FFCP PHASE1:Hg19::chrX:153718988..153719008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8273 | |EntrezGene=8273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22979 | |HGNC=22979 | ||
|TSSclassifier=strong | |||
|UniProt=P09131,Q9BSL2 | |UniProt=P09131,Q9BSL2 | ||
|association_with_transcript=0bp_to_ENST00000263512,ENST00000393587,NM_001142391,NM_001142392,NM_019848,uc004flp.2,uc004flq.2,uc004flr.2_5end | |association_with_transcript=0bp_to_ENST00000263512,ENST00000393587,NM_001142391,NM_001142392,NM_019848,uc004flp.2,uc004flq.2,uc004flr.2_5end | ||
|cluster_id=chrX:153718988..153719008,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_SLC10A3_5end | |description=CAGE_peak_2_at_SLC10A3_5end | ||
|id=chrX:153718988..153719008,- | |id=chrX:153718988..153719008,- | ||
|ontology_enrichment_celltype=CL:0000222!8.11e-17!119;CL:0000183!3.89e-12!59;CL:0002371!1.75e-10!591;CL:0000680!4.44e-10!57;CL:0000056!4.44e-10!57;CL:0000355!4.44e-10!57;CL:0000192!7.84e-10!42;CL:0000514!7.84e-10!42;CL:0000187!8.00e-10!54;CL:0000144!6.95e-09!625;CL:0000055!1.38e-08!180;CL:0000359!7.49e-08!32;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0000548!2.87e-07!679;CL:0000004!2.87e-07!679;CL:0000255!2.87e-07!679;CL:0000012!5.86e-07!682;CL:0000393!9.68e-07!60;CL:0000211!9.68e-07!60 | |ontology_enrichment_celltype=CL:0000222!8.11e-17!119;CL:0000183!3.89e-12!59;CL:0002371!1.75e-10!591;CL:0000680!4.44e-10!57;CL:0000056!4.44e-10!57;CL:0000355!4.44e-10!57;CL:0000192!7.84e-10!42;CL:0000514!7.84e-10!42;CL:0000187!8.00e-10!54;CL:0000144!6.95e-09!625;CL:0000055!1.38e-08!180;CL:0000359!7.49e-08!32;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0000548!2.87e-07!679;CL:0000004!2.87e-07!679;CL:0000255!2.87e-07!679;CL:0000012!5.86e-07!682;CL:0000393!9.68e-07!60;CL:0000211!9.68e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000192;9.05e-08;43!CL:0000359;2.62e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.22e-17,121;CL:0000680,1.65e-10,58;CL:0000056,1.65e-10,58;CL:0000355,1.65e-10,58;CL:0000192,2.72e-10,43;CL:0000514,2.72e-10,43;CL:0000187,2.96e-10,55;CL:0000359,7.49e-08,32;CL:0000213,9.05e-08,58;CL:0000215,9.05e-08,58;CL:0000393,4.25e-07,61;CL:0000211,4.25e-07,61;CL:0002078,5.82e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;9.05e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.97e-13!113;UBERON:0000486!1.66e-12!82;UBERON:0004535!5.31e-12!110;UBERON:0004290!3.41e-11!70;UBERON:0002049!6.87e-11!79;UBERON:0007798!6.87e-11!79;UBERON:0000914!1.04e-10!83;UBERON:0002329!1.04e-10!83;UBERON:0003077!1.04e-10!83;UBERON:0003059!1.04e-10!83;UBERON:0007282!1.04e-10!83;UBERON:0009618!1.04e-10!83;UBERON:0007285!1.04e-10!83;UBERON:0002100!5.73e-10!216;UBERON:0005256!6.50e-10!143;UBERON:0000055!7.22e-10!69;UBERON:0000926!1.30e-09!448;UBERON:0004120!1.30e-09!448;UBERON:0006603!1.30e-09!448;UBERON:0001134!1.49e-09!61;UBERON:0002036!1.49e-09!61;UBERON:0003082!1.49e-09!61;UBERON:0004872!2.00e-09!84;UBERON:0002385!3.17e-09!63;UBERON:0001015!3.17e-09!63;UBERON:0000383!3.17e-09!63;UBERON:0001981!4.02e-09!60;UBERON:0007500!4.02e-09!60;UBERON:0004537!4.02e-09!60;UBERON:0006965!4.02e-09!60;UBERON:0001637!8.61e-08!42;UBERON:0003509!8.61e-08!42;UBERON:0004572!8.61e-08!42;UBERON:0003914!9.94e-08!118;UBERON:0003081!3.36e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.92e-14,78;UBERON:0000486,6.25e-13,83;UBERON:0001009,1.91e-12,112;UBERON:0000926,5.99e-12,315;UBERON:0004120,5.99e-12,315;UBERON:0006603,5.99e-12,315;UBERON:0004535,1.00e-11,109;UBERON:0002329,1.29e-11,71;UBERON:0003059,1.29e-11,71;UBERON:0007282,1.29e-11,71;UBERON:0004290,1.29e-11,71;UBERON:0009618,1.29e-11,71;UBERON:0007524,3.71e-11,73;UBERON:0003077,3.93e-11,72;UBERON:0007285,3.93e-11,72;UBERON:0002049,1.33e-10,78;UBERON:0007798,1.33e-10,78;UBERON:0002100,2.69e-10,199;UBERON:0001134,5.76e-10,62;UBERON:0002036,5.76e-10,62;UBERON:0003082,5.76e-10,62;UBERON:0003104,6.72e-10,160;UBERON:0009142,6.72e-10,160;UBERON:0002385,1.25e-09,64;UBERON:0001015,1.25e-09,64;UBERON:0000383,1.25e-09,64;UBERON:0000055,1.39e-09,68;UBERON:0004872,3.71e-09,83;UBERON:0007500,7.76e-09,59;UBERON:0001981,7.76e-09,59;UBERON:0004537,7.76e-09,59;UBERON:0006965,7.76e-09,59;UBERON:0005256,9.09e-09,122;UBERON:0001637,8.61e-08,42;UBERON:0003509,8.61e-08,42;UBERON:0004572,8.61e-08,42;UBERON:0003914,1.99e-07,117 | |||
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836789 | ||
|short_description=p2@SLC10A3 | |short_description=p2@SLC10A3 | ||
}} | }} |
Latest revision as of 03:52, 20 September 2015
Short description: | p2@SLC10A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC10A3_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000263512, ENST00000393587, NM_001142391, NM_001142392, NM_019848, uc004flp.2, uc004flq.2, uc004flr.2_5end |
EntrezGene: | SLC10A3 |
HGNC: | 22979 |
UniProt: | P09131Q9BSL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.22e-17 | 121 |
muscle precursor cell | 1.65e-10 | 58 |
myoblast | 1.65e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-10 | 58 |
smooth muscle cell | 2.72e-10 | 43 |
smooth muscle myoblast | 2.72e-10 | 43 |
muscle cell | 2.96e-10 | 55 |
vascular associated smooth muscle cell | 7.49e-08 | 32 |
lining cell | 9.05e-08 | 58 |
barrier cell | 9.05e-08 | 58 |
electrically responsive cell | 4.25e-07 | 61 |
electrically active cell | 4.25e-07 | 61 |
meso-epithelial cell | 5.82e-07 | 45 |