59 |
promonocyte | 2.77e-34 | 59 |
defensive cell | 3.49e-33 | 48 |
phagocyte | 3.49e-33 | 48 |
myeloid leukocyte | 4.85e-32 | 72 |
classical monocyte | 5.34e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.34e-30 | 42 |
hematopoietic oligopotent progenitor cell | 1.39e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-18 | 161 |
hematopoietic stem cell | 2.76e-18 | 168 |
hematopoietic cell | 1.79e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 3.56e-16 | 120 |
leukocyte | 4.65e-16 | 136 |
nongranular leukocyte | 5.77e-13 | 115 |
conventional dendritic cell | 1.62e-09 | 8 |
dendritic cell | 2.05e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.65e-39 | 98 |
blood island | 3.65e-39 | 98 |
hemolymphoid system | 1.97e-38 | 108 |
immune system | 2.01e-33 | 93 |
bone marrow | 3.30e-32 | 76 |
bone element | 3.61e-28 | 82 |
skeletal element | 1.12e-23 | 90 |
adult organism | 1.01e-22 | 114 |
skeletal system | 4.10e-21 | 100 |
lateral plate mesoderm | 2.76e-17 | 203 |
mesoderm | 8.30e-11 | 315 |
mesoderm-derived structure | 8.30e-11 | 315 |
presumptive mesoderm | 8.30e-11 | 315 |
musculoskeletal system | 8.34e-09 | 167 |